RNA–Protein interactions for RNA: YPL004C

LSP1, Transcript of Eisosome core component, yeastyeast

Gene LSP1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
LSP1YPL004C KEL1P38853 1164 aaKnown RBP9.51□□□□□ -0.89
LSP1YPL004C YMR147WP40218 223 aaKnown RBP9.51□□□□□ -0.89
LSP1YPL004C MSH4P40965 878 aaPredicted RBP9.51□□□□□ -0.89
LSP1YPL004C HVG1P0CE11 249 aa9.5□□□□□ -0.89
LSP1YPL004C PCS60P38137 543 aaKnown RBP RIP-Chip data9.5□□□□□ -0.89not detected
LSP1YPL004C BSD2P38356 321 aa9.5□□□□□ -0.89
LSP1YPL004C TAH18Q12181 623 aa9.5□□□□□ -0.89
LSP1YPL004C LAM4P38800 1345 aa9.5□□□□□ -0.89
LSP1YPL004C PMA1P05030 918 aaKnown RBP9.49□□□□□ -0.89
LSP1YPL004C KIN1P13185 1064 aa9.49□□□□□ -0.89
LSP1YPL004C ENP2P48234 707 aaKnown RBP9.49□□□□□ -0.89
LSP1YPL004C TPS3P38426 1054 aaKnown RBP9.48□□□□□ -0.89
LSP1YPL004C PPM2Q08282 695 aa9.48□□□□□ -0.89
LSP1YPL004C KEL3Q08979 651 aaPredicted RBP9.48□□□□□ -0.89
LSP1YPL004C YBL028CP38202 106 aa9.47□□□□□ -0.89
LSP1YPL004C STM1P39015 273 aaKnown RBP9.47□□□□□ -0.89
LSP1YPL004C DUS1P53759 423 aaKnown RBP9.47□□□□□ -0.89
LSP1YPL004C YPL260WQ08977 551 aa9.47□□□□□ -0.89
LSP1YPL004C RIM20Q12033 661 aa9.47□□□□□ -0.89
LSP1YPL004C VAS1P07806 1104 aaKnown RBP9.46□□□□□ -0.9
LSP1YPL004C PFK2P16862 959 aaKnown RBP RIP-Chip data9.46□□□□□ -0.9not detected
LSP1YPL004C COQ1P18900 473 aa9.46□□□□□ -0.9
LSP1YPL004C RTS1P38903 757 aa9.46□□□□□ -0.9
LSP1YPL004C CST9Q06032 482 aa9.46□□□□□ -0.9
LSP1YPL004C MET1P36150 593 aa9.45□□□□□ -0.9
LSP1YPL004C AAP1P37898 856 aaKnown RBP9.45□□□□□ -0.9
LSP1YPL004C GIN4Q12263 1142 aa9.45□□□□□ -0.9
LSP1YPL004C TUB2P02557 457 aaKnown RBP9.44□□□□□ -0.9
LSP1YPL004C PRE8P23639 250 aa9.44□□□□□ -0.9
LSP1YPL004C SNU71P53207 620 aaKnown RBP9.44□□□□□ -0.9
LSP1YPL004C YDL124WQ07551 312 aaKnown RBP9.44□□□□□ -0.9
LSP1YPL004C TIF6Q12522 245 aaKnown RBP9.44□□□□□ -0.9
LSP1YPL004C MPH3P0CE00 602 aa9.43□□□□□ -0.9
LSP1YPL004C YHL050CP38721 697 aa9.43□□□□□ -0.9
LSP1YPL004C RBA50Q04418 439 aa9.43□□□□□ -0.9
LSP1YPL004C FPR4Q06205 392 aaPredicted RBP9.43□□□□□ -0.9
LSP1YPL004C SRM1P21827 482 aa9.42□□□□□ -0.9
LSP1YPL004C MOT2P34909 587 aaKnown RBP9.42□□□□□ -0.9
LSP1YPL004C APE3P37302 537 aaKnown RBP9.42□□□□□ -0.9
LSP1YPL004C BRN1P38170 754 aa9.42□□□□□ -0.9
LSP1YPL004C SLN1P39928 1220 aaPredicted RBP9.42□□□□□ -0.9
LSP1YPL004C GCR2Q01722 534 aa9.42□□□□□ -0.9
LSP1YPL004C SKG3Q06315 1026 aa9.42□□□□□ -0.9
LSP1YPL004C SSF2Q12153 453 aaPredicted RBP9.42□□□□□ -0.9
LSP1YPL004C SRF1Q12516 437 aa9.42□□□□□ -0.9
LSP1YPL004C RAD61Q99359 647 aa9.42□□□□□ -0.9
LSP1YPL004C CHO2P05374 869 aaKnown RBP9.41□□□□□ -0.9
LSP1YPL004C CST26P38226 397 aa9.41□□□□□ -0.9
LSP1YPL004C RSC30P38781 883 aa9.41□□□□□ -0.9
LSP1YPL004C RRP8P38961 392 aaKnown RBP9.41□□□□□ -0.9
LSP1YPL004C ACA1P39970 489 aa9.41□□□□□ -0.9
LSP1YPL004C RPS15Q01855 142 aaKnown RBP9.41□□□□□ -0.9
LSP1YPL004C MRD1Q06106 887 aaKnown RBP9.41□□□□□ -0.9
LSP1YPL004C SKI2P35207 1287 aaKnown RBP RIP-Chip data9.4□□□□□ -0.9not detected
LSP1YPL004C OCT1P35999 772 aa9.4□□□□□ -0.9
LSP1YPL004C VID27P40157 782 aa9.4□□□□□ -0.9
LSP1YPL004C SUB2Q07478 446 aaKnown RBP9.4□□□□□ -0.9
LSP1YPL004C CRG1P38892 291 aaRIP-Chip data9.39□□□□□ -0.91not detected
LSP1YPL004C NET1P47035 1189 aa9.39□□□□□ -0.91
LSP1YPL004C PEX29Q03370 554 aa9.39□□□□□ -0.91
LSP1YPL004C MYO3P36006 1272 aa9.38□□□□□ -0.91
LSP1YPL004C TIF4631P39935 952 aaKnown RBP9.38□□□□□ -0.91
LSP1YPL004C UFD2P54860 961 aa9.38□□□□□ -0.91
LSP1YPL004C SPN1Q06505 410 aaPredicted RBP9.38□□□□□ -0.91
LSP1YPL004C LAP2Q10740 671 aa9.38□□□□□ -0.91
LSP1YPL004C TUS1Q06412 1307 aa9.37□□□□□ -0.91
LSP1YPL004C ERG12P07277 443 aa9.37□□□□□ -0.91
LSP1YPL004C TPM1P17536 199 aaKnown RBP9.37□□□□□ -0.91
LSP1YPL004C SPT21P35209 758 aa9.37□□□□□ -0.91
LSP1YPL004C HXT17P53631 564 aa9.37□□□□□ -0.91
LSP1YPL004C FBP1P09201 348 aa9.36□□□□□ -0.91
LSP1YPL004C YDJ1P25491 409 aaKnown RBP9.36□□□□□ -0.91
LSP1YPL004C SPB4P25808 606 aaPredicted RBP9.36□□□□□ -0.91
LSP1YPL004C ASH1P34233 588 aa9.36□□□□□ -0.91
LSP1YPL004C PES4P39684 611 aa9.36□□□□□ -0.91
LSP1YPL004C VAB2P40003 282 aa9.36□□□□□ -0.91
LSP1YPL004C LYS14P40971 790 aa9.36□□□□□ -0.91
LSP1YPL004C JIP4Q03361 876 aa9.36□□□□□ -0.91
LSP1YPL004C CHS3P29465 1165 aa9.35□□□□□ -0.91
LSP1YPL004C PRO3P32263 286 aaKnown RBP9.35□□□□□ -0.91
LSP1YPL004C ANP1P32629 500 aa9.35□□□□□ -0.91
LSP1YPL004C DLD1P32891 587 aa9.35□□□□□ -0.91
LSP1YPL004C VPS8P39702 1274 aa9.35□□□□□ -0.91
LSP1YPL004C HXT13P39924 564 aa9.35□□□□□ -0.91
LSP1YPL004C SPR3P41901 512 aa9.35□□□□□ -0.91
LSP1YPL004C KRS1P15180 591 aaKnown RBP9.34□□□□□ -0.91
LSP1YPL004C PER1P25625 357 aa9.34□□□□□ -0.91
LSP1YPL004C RER2P35196 286 aa9.34□□□□□ -0.91
LSP1YPL004C YJL007CP47080 104 aa9.34□□□□□ -0.91
LSP1YPL004C NCS6P53088 359 aa9.34□□□□□ -0.91
LSP1YPL004C CFT2Q12102 859 aaPredicted RBP9.34□□□□□ -0.91
LSP1YPL004C RIT1P23796 513 aa9.33□□□□□ -0.92
LSP1YPL004C PEP3P27801 918 aa9.33□□□□□ -0.92
LSP1YPL004C SOL4P53315 255 aa9.33□□□□□ -0.92
LSP1YPL004C HDA1P53973 706 aa9.33□□□□□ -0.92
LSP1YPL004C IXR1P33417 597 aa9.32□□□□□ -0.92
LSP1YPL004C ERG7P38604 731 aa9.32□□□□□ -0.92
LSP1YPL004C CIC1P38779 376 aaKnown RBP9.32□□□□□ -0.92
LSP1YPL004C PTK2P47116 818 aaKnown RBP9.32□□□□□ -0.92
LSP1YPL004C DIT2P21595 489 aa9.31□□□□□ -0.92
Retrieved 100 of 5,963 RNA–protein pairs in 47 ms