RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C PDR18P53756 1333 aa15.94■□□□□ 0.14
SHU1YHL006C YDJ1P25491 409 aaKnown RBP15.93■□□□□ 0.14
SHU1YHL006C IXR1P33417 597 aa15.93■□□□□ 0.14
SHU1YHL006C OCT1P35999 772 aa15.93■□□□□ 0.14
SHU1YHL006C YMR147WP40218 223 aaKnown RBP15.93■□□□□ 0.14
SHU1YHL006C YDL124WQ07551 312 aaKnown RBP15.93■□□□□ 0.14
SHU1YHL006C KEL3Q08979 651 aaPredicted RBP15.93■□□□□ 0.14
SHU1YHL006C PAM1P37304 830 aaKnown RBP15.92■□□□□ 0.14
SHU1YHL006C ECM21P38167 1117 aaKnown RBP15.92■□□□□ 0.14
SHU1YHL006C NET1P47035 1189 aa15.91■□□□□ 0.14
SHU1YHL006C PIB2P53191 635 aa15.91■□□□□ 0.14
SHU1YHL006C ERG7P38604 731 aa15.9■□□□□ 0.14
SHU1YHL006C FBP1P09201 348 aa15.89■□□□□ 0.13
SHU1YHL006C NPL4P33755 580 aa15.88■□□□□ 0.13
SHU1YHL006C GEF1P37020 779 aa15.88■□□□□ 0.13
SHU1YHL006C IRC8P47046 822 aa15.88■□□□□ 0.13
SHU1YHL006C SNU71P53207 620 aaKnown RBP15.88■□□□□ 0.13
SHU1YHL006C KAR5Q04746 504 aa15.88■□□□□ 0.13
SHU1YHL006C MAC1P35192 417 aa15.87■□□□□ 0.13
SHU1YHL006C RMD1Q03441 430 aa15.87■□□□□ 0.13
SHU1YHL006C PBY1P38254 753 aa15.86■□□□□ 0.13
SHU1YHL006C IOC3P43596 787 aa15.86■□□□□ 0.13
SHU1YHL006C YPL260WQ08977 551 aa15.86■□□□□ 0.13
SHU1YHL006C CST26P38226 397 aa15.85■□□□□ 0.13
SHU1YHL006C CFT2Q12102 859 aaPredicted RBP15.85■□□□□ 0.13
SHU1YHL006C MPH3P0CE00 602 aa15.84■□□□□ 0.13
SHU1YHL006C MCD4P36051 919 aa15.84■□□□□ 0.13
SHU1YHL006C LYS14P40971 790 aa15.84■□□□□ 0.13
SHU1YHL006C MRPS35P53292 345 aa15.84■□□□□ 0.13
SHU1YHL006C LAP2Q10740 671 aa15.84■□□□□ 0.13
SHU1YHL006C KRS1P15180 591 aaKnown RBP15.83■□□□□ 0.12
SHU1YHL006C PRE8P23639 250 aa15.83■□□□□ 0.12
SHU1YHL006C YJL007CP47080 104 aa15.83■□□□□ 0.12
SHU1YHL006C TIF4631P39935 952 aaKnown RBP15.82■□□□□ 0.12
SHU1YHL006C VAB2P40003 282 aa15.82■□□□□ 0.12
SHU1YHL006C BBC1P47068 1157 aa15.81■□□□□ 0.12
SHU1YHL006C PKH3Q03306 898 aaPredicted RBP15.81■□□□□ 0.12
SHU1YHL006C CDC60P26637 1090 aaKnown RBP15.8■□□□□ 0.12
SHU1YHL006C YHL050CP38721 697 aa15.8■□□□□ 0.12
SHU1YHL006C SUB2Q07478 446 aaKnown RBP15.8■□□□□ 0.12
SHU1YHL006C LAM4P38800 1345 aa15.79■□□□□ 0.12
SHU1YHL006C CDC16P09798 840 aa15.79■□□□□ 0.12
SHU1YHL006C SRM1P21827 482 aa15.79■□□□□ 0.12
SHU1YHL006C RFC1P38630 861 aaKnown RBP15.79■□□□□ 0.12
SHU1YHL006C SPB4P25808 606 aaPredicted RBP15.78■□□□□ 0.12
SHU1YHL006C ATG1P53104 897 aa15.78■□□□□ 0.12
SHU1YHL006C TAH18Q12181 623 aa15.78■□□□□ 0.12
SHU1YHL006C COQ1P18900 473 aa15.77■□□□□ 0.12
SHU1YHL006C OSH3P38713 996 aaKnown RBP15.77■□□□□ 0.12
SHU1YHL006C PSF2P40359 213 aa15.77■□□□□ 0.12
SHU1YHL006C ENP2P48234 707 aaKnown RBP15.77■□□□□ 0.12
SHU1YHL006C ULP1Q02724 621 aa15.77■□□□□ 0.12
SHU1YHL006C BRE1Q07457 700 aaKnown RBP15.77■□□□□ 0.12
SHU1YHL006C ERG12P07277 443 aa15.76■□□□□ 0.11
SHU1YHL006C KTR1P27810 393 aaKnown RBP15.76■□□□□ 0.11
SHU1YHL006C RTS1P38903 757 aa15.76■□□□□ 0.11
SHU1YHL006C SKG3Q06315 1026 aa15.76■□□□□ 0.11
SHU1YHL006C UBX5Q06682 500 aa15.76■□□□□ 0.11
SHU1YHL006C TY3A-GQ12173 290 aa15.76■□□□□ 0.11
SHU1YHL006C TY3A-IQ99219 290 aa15.76■□□□□ 0.11
SHU1YHL006C VID27P40157 782 aa15.75■□□□□ 0.11
SHU1YHL006C VPS13Q07878 3144 aa15.74■□□□□ 0.11
SHU1YHL006C CHO2P05374 869 aaKnown RBP15.74■□□□□ 0.11
SHU1YHL006C SRS2P12954 1174 aa15.74■□□□□ 0.11
SHU1YHL006C PAH1P32567 862 aa15.74■□□□□ 0.11
SHU1YHL006C YML037CQ03703 340 aa15.74■□□□□ 0.11
SHU1YHL006C PER1P25625 357 aa15.73■□□□□ 0.11
SHU1YHL006C RAD61Q99359 647 aa15.73■□□□□ 0.11
SHU1YHL006C CHS3P29465 1165 aa15.72■□□□□ 0.11
SHU1YHL006C SLN1P39928 1220 aaPredicted RBP15.72■□□□□ 0.11
SHU1YHL006C MRD1Q06106 887 aaKnown RBP15.72■□□□□ 0.11
SHU1YHL006C NKP2Q06162 153 aa15.72■□□□□ 0.11
SHU1YHL006C FPR3P38911 411 aaKnown RBP15.71■□□□□ 0.11
SHU1YHL006C OPI1P21957 404 aa15.7■□□□□ 0.1
SHU1YHL006C DIT2P21595 489 aa15.69■□□□□ 0.1
SHU1YHL006C RRP8P38961 392 aaKnown RBP15.69■□□□□ 0.1
SHU1YHL006C STM1P39015 273 aaKnown RBP15.69■□□□□ 0.1
SHU1YHL006C VMA2P16140 517 aaKnown RBP15.67■□□□□ 0.1
SHU1YHL006C SAM2P19358 384 aaKnown RBP15.67■□□□□ 0.1
SHU1YHL006C PKC1P24583 1151 aa15.67■□□□□ 0.1
SHU1YHL006C PRO3P32263 286 aaKnown RBP15.67■□□□□ 0.1
SHU1YHL006C EUG1P32474 517 aa15.67■□□□□ 0.1
SHU1YHL006C MET1P36150 593 aa15.67■□□□□ 0.1
SHU1YHL006C TUS1Q06412 1307 aa15.67■□□□□ 0.1
SHU1YHL006C ACE2P21192 770 aa15.66■□□□□ 0.1
SHU1YHL006C RPS15Q01855 142 aaKnown RBP15.66■□□□□ 0.1
SHU1YHL006C VPS8P39702 1274 aa15.65■□□□□ 0.1
SHU1YHL006C VPS62P53285 467 aa15.65■□□□□ 0.1
SHU1YHL006C SOL4P53315 255 aa15.63■□□□□ 0.09
SHU1YHL006C UFD2P54860 961 aa15.63■□□□□ 0.09
SHU1YHL006C ICL2Q12031 575 aa15.63■□□□□ 0.09
SHU1YHL006C RIM20Q12033 661 aa15.63■□□□□ 0.09
SHU1YHL006C GPB2P39717 880 aa15.62■□□□□ 0.09
SHU1YHL006C MAL31P38156 614 aa15.61■□□□□ 0.09
SHU1YHL006C UBP9P39967 754 aa15.61■□□□□ 0.09
SHU1YHL006C PRY3P47033 881 aa15.61■□□□□ 0.09
SHU1YHL006C DUS4Q06063 367 aa15.61■□□□□ 0.09
SHU1YHL006C RAD18P10862 487 aa15.6■□□□□ 0.09
SHU1YHL006C PRE10P21242 288 aaKnown RBP RIP-Chip data15.6■□□□□ 0.09not detected
SHU1YHL006C MYO3P36006 1272 aa15.6■□□□□ 0.09
Retrieved 100 of 5,963 RNA–protein pairs in 10.5 ms