Protein–RNA interactions for Protein: P38630

RFC1, Replication factor C subunit 1, yeastyeast

Known RBP Predictions only

Length 861 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RFC1P38630 NSR1YGR159C 1245 nt24.52■■□□□ 1.52
RFC1P38630 YML009W-BYML009W-B 477 nt24.52■■□□□ 1.52
RFC1P38630 NOP1YDL014W 984 nt23.77■■□□□ 1.4
RFC1P38630 MDJ1YFL016C 1536 nt21.9■■□□□ 1.1
RFC1P38630 YKL036CYKL036C 393 nt21.83■■□□□ 1.09
RFC1P38630 Q0297Q0297 156 nt20.81■□□□□ 0.92
RFC1P38630 SRX1YKL086W 384 nt20.81■□□□□ 0.92
RFC1P38630 YJL027CYJL027C 417 nt20.35■□□□□ 0.85
RFC1P38630 SCS3YGL126W 1143 nt19.82■□□□□ 0.76
RFC1P38630 YCR051WYCR051W 669 nt19.71■□□□□ 0.75
RFC1P38630 DBP2YNL112W 1641 nt19.37■□□□□ 0.69
RFC1P38630 YOL085CYOL085C 342 nt18.94■□□□□ 0.62
RFC1P38630 TRN1tP(UGG)A 72 nt18.89■□□□□ 0.61
RFC1P38630 SUF9tP(UGG)F 72 nt18.89■□□□□ 0.61
RFC1P38630 SUF8tP(UGG)H 72 nt18.89■□□□□ 0.61
RFC1P38630 tP(UGG)LtP(UGG)L 72 nt18.89■□□□□ 0.61
RFC1P38630 SUF7tP(UGG)M 72 nt18.89■□□□□ 0.61
RFC1P38630 tP(UGG)N1tP(UGG)N1 72 nt18.89■□□□□ 0.61
RFC1P38630 tP(UGG)N2tP(UGG)N2 72 nt18.89■□□□□ 0.61
RFC1P38630 tP(UGG)O1tP(UGG)O1 72 nt18.89■□□□□ 0.61
RFC1P38630 SUF11tP(UGG)O2 72 nt18.89■□□□□ 0.61
RFC1P38630 CCC1YLR220W 969 nt18.71■□□□□ 0.59
RFC1P38630 YBR190WYBR190W 312 nt18.7■□□□□ 0.58
RFC1P38630 PKP1YIL042C 1185 nt18.67■□□□□ 0.58
RFC1P38630 RPP1BYDL130W 321 nt18.66■□□□□ 0.58
RFC1P38630 RTC3YHR087W 336 nt18.26■□□□□ 0.51
RFC1P38630 RVS167YDR388W 1449 nt18.08■□□□□ 0.49
RFC1P38630 SCJ1YMR214W 1134 nt18.02■□□□□ 0.48
RFC1P38630 PET122YER153C 765 nt17.85■□□□□ 0.45
RFC1P38630 tP(UGG)O3tP(UGG)O3 72 nt17.83■□□□□ 0.44
RFC1P38630 ATS1YAL020C 1002 nt17.7■□□□□ 0.42
RFC1P38630 SCR1SCR1 522 nt17.58■□□□□ 0.4
RFC1P38630 SHR5YOL110W 714 nt17.45■□□□□ 0.38
RFC1P38630 RRN5YLR141W 1092 nt17.34■□□□□ 0.37
RFC1P38630 YDJ1YNL064C 1230 nt17.24■□□□□ 0.35
RFC1P38630 PUT4YOR348C 1884 nt17.12■□□□□ 0.33
RFC1P38630 URN1YPR152C 1398 nt17.06■□□□□ 0.32
RFC1P38630 DEP1YAL013W 1218 nt17.03■□□□□ 0.32
RFC1P38630 YER088W-BYER088W-B 147 nt17■□□□□ 0.31
RFC1P38630 RSB1YOR049C 1065 nt16.9■□□□□ 0.3
RFC1P38630 GAR1YHR089C 618 nt16.88■□□□□ 0.29
RFC1P38630 OPI9YLR338W 858 nt16.85■□□□□ 0.29
RFC1P38630 SAH1YER043C 1350 nt16.79■□□□□ 0.28
RFC1P38630 ARE1YCR048W 1833 nt16.78■□□□□ 0.28
RFC1P38630 RPN10YHR200W 807 nt16.72■□□□□ 0.27
RFC1P38630 YNL208WYNL208W 600 nt16.72■□□□□ 0.27
RFC1P38630 POA1YBR022W 534 nt16.57■□□□□ 0.24
RFC1P38630 YHR049C-AYHR049C-A 297 nt16.51■□□□□ 0.23
RFC1P38630 PST2YDR032C 597 nt16.44■□□□□ 0.22
RFC1P38630 TIR1YER011W 765 nt16.32■□□□□ 0.2
RFC1P38630 PUN1YLR414C 792 nt16.32■□□□□ 0.2
RFC1P38630 SSA3YBL075C 1950 nt16.28■□□□□ 0.2
RFC1P38630 YJR018WYJR018W 363 nt16.27■□□□□ 0.2
RFC1P38630 BSC6YOL137W 1494 nt16.22■□□□□ 0.19
RFC1P38630 SSA1YAL005C 1929 nt16.19■□□□□ 0.18
RFC1P38630 PTC2YER089C 1395 nt16.18■□□□□ 0.18
RFC1P38630 BUD23YCR047C 828 nt16.12■□□□□ 0.17
RFC1P38630 YJR120WYJR120W 351 nt16.04■□□□□ 0.16
RFC1P38630 NAB2YGL122C 1578 nt15.98■□□□□ 0.15
RFC1P38630 SRB2YHR041C 633 nt15.94■□□□□ 0.14
RFC1P38630 RPP2BYDR382W 333 nt15.86■□□□□ 0.13
RFC1P38630 SHU1YHL006C 453 nt15.79■□□□□ 0.12
RFC1P38630 FIS1YIL065C 468 nt15.75■□□□□ 0.11
RFC1P38630 DAL1YIR027C 1383 nt15.75■□□□□ 0.11
RFC1P38630 INM2YDR287W 879 nt15.7■□□□□ 0.1
RFC1P38630 FPR4YLR449W 1179 nt15.68■□□□□ 0.1
RFC1P38630 SPT5YML010W 3192 nt15.65■□□□□ 0.1
RFC1P38630 YKL097CYKL097C 411 nt15.65■□□□□ 0.1
RFC1P38630 WWM1YFL010C 636 nt15.61■□□□□ 0.09
RFC1P38630 YAL037C-BYAL037C-B 975 nt15.61■□□□□ 0.09
RFC1P38630 PHO4YFR034C 939 nt15.59■□□□□ 0.09
RFC1P38630 BDH2YAL061W 1254 nt15.56■□□□□ 0.08
RFC1P38630 YBL100CYBL100C 315 nt15.52■□□□□ 0.08
RFC1P38630 YGR021WYGR021W 873 nt15.41■□□□□ 0.06
RFC1P38630 HOM6YJR139C 1080 nt15.41■□□□□ 0.06
RFC1P38630 YPS1YLR120C 1710 nt15.37■□□□□ 0.05
RFC1P38630 FUN26YAL022C 1554 nt15.35■□□□□ 0.05
RFC1P38630 LSM3YLR438C-A 270 nt15.34■□□□□ 0.05
RFC1P38630 YFL021C-AYFL021C-A 855 nt15.32■□□□□ 0.04
RFC1P38630 MNP1YGL068W 585 nt15.3■□□□□ 0.04
RFC1P38630 TRM9YML014W 840 nt15.29■□□□□ 0.04
RFC1P38630 MEP2YNL142W 1500 nt15.23■□□□□ 0.03
RFC1P38630 YDR095CYDR095C 411 nt15.23■□□□□ 0.03
RFC1P38630 RKM5YLR137W 1104 nt15.17■□□□□ 0.02
RFC1P38630 YHR165W-AYHR165W-A 312 nt15.16■□□□□ 0.02
RFC1P38630 CCT6YDR188W 1641 nt15.15■□□□□ 0.02
RFC1P38630 YOR139CYOR139C 393 nt15.12■□□□□ 0.01
RFC1P38630 ALF1YNL148C 765 nt15.11■□□□□ 0.01
RFC1P38630 SSA4YER103W 1929 nt15.05■□□□□ 0
RFC1P38630 DCW1YKL046C 1350 nt15.02■□□□□ -0
RFC1P38630 SUF2tP(AGG)C 72 nt14.98□□□□□ -0.01
RFC1P38630 SUF10tP(AGG)N 72 nt14.98□□□□□ -0.01
RFC1P38630 YOL037CYOL037C 354 nt14.96□□□□□ -0.01
RFC1P38630 PTP1YDL230W 1008 nt14.95□□□□□ -0.02
RFC1P38630 NPL3YDR432W 1245 nt14.95□□□□□ -0.02
RFC1P38630 SIS1YNL007C 1059 nt14.95□□□□□ -0.02
RFC1P38630 RPP2AYOL039W 321 nt14.94□□□□□ -0.02
RFC1P38630 CAC2YML102W 1407 nt14.84□□□□□ -0.03
RFC1P38630 EMI2YDR516C 1503 nt14.81□□□□□ -0.04
RFC1P38630 ART5YGR068C 1761 nt14.74□□□□□ -0.05
Retrieved 100 of 7,029 protein–RNA pairs in 13 ms