Protein–RNA interactions for Protein: P38861

NMD3, 60S ribosomal export protein NMD3, yeastyeast

Known RBP Predictions only

Length 518 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NMD3P38861 YML009W-BYML009W-B 477 nt21.26■□□□□ 0.99
NMD3P38861 NSR1YGR159C 1245 nt21.11■□□□□ 0.97
NMD3P38861 NOP1YDL014W 984 nt20.61■□□□□ 0.89
NMD3P38861 YKL036CYKL036C 393 nt19.08■□□□□ 0.64
NMD3P38861 MDJ1YFL016C 1536 nt18.8■□□□□ 0.6
NMD3P38861 Q0297Q0297 156 nt18.11■□□□□ 0.49
NMD3P38861 SRX1YKL086W 384 nt18.07■□□□□ 0.48
NMD3P38861 YJL027CYJL027C 417 nt17.92■□□□□ 0.46
NMD3P38861 SCS3YGL126W 1143 nt17.59■□□□□ 0.41
NMD3P38861 YCR051WYCR051W 669 nt17.14■□□□□ 0.33
NMD3P38861 DBP2YNL112W 1641 nt16.69■□□□□ 0.26
NMD3P38861 YOL085CYOL085C 342 nt16.58■□□□□ 0.24
NMD3P38861 SCJ1YMR214W 1134 nt16.39■□□□□ 0.21
NMD3P38861 PKP1YIL042C 1185 nt16.36■□□□□ 0.21
NMD3P38861 TRN1tP(UGG)A 72 nt16.35■□□□□ 0.21
NMD3P38861 SUF9tP(UGG)F 72 nt16.35■□□□□ 0.21
NMD3P38861 SUF8tP(UGG)H 72 nt16.35■□□□□ 0.21
NMD3P38861 tP(UGG)LtP(UGG)L 72 nt16.35■□□□□ 0.21
NMD3P38861 SUF7tP(UGG)M 72 nt16.35■□□□□ 0.21
NMD3P38861 tP(UGG)N1tP(UGG)N1 72 nt16.35■□□□□ 0.21
NMD3P38861 tP(UGG)N2tP(UGG)N2 72 nt16.35■□□□□ 0.21
NMD3P38861 tP(UGG)O1tP(UGG)O1 72 nt16.35■□□□□ 0.21
NMD3P38861 SUF11tP(UGG)O2 72 nt16.35■□□□□ 0.21
NMD3P38861 RPP1BYDL130W 321 nt16.25■□□□□ 0.19
NMD3P38861 CCC1YLR220W 969 nt16.2■□□□□ 0.18
NMD3P38861 YBR190WYBR190W 312 nt15.96■□□□□ 0.15
NMD3P38861 ATS1YAL020C 1002 nt15.91■□□□□ 0.14
NMD3P38861 RTC3YHR087W 336 nt15.6■□□□□ 0.09
NMD3P38861 PET122YER153C 765 nt15.57■□□□□ 0.08
NMD3P38861 RVS167YDR388W 1449 nt15.51■□□□□ 0.07
NMD3P38861 tP(UGG)O3tP(UGG)O3 72 nt15.48■□□□□ 0.07
NMD3P38861 SCR1SCR1 522 nt15.29■□□□□ 0.04
NMD3P38861 RRN5YLR141W 1092 nt15.13■□□□□ 0.01
NMD3P38861 SHR5YOL110W 714 nt15.04■□□□□ -0
NMD3P38861 YDJ1YNL064C 1230 nt14.94□□□□□ -0.02
NMD3P38861 YER088W-BYER088W-B 147 nt14.83□□□□□ -0.04
NMD3P38861 RSB1YOR049C 1065 nt14.76□□□□□ -0.05
NMD3P38861 DEP1YAL013W 1218 nt14.68□□□□□ -0.06
NMD3P38861 URN1YPR152C 1398 nt14.64□□□□□ -0.07
NMD3P38861 GAR1YHR089C 618 nt14.64□□□□□ -0.07
NMD3P38861 PST2YDR032C 597 nt14.62□□□□□ -0.07
NMD3P38861 PUT4YOR348C 1884 nt14.57□□□□□ -0.08
NMD3P38861 OPI9YLR338W 858 nt14.42□□□□□ -0.1
NMD3P38861 YKL097CYKL097C 411 nt14.41□□□□□ -0.1
NMD3P38861 YNL208WYNL208W 600 nt14.38□□□□□ -0.11
NMD3P38861 SAH1YER043C 1350 nt14.36□□□□□ -0.11
NMD3P38861 RPN10YHR200W 807 nt14.32□□□□□ -0.12
NMD3P38861 ARE1YCR048W 1833 nt14.31□□□□□ -0.12
NMD3P38861 TIR1YER011W 765 nt14.14□□□□□ -0.15
NMD3P38861 POA1YBR022W 534 nt14.1□□□□□ -0.15
NMD3P38861 YHR049C-AYHR049C-A 297 nt14.07□□□□□ -0.16
NMD3P38861 SSA3YBL075C 1950 nt14.06□□□□□ -0.16
NMD3P38861 SSA1YAL005C 1929 nt14.03□□□□□ -0.16
NMD3P38861 YJR018WYJR018W 363 nt13.95□□□□□ -0.18
NMD3P38861 PUN1YLR414C 792 nt13.95□□□□□ -0.18
NMD3P38861 SRB2YHR041C 633 nt13.89□□□□□ -0.19
NMD3P38861 SHU1YHL006C 453 nt13.88□□□□□ -0.19
NMD3P38861 YJR120WYJR120W 351 nt13.86□□□□□ -0.19
NMD3P38861 PTC2YER089C 1395 nt13.84□□□□□ -0.19
NMD3P38861 BSC6YOL137W 1494 nt13.77□□□□□ -0.21
NMD3P38861 BUD23YCR047C 828 nt13.74□□□□□ -0.21
NMD3P38861 YAL037C-BYAL037C-B 975 nt13.69□□□□□ -0.22
NMD3P38861 NAB2YGL122C 1578 nt13.62□□□□□ -0.23
NMD3P38861 YOR139CYOR139C 393 nt13.62□□□□□ -0.23
NMD3P38861 RPP2BYDR382W 333 nt13.6□□□□□ -0.23
NMD3P38861 WWM1YFL010C 636 nt13.56□□□□□ -0.24
NMD3P38861 Q0182Q0182 405 nt13.54□□□□□ -0.24
NMD3P38861 NPL3YDR432W 1245 nt13.5□□□□□ -0.25
NMD3P38861 FIS1YIL065C 468 nt13.48□□□□□ -0.25
NMD3P38861 DAL1YIR027C 1383 nt13.45□□□□□ -0.26
NMD3P38861 FPR4YLR449W 1179 nt13.43□□□□□ -0.26
NMD3P38861 INM2YDR287W 879 nt13.42□□□□□ -0.26
NMD3P38861 HOM6YJR139C 1080 nt13.42□□□□□ -0.26
NMD3P38861 BDH2YAL061W 1254 nt13.4□□□□□ -0.26
NMD3P38861 MNP1YGL068W 585 nt13.38□□□□□ -0.27
NMD3P38861 YGR021WYGR021W 873 nt13.37□□□□□ -0.27
NMD3P38861 PHO4YFR034C 939 nt13.34□□□□□ -0.27
NMD3P38861 YBL100CYBL100C 315 nt13.32□□□□□ -0.28
NMD3P38861 YFL021C-AYFL021C-A 855 nt13.26□□□□□ -0.29
NMD3P38861 SPT5YML010W 3192 nt13.22□□□□□ -0.29
NMD3P38861 RKM5YLR137W 1104 nt13.21□□□□□ -0.29
NMD3P38861 LSM3YLR438C-A 270 nt13.21□□□□□ -0.29
NMD3P38861 FUN26YAL022C 1554 nt13.19□□□□□ -0.3
NMD3P38861 YOL037CYOL037C 354 nt13.14□□□□□ -0.31
NMD3P38861 TRM9YML014W 840 nt13.13□□□□□ -0.31
NMD3P38861 FPS1YLL043W 2010 nt13.12□□□□□ -0.31
NMD3P38861 YPS1YLR120C 1710 nt13.1□□□□□ -0.31
NMD3P38861 tM(CAU)CtM(CAU)C 72 nt13.07□□□□□ -0.32
NMD3P38861 IMT4tM(CAU)E 72 nt13.07□□□□□ -0.32
NMD3P38861 IMT3tM(CAU)J3 72 nt13.07□□□□□ -0.32
NMD3P38861 IMT1tM(CAU)O1 72 nt13.07□□□□□ -0.32
NMD3P38861 IMT2tM(CAU)P 72 nt13.07□□□□□ -0.32
NMD3P38861 CCT6YDR188W 1641 nt13.02□□□□□ -0.33
NMD3P38861 YDR095CYDR095C 411 nt13.01□□□□□ -0.33
NMD3P38861 ALF1YNL148C 765 nt12.92□□□□□ -0.34
NMD3P38861 MEP2YNL142W 1500 nt12.92□□□□□ -0.34
NMD3P38861 YHR165W-AYHR165W-A 312 nt12.9□□□□□ -0.34
NMD3P38861 YLR281CYLR281C 468 nt12.84□□□□□ -0.35
NMD3P38861 SUF2tP(AGG)C 72 nt12.82□□□□□ -0.36
NMD3P38861 SUF10tP(AGG)N 72 nt12.82□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms