RNA–Protein interactions for RNA: YCL074W

YCL074W, Transcript of Pseudogene: encodes fragment of Ty Pol protein, yeast

Gene YCL074W, Length 927 nt, Biotype pseudogene.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
YCL074W	YCL074W	HSP82	P02829	709 aa	Known RBP	11.74	□□□□□ -0.53
YCL074W	YCL074W	CBP3	P21560	335 aa		11.74	□□□□□ -0.53
YCL074W	YCL074W	NPR2	P39923	615 aa		11.74	□□□□□ -0.53
YCL074W	YCL074W	TPM2	P40414	161 aa		11.74	□□□□□ -0.53
YCL074W	YCL074W	UTP22	P53254	1237 aa	Predicted RBP	11.73	□□□□□ -0.53
YCL074W	YCL074W	FAR11	P53917	953 aa		11.73	□□□□□ -0.53
YCL074W	YCL074W	VMS1	Q04311	632 aa	Known RBP	11.73	□□□□□ -0.53
YCL074W	YCL074W	ICP55	P40051	511 aa		11.72	□□□□□ -0.53
YCL074W	YCL074W	TFG2	P41896	400 aa	Predicted RBP	11.72	□□□□□ -0.53
YCL074W	YCL074W	SYF1	Q04048	859 aa	Predicted RBP	11.72	□□□□□ -0.53
YCL074W	YCL074W	INM2	Q05533	292 aa		11.72	□□□□□ -0.53
YCL074W	YCL074W	CTI6	Q08923	506 aa		11.72	□□□□□ -0.53
YCL074W	YCL074W	HXK1	P04806	485 aa	Known RBP	11.71	□□□□□ -0.53
YCL074W	YCL074W	SSA2	P10592	639 aa	Known RBP	11.71	□□□□□ -0.53
YCL074W	YCL074W	COQ1	P18900	473 aa		11.71	□□□□□ -0.53
YCL074W	YCL074W	GRX7	P38068	203 aa		11.71	□□□□□ -0.53
YCL074W	YCL074W	RPN10	P38886	268 aa	Known RBP	11.71	□□□□□ -0.53
YCL074W	YCL074W	YIR042C	P40586	236 aa		11.71	□□□□□ -0.53
YCL074W	YCL074W	ISW2	Q08773	1120 aa		11.71	□□□□□ -0.53
YCL074W	YCL074W	RGP1	P16664	663 aa		11.7	□□□□□ -0.54
YCL074W	YCL074W	HCA4	P20448	770 aa	Known RBP	11.7	□□□□□ -0.54
YCL074W	YCL074W	UBP1	P25037	809 aa		11.7	□□□□□ -0.54
YCL074W	YCL074W	GSY2	P27472	705 aa		11.7	□□□□□ -0.54
YCL074W	YCL074W	BMH2	P34730	273 aa	Known RBP	11.7	□□□□□ -0.54
YCL074W	YCL074W	AKR1	P39010	764 aa		11.7	□□□□□ -0.54
YCL074W	YCL074W	UFD2	P54860	961 aa		11.7	□□□□□ -0.54
YCL074W	YCL074W	BDF2	Q07442	638 aa		11.7	□□□□□ -0.54
YCL074W	YCL074W	RPL22A	P05749	121 aa	Known RBP	11.69	□□□□□ -0.54
YCL074W	YCL074W	MFT1	P33441	392 aa	Known RBP	11.69	□□□□□ -0.54
YCL074W	YCL074W	BDF1	P35817	686 aa		11.69	□□□□□ -0.54
YCL074W	YCL074W	NOC2	P39744	710 aa	Known RBP	11.69	□□□□□ -0.54
YCL074W	YCL074W	HOS3	Q02959	697 aa	Known RBP	11.69	□□□□□ -0.54
YCL074W	YCL074W	LEO1	P38439	464 aa		11.68	□□□□□ -0.54
YCL074W	YCL074W	RPS15	Q01855	142 aa	Known RBP	11.68	□□□□□ -0.54
YCL074W	YCL074W	SRP40	P32583	406 aa	Predicted RBP	11.67	□□□□□ -0.54
YCL074W	YCL074W	BOI1	P38041	980 aa	Known RBP	11.67	□□□□□ -0.54
YCL074W	YCL074W	FYV10	P40492	516 aa		11.67	□□□□□ -0.54
YCL074W	YCL074W	FIG2	P25653	1609 aa		11.67	□□□□□ -0.54
YCL074W	YCL074W	SWI4	P25302	1093 aa	Known RBP	11.66	□□□□□ -0.54
YCL074W	YCL074W	ASF1	P32447	279 aa		11.66	□□□□□ -0.54
YCL074W	YCL074W	MNR2	P35724	969 aa		11.66	□□□□□ -0.54
YCL074W	YCL074W	WAR1	Q03631	944 aa		11.66	□□□□□ -0.54
YCL074W	YCL074W	YMR074C	Q04773	145 aa		11.66	□□□□□ -0.54
YCL074W	YCL074W	TFC6	Q06339	672 aa		11.66	□□□□□ -0.54
YCL074W	YCL074W	DCS2	Q12123	353 aa		11.66	□□□□□ -0.54
YCL074W	YCL074W	CHO2	P05374	869 aa	Known RBP	11.65	□□□□□ -0.54
YCL074W	YCL074W	MCM4	P30665	933 aa	Known RBP	11.65	□□□□□ -0.54
YCL074W	YCL074W	SPC110	P32380	944 aa		11.65	□□□□□ -0.54
YCL074W	YCL074W	RPN1	P38764	993 aa	Known RBP	11.65	□□□□□ -0.54
YCL074W	YCL074W	GET3	Q12154	354 aa	Known RBP	11.65	□□□□□ -0.54
YCL074W	YCL074W	SPL2	P38839	148 aa		11.64	□□□□□ -0.55
YCL074W	YCL074W	RPT4	P53549	437 aa	Known RBP	11.64	□□□□□ -0.55
YCL074W	YCL074W	MRD1	Q06106	887 aa	Known RBP	11.64	□□□□□ -0.55
YCL074W	YCL074W	PSF3	Q12146	194 aa		11.64	□□□□□ -0.55
YCL074W	YCL074W	FRD1	P32614	470 aa	Known RBP	11.63	□□□□□ -0.55
YCL074W	YCL074W	ANP1	P32629	500 aa		11.63	□□□□□ -0.55
YCL074W	YCL074W	PTK1	P36002	662 aa	Predicted RBP	11.63	□□□□□ -0.55
YCL074W	YCL074W	MAL31	P38156	614 aa		11.63	□□□□□ -0.55
YCL074W	YCL074W	RPG1	P38249	964 aa	Known RBP	11.63	□□□□□ -0.55
YCL074W	YCL074W	TCD1	P38756	429 aa		11.63	□□□□□ -0.55
YCL074W	YCL074W	RTS1	P38903	757 aa		11.63	□□□□□ -0.55
YCL074W	YCL074W	ALG2	P43636	503 aa		11.63	□□□□□ -0.55
YCL074W	YCL074W	CUE3	P53137	624 aa	Known RBP	11.63	□□□□□ -0.55
YCL074W	YCL074W	GDE1	Q02979	1223 aa		11.63	□□□□□ -0.55
YCL074W	YCL074W	IRC4	Q03036	179 aa		11.63	□□□□□ -0.55
YCL074W	YCL074W	SAS4	Q04003	481 aa		11.63	□□□□□ -0.55
YCL074W	YCL074W	IRC3	Q06683	689 aa		11.63	□□□□□ -0.55
YCL074W	YCL074W	ARP8	Q12386	881 aa	Known RBP RIP-Chip data	11.63	□□□□□ -0.55	not detected
YCL074W	YCL074W	CDC6	P09119	513 aa		11.62	□□□□□ -0.55
YCL074W	YCL074W	MSH4	P40965	878 aa	Predicted RBP	11.62	□□□□□ -0.55
YCL074W	YCL074W	HPC2	Q01448	625 aa		11.62	□□□□□ -0.55
YCL074W	YCL074W	CSC1	Q06538	782 aa		11.62	□□□□□ -0.55
YCL074W	YCL074W	RIX7	Q07844	837 aa	Known RBP	11.62	□□□□□ -0.55
YCL074W	YCL074W	NBL1	Q3E7Y6	73 aa		11.62	□□□□□ -0.55
YCL074W	YCL074W	KRE2	P27809	442 aa		11.61	□□□□□ -0.55
YCL074W	YCL074W	URA1	P28272	314 aa	Predicted RBP	11.61	□□□□□ -0.55
YCL074W	YCL074W	MYO3	P36006	1272 aa		11.61	□□□□□ -0.55
YCL074W	YCL074W	CEP3	P40969	608 aa		11.61	□□□□□ -0.55
YCL074W	YCL074W	YFH7	P43591	353 aa		11.61	□□□□□ -0.55
YCL074W	YCL074W	CTH1	P47976	325 aa		11.61	□□□□□ -0.55
YCL074W	YCL074W	HDA1	P53973	706 aa		11.61	□□□□□ -0.55
YCL074W	YCL074W	UBX2	Q04228	584 aa		11.61	□□□□□ -0.55
YCL074W	YCL074W	HCR1	Q05775	265 aa	Known RBP	11.61	□□□□□ -0.55
YCL074W	YCL074W	SFI1	Q12369	946 aa		11.61	□□□□□ -0.55
YCL074W	YCL074W	LCB1	P25045	558 aa	Known RBP	11.6	□□□□□ -0.55
YCL074W	YCL074W	SAC6	P32599	642 aa	Known RBP	11.6	□□□□□ -0.55
YCL074W	YCL074W	RPT3	P33298	428 aa	Known RBP	11.6	□□□□□ -0.55
YCL074W	YCL074W	MDL2	P33311	773 aa		11.6	□□□□□ -0.55
YCL074W	YCL074W	RXT2	P38255	430 aa		11.6	□□□□□ -0.55
YCL074W	YCL074W	PTK2	P47116	818 aa	Known RBP	11.6	□□□□□ -0.55
YCL074W	YCL074W	JSN1	P47135	1091 aa	Known RBP RIP-Chip data	11.6	□□□□□ -0.55	not detected
YCL074W	YCL074W	LYS4	P49367	693 aa	Predicted RBP	11.6	□□□□□ -0.55
YCL074W	YCL074W	TFC8	Q12308	588 aa		11.6	□□□□□ -0.55
YCL074W	YCL074W	CEX1	Q12453	761 aa		11.6	□□□□□ -0.55
YCL074W	YCL074W	MAK31	P23059	88 aa		11.59	□□□□□ -0.55
YCL074W	YCL074W	MCM3	P24279	971 aa	Known RBP	11.59	□□□□□ -0.55
YCL074W	YCL074W	BMH1	P29311	267 aa	Known RBP	11.59	□□□□□ -0.55
YCL074W	YCL074W	TOS1	P38288	455 aa		11.59	□□□□□ -0.55
YCL074W	YCL074W	PIP2	P52960	996 aa		11.59	□□□□□ -0.55
YCL074W	YCL074W	VPS75	P53853	264 aa		11.59	□□□□□ -0.55

Retrieved 100 of 5,963 RNA–protein pairs in 43.7 ms