RNA–Protein interactions for RNA: YGR058W

PEF1, Transcript of Penta-EF-hand protein, yeastyeast

Gene PEF1, Length 1,008 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PEF1YGR058W MTC1P47018 478 aaKnown RBP16.9■□□□□ 0.3
PEF1YGR058W DRS1P32892 752 aaKnown RBP16.01■□□□□ 0.15
PEF1YGR058W FAP1P53971 965 aa15.1■□□□□ 0.01
PEF1YGR058W PRY3P47033 881 aa14.22□□□□□ -0.13
PEF1YGR058W PRI1P10363 409 aa14.16□□□□□ -0.14
PEF1YGR058W AAD16Q02895 342 aa14.02□□□□□ -0.17
PEF1YGR058W DIP2Q12220 943 aaPredicted RBP13.94□□□□□ -0.18
PEF1YGR058W RPG1P38249 964 aaKnown RBP13.88□□□□□ -0.19
PEF1YGR058W ISW2Q08773 1120 aa13.88□□□□□ -0.19
PEF1YGR058W YCK3P39962 524 aa13.56□□□□□ -0.24
PEF1YGR058W TSR3Q12094 313 aaKnown RBP13.51□□□□□ -0.25
PEF1YGR058W AVT3P36062 692 aa13.49□□□□□ -0.25
PEF1YGR058W RSE1Q04693 1361 aaKnown RBP13.38□□□□□ -0.27
PEF1YGR058W BFR2Q06631 534 aaKnown RBP13.36□□□□□ -0.27
PEF1YGR058W HAA1Q12753 694 aaKnown RBP13.15□□□□□ -0.3
PEF1YGR058W RPL17AP05740 184 aaKnown RBP13.05□□□□□ -0.32
PEF1YGR058W RPL17BP46990 184 aaKnown RBP13.05□□□□□ -0.32
PEF1YGR058W REB1P21538 810 aa12.9□□□□□ -0.34
PEF1YGR058W MRPL32P25348 183 aa12.81□□□□□ -0.36
PEF1YGR058W SPT21P35209 758 aa12.47□□□□□ -0.41
PEF1YGR058W CDC27P38042 758 aa12.38□□□□□ -0.43
PEF1YGR058W YKR023WP36119 530 aaKnown RBP12.34□□□□□ -0.43
PEF1YGR058W YGL015CP33199 130 aa12.18□□□□□ -0.46
PEF1YGR058W DCD1P06773 312 aa12.17□□□□□ -0.46
PEF1YGR058W HOP09932 586 aa12.15□□□□□ -0.46
PEF1YGR058W TFC8Q12308 588 aa12.03□□□□□ -0.48
PEF1YGR058W RIM101P33400 625 aa12.02□□□□□ -0.49
PEF1YGR058W MAP2P38174 421 aaKnown RBP11.94□□□□□ -0.5
PEF1YGR058W TFA1P36100 482 aa11.78□□□□□ -0.52
PEF1YGR058W UBP10P53874 792 aaPredicted RBP11.75□□□□□ -0.53
PEF1YGR058W OXP1P28273 1286 aa11.74□□□□□ -0.53
PEF1YGR058W SCY1P53009 804 aa11.71□□□□□ -0.53
PEF1YGR058W BCH2P36122 765 aa11.68□□□□□ -0.54
PEF1YGR058W PTP3P40048 928 aa11.46□□□□□ -0.57
PEF1YGR058W SLX5P32828 619 aaKnown RBP11.45□□□□□ -0.58
PEF1YGR058W YAH1Q12184 172 aaKnown RBP11.45□□□□□ -0.58
PEF1YGR058W YIL055CP40523 627 aaKnown RBP11.42□□□□□ -0.58
PEF1YGR058W EPS1P40557 701 aa11.39□□□□□ -0.59
PEF1YGR058W BDF1P35817 686 aa11.33□□□□□ -0.6
PEF1YGR058W RSM7P47150 247 aa11.28□□□□□ -0.6
PEF1YGR058W TIF4632P39936 914 aaKnown RBP11.24□□□□□ -0.61
PEF1YGR058W TGL3P40308 642 aa11.21□□□□□ -0.61
PEF1YGR058W YLR271WQ06152 274 aa11.2□□□□□ -0.62
PEF1YGR058W AI2P03876 854 aa11.19□□□□□ -0.62
PEF1YGR058W BUD31P25337 157 aaPredicted RBP11.13□□□□□ -0.63
PEF1YGR058W BBC1P47068 1157 aa11.07□□□□□ -0.64
PEF1YGR058W SSP1P38871 571 aa11.02□□□□□ -0.65
PEF1YGR058W PSD2P53037 1138 aaKnown RBP10.96□□□□□ -0.65
PEF1YGR058W CST9Q06032 482 aa10.87□□□□□ -0.67
PEF1YGR058W MRM1P25270 412 aa10.85□□□□□ -0.67
PEF1YGR058W ARP8Q12386 881 aaKnown RBP RIP-Chip data10.82□□□□□ -0.68not detected
PEF1YGR058W MST1P07236 462 aa10.77□□□□□ -0.69
PEF1YGR058W YOR238WQ08634 303 aa10.77□□□□□ -0.69
PEF1YGR058W UBP9P39967 754 aa10.76□□□□□ -0.69
PEF1YGR058W PIB1Q06651 286 aa10.75□□□□□ -0.69
PEF1YGR058W YBL029C-AQ3E756 94 aa10.73□□□□□ -0.69
PEF1YGR058W YAP5P40574 245 aa10.71□□□□□ -0.69
PEF1YGR058W NSR1P27476 414 aaKnown RBP RIP-Chip data10.7□□□□□ -0.7not detected
PEF1YGR058W MGA2P40578 1113 aa10.68□□□□□ -0.7
PEF1YGR058W SIS1P25294 352 aaKnown RBP10.64□□□□□ -0.71
PEF1YGR058W RCR1P38212 213 aa10.64□□□□□ -0.71
PEF1YGR058W WSC3Q12215 556 aa10.63□□□□□ -0.71
PEF1YGR058W VPS29P38759 282 aa10.58□□□□□ -0.72
PEF1YGR058W YFR006WP43590 535 aa10.57□□□□□ -0.72
PEF1YGR058W VNX1P42839 908 aa10.55□□□□□ -0.72
PEF1YGR058W RTG3P38165 486 aa10.5□□□□□ -0.73
PEF1YGR058W STS1P38637 319 aa10.49□□□□□ -0.73
PEF1YGR058W GTT3P39996 337 aa10.49□□□□□ -0.73
PEF1YGR058W DBP1P24784 617 aaKnown RBP10.48□□□□□ -0.73
PEF1YGR058W YMR1P47147 688 aaKnown RBP RIP-Chip data10.44□□□□□ -0.74not detected
PEF1YGR058W SPP1Q03012 353 aa10.43□□□□□ -0.74
PEF1YGR058W TIF11P38912 153 aaKnown RBP10.34□□□□□ -0.75
PEF1YGR058W SET4P42948 560 aa10.32□□□□□ -0.76
PEF1YGR058W VMA1P17255 1071 aaKnown RBP10.31□□□□□ -0.76
PEF1YGR058W YOL036WQ08206 761 aa10.29□□□□□ -0.76
PEF1YGR058W RAM2P29703 316 aa10.27□□□□□ -0.77
PEF1YGR058W ULI1P43604 169 aa10.27□□□□□ -0.77
PEF1YGR058W IOC2Q12072 812 aa10.23□□□□□ -0.77
PEF1YGR058W LDB19Q12502 818 aa10.23□□□□□ -0.77
PEF1YGR058W FKH1P40466 484 aa10.18□□□□□ -0.78
PEF1YGR058W AIR2Q12476 344 aaKnown RBP10.18□□□□□ -0.78
PEF1YGR058W TRP5P00931 707 aaKnown RBP10.17□□□□□ -0.78
PEF1YGR058W SAM3Q08986 587 aa10.17□□□□□ -0.78
PEF1YGR058W MSB4Q12317 492 aa10.14□□□□□ -0.79
PEF1YGR058W EDS1P38073 919 aa10.12□□□□□ -0.79
PEF1YGR058W MIF2P35201 549 aa10.1□□□□□ -0.79
PEF1YGR058W MAK11P20484 414 aaKnown RBP10.08□□□□□ -0.8
PEF1YGR058W DCW1P36091 449 aa10.08□□□□□ -0.8
PEF1YGR058W GYP5Q12344 894 aa10.08□□□□□ -0.8
PEF1YGR058W RTG1P32607 177 aa10.06□□□□□ -0.8
PEF1YGR058W EAP1P36041 632 aaKnown RBP10.05□□□□□ -0.8
PEF1YGR058W COQ8P27697 501 aa10□□□□□ -0.81
PEF1YGR058W PTC3P34221 468 aaKnown RBP9.98□□□□□ -0.81
PEF1YGR058W YJL171CP46992 396 aa9.97□□□□□ -0.81
PEF1YGR058W YNL035CP53962 389 aaKnown RBP9.96□□□□□ -0.82
PEF1YGR058W HTA1P04911 132 aaKnown RBP9.93□□□□□ -0.82
PEF1YGR058W HTA2P04912 132 aa9.93□□□□□ -0.82
PEF1YGR058W GRE2Q12068 342 aaKnown RBP9.93□□□□□ -0.82
PEF1YGR058W NCR1Q12200 1170 aa9.93□□□□□ -0.82
PEF1YGR058W DAN4P47179 1161 aa9.92□□□□□ -0.82
Retrieved 100 of 5,963 RNA–protein pairs in 9.6 ms