Protein–RNA interactions for Protein: P53285

VPS62, Vacuolar protein sorting-associated protein 62, yeastyeast

Predictions only

Length 467 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
VPS62P53285 YML009W-BYML009W-B 477 nt22.85■■□□□ 1.25
VPS62P53285 NOP1YDL014W 984 nt22.5■■□□□ 1.19
VPS62P53285 NSR1YGR159C 1245 nt22.09■■□□□ 1.13
VPS62P53285 YKL036CYKL036C 393 nt21.41■■□□□ 1.02
VPS62P53285 YJL027CYJL027C 417 nt20.12■□□□□ 0.81
VPS62P53285 Q0297Q0297 156 nt19.92■□□□□ 0.78
VPS62P53285 SCS3YGL126W 1143 nt19.84■□□□□ 0.77
VPS62P53285 SRX1YKL086W 384 nt19.66■□□□□ 0.74
VPS62P53285 MDJ1YFL016C 1536 nt18.95■□□□□ 0.62
VPS62P53285 YCR051WYCR051W 669 nt18.7■□□□□ 0.58
VPS62P53285 YOL085CYOL085C 342 nt18.51■□□□□ 0.55
VPS62P53285 SCJ1YMR214W 1134 nt18.48■□□□□ 0.55
VPS62P53285 PKP1YIL042C 1185 nt18.14■□□□□ 0.49
VPS62P53285 ATS1YAL020C 1002 nt17.93■□□□□ 0.46
VPS62P53285 RPP1BYDL130W 321 nt17.87■□□□□ 0.45
VPS62P53285 TRN1tP(UGG)A 72 nt17.36■□□□□ 0.37
VPS62P53285 SUF9tP(UGG)F 72 nt17.36■□□□□ 0.37
VPS62P53285 SUF8tP(UGG)H 72 nt17.36■□□□□ 0.37
VPS62P53285 tP(UGG)LtP(UGG)L 72 nt17.36■□□□□ 0.37
VPS62P53285 SUF7tP(UGG)M 72 nt17.36■□□□□ 0.37
VPS62P53285 tP(UGG)N1tP(UGG)N1 72 nt17.36■□□□□ 0.37
VPS62P53285 tP(UGG)N2tP(UGG)N2 72 nt17.36■□□□□ 0.37
VPS62P53285 tP(UGG)O1tP(UGG)O1 72 nt17.36■□□□□ 0.37
VPS62P53285 SUF11tP(UGG)O2 72 nt17.36■□□□□ 0.37
VPS62P53285 CCC1YLR220W 969 nt17.18■□□□□ 0.34
VPS62P53285 DBP2YNL112W 1641 nt17.03■□□□□ 0.32
VPS62P53285 SCR1SCR1 522 nt17.02■□□□□ 0.32
VPS62P53285 PET122YER153C 765 nt16.99■□□□□ 0.31
VPS62P53285 RTC3YHR087W 336 nt16.77■□□□□ 0.28
VPS62P53285 tP(UGG)O3tP(UGG)O3 72 nt16.65■□□□□ 0.26
VPS62P53285 RRN5YLR141W 1092 nt16.56■□□□□ 0.24
VPS62P53285 PST2YDR032C 597 nt16.48■□□□□ 0.23
VPS62P53285 RSB1YOR049C 1065 nt16.45■□□□□ 0.22
VPS62P53285 YER088W-BYER088W-B 147 nt16.25■□□□□ 0.19
VPS62P53285 RVS167YDR388W 1449 nt16.23■□□□□ 0.19
VPS62P53285 YKL097CYKL097C 411 nt16.23■□□□□ 0.19
VPS62P53285 YDJ1YNL064C 1230 nt16.11■□□□□ 0.17
VPS62P53285 YBR190WYBR190W 312 nt15.97■□□□□ 0.15
VPS62P53285 SHR5YOL110W 714 nt15.81■□□□□ 0.12
VPS62P53285 SHU1YHL006C 453 nt15.65■□□□□ 0.1
VPS62P53285 GAR1YHR089C 618 nt15.63■□□□□ 0.09
VPS62P53285 YOR139CYOR139C 393 nt15.42■□□□□ 0.06
VPS62P53285 NPL3YDR432W 1245 nt15.17■□□□□ 0.02
VPS62P53285 YAL037C-BYAL037C-B 975 nt15.17■□□□□ 0.02
VPS62P53285 DEP1YAL013W 1218 nt15.1■□□□□ 0.01
VPS62P53285 TIR1YER011W 765 nt15.07■□□□□ 0
VPS62P53285 YNL208WYNL208W 600 nt14.97□□□□□ -0.01
VPS62P53285 URN1YPR152C 1398 nt14.93□□□□□ -0.02
VPS62P53285 RPN10YHR200W 807 nt14.9□□□□□ -0.02
VPS62P53285 tM(CAU)CtM(CAU)C 72 nt14.77□□□□□ -0.05
VPS62P53285 IMT4tM(CAU)E 72 nt14.77□□□□□ -0.05
VPS62P53285 IMT3tM(CAU)J3 72 nt14.77□□□□□ -0.05
VPS62P53285 IMT1tM(CAU)O1 72 nt14.77□□□□□ -0.05
VPS62P53285 IMT2tM(CAU)P 72 nt14.77□□□□□ -0.05
VPS62P53285 YOL037CYOL037C 354 nt14.75□□□□□ -0.05
VPS62P53285 SSA1YAL005C 1929 nt14.74□□□□□ -0.05
VPS62P53285 MNP1YGL068W 585 nt14.69□□□□□ -0.06
VPS62P53285 YGR021WYGR021W 873 nt14.69□□□□□ -0.06
VPS62P53285 HOM6YJR139C 1080 nt14.66□□□□□ -0.06
VPS62P53285 SRB2YHR041C 633 nt14.61□□□□□ -0.07
VPS62P53285 OPI9YLR338W 858 nt14.56□□□□□ -0.08
VPS62P53285 WWM1YFL010C 636 nt14.52□□□□□ -0.09
VPS62P53285 BSC6YOL137W 1494 nt14.51□□□□□ -0.09
VPS62P53285 MOT3YMR070W 1473 nt14.5□□□□□ -0.09
VPS62P53285 RKM5YLR137W 1104 nt14.44□□□□□ -0.1
VPS62P53285 PUS2YGL063W 1113 nt14.41□□□□□ -0.1
VPS62P53285 YLR281CYLR281C 468 nt14.32□□□□□ -0.12
VPS62P53285 YFL021C-AYFL021C-A 855 nt14.3□□□□□ -0.12
VPS62P53285 SAH1YER043C 1350 nt14.28□□□□□ -0.12
VPS62P53285 YJR018WYJR018W 363 nt14.28□□□□□ -0.12
VPS62P53285 RPP2BYDR382W 333 nt14.21□□□□□ -0.13
VPS62P53285 MRPL8YJL063C 717 nt14.19□□□□□ -0.14
VPS62P53285 YJR120WYJR120W 351 nt14.19□□□□□ -0.14
VPS62P53285 WHI5YOR083W 888 nt14.17□□□□□ -0.14
VPS62P53285 PUN1YLR414C 792 nt14.16□□□□□ -0.14
VPS62P53285 SSA3YBL075C 1950 nt14.08□□□□□ -0.16
VPS62P53285 FMP45YDL222C 930 nt14.05□□□□□ -0.16
VPS62P53285 BDH2YAL061W 1254 nt14.03□□□□□ -0.16
VPS62P53285 LSM3YLR438C-A 270 nt13.97□□□□□ -0.17
VPS62P53285 YCH1YGR203W 447 nt13.96□□□□□ -0.17
VPS62P53285 DSK2YMR276W 1122 nt13.96□□□□□ -0.17
VPS62P53285 PUT4YOR348C 1884 nt13.95□□□□□ -0.18
VPS62P53285 ADO1YJR105W 1023 nt13.94□□□□□ -0.18
VPS62P53285 UBX6YJL048C 1191 nt13.93□□□□□ -0.18
VPS62P53285 YPR011CYPR011C 981 nt13.93□□□□□ -0.18
VPS62P53285 ARE1YCR048W 1833 nt13.92□□□□□ -0.18
VPS62P53285 IMP2'YIL154C 1041 nt13.89□□□□□ -0.19
VPS62P53285 YLR236CYLR236C 324 nt13.88□□□□□ -0.19
VPS62P53285 PTC2YER089C 1395 nt13.84□□□□□ -0.19
VPS62P53285 YEL076C-AYEL076C-A 651 nt13.81□□□□□ -0.2
VPS62P53285 YEL076CYEL076C 651 nt13.81□□□□□ -0.2
VPS62P53285 YLR464WYLR464W 651 nt13.81□□□□□ -0.2
VPS62P53285 YHR049C-AYHR049C-A 297 nt13.75□□□□□ -0.21
VPS62P53285 INM2YDR287W 879 nt13.69□□□□□ -0.22
VPS62P53285 YLR154C-GYLR154C-G 150 nt13.68□□□□□ -0.22
VPS62P53285 YBL100CYBL100C 315 nt13.67□□□□□ -0.22
VPS62P53285 RTG1YOL067C 534 nt13.65□□□□□ -0.22
VPS62P53285 TRM9YML014W 840 nt13.64□□□□□ -0.23
VPS62P53285 SIS1YNL007C 1059 nt13.62□□□□□ -0.23
VPS62P53285 SPP1YPL138C 1062 nt13.61□□□□□ -0.23
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms