Protein–RNA interactions for Protein: P40969

CEP3, Centromere DNA-binding protein complex CBF3 subunit B, yeastyeast

Predictions only

Length 608 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CEP3P40969 NSR1YGR159C 1245 nt21.46■■□□□ 1.03
CEP3P40969 YML009W-BYML009W-B 477 nt21■□□□□ 0.95
CEP3P40969 NOP1YDL014W 984 nt20.09■□□□□ 0.81
CEP3P40969 MDJ1YFL016C 1536 nt19.78■□□□□ 0.76
CEP3P40969 YJL027CYJL027C 417 nt18.16■□□□□ 0.5
CEP3P40969 YKL036CYKL036C 393 nt17.89■□□□□ 0.45
CEP3P40969 SRX1YKL086W 384 nt17.56■□□□□ 0.4
CEP3P40969 Q0297Q0297 156 nt17.35■□□□□ 0.37
CEP3P40969 DBP2YNL112W 1641 nt17.18■□□□□ 0.34
CEP3P40969 YBR190WYBR190W 312 nt17.01■□□□□ 0.31
CEP3P40969 SSA3YBL075C 1950 nt16.69■□□□□ 0.26
CEP3P40969 YCR051WYCR051W 669 nt16.65■□□□□ 0.26
CEP3P40969 RTC3YHR087W 336 nt16.64■□□□□ 0.25
CEP3P40969 TRN1tP(UGG)A 72 nt16.29■□□□□ 0.2
CEP3P40969 SUF9tP(UGG)F 72 nt16.29■□□□□ 0.2
CEP3P40969 SUF8tP(UGG)H 72 nt16.29■□□□□ 0.2
CEP3P40969 tP(UGG)LtP(UGG)L 72 nt16.29■□□□□ 0.2
CEP3P40969 SUF7tP(UGG)M 72 nt16.29■□□□□ 0.2
CEP3P40969 tP(UGG)N1tP(UGG)N1 72 nt16.29■□□□□ 0.2
CEP3P40969 tP(UGG)N2tP(UGG)N2 72 nt16.29■□□□□ 0.2
CEP3P40969 tP(UGG)O1tP(UGG)O1 72 nt16.29■□□□□ 0.2
CEP3P40969 SUF11tP(UGG)O2 72 nt16.29■□□□□ 0.2
CEP3P40969 CCC1YLR220W 969 nt16.2■□□□□ 0.18
CEP3P40969 PUT4YOR348C 1884 nt16■□□□□ 0.15
CEP3P40969 RVS167YDR388W 1449 nt15.97■□□□□ 0.15
CEP3P40969 SCS3YGL126W 1143 nt15.91■□□□□ 0.14
CEP3P40969 SCJ1YMR214W 1134 nt15.77■□□□□ 0.12
CEP3P40969 RPP1BYDL130W 321 nt15.58■□□□□ 0.08
CEP3P40969 YOL085CYOL085C 342 nt15.53■□□□□ 0.08
CEP3P40969 ARE1YCR048W 1833 nt15.5■□□□□ 0.07
CEP3P40969 POA1YBR022W 534 nt15.49■□□□□ 0.07
CEP3P40969 PKP1YIL042C 1185 nt15.43■□□□□ 0.06
CEP3P40969 YHR049C-AYHR049C-A 297 nt15.32■□□□□ 0.04
CEP3P40969 SAH1YER043C 1350 nt15.32■□□□□ 0.04
CEP3P40969 URN1YPR152C 1398 nt15.3■□□□□ 0.04
CEP3P40969 BSC6YOL137W 1494 nt15.27■□□□□ 0.03
CEP3P40969 SHR5YOL110W 714 nt15.25■□□□□ 0.03
CEP3P40969 tP(UGG)O3tP(UGG)O3 72 nt15.2■□□□□ 0.02
CEP3P40969 OPI9YLR338W 858 nt15.2■□□□□ 0.02
CEP3P40969 DEP1YAL013W 1218 nt15.14■□□□□ 0.01
CEP3P40969 SPT5YML010W 3192 nt15.03■□□□□ -0
CEP3P40969 PET122YER153C 765 nt15□□□□□ -0.01
CEP3P40969 BUD23YCR047C 828 nt14.94□□□□□ -0.02
CEP3P40969 SSA4YER103W 1929 nt14.88□□□□□ -0.03
CEP3P40969 RPN10YHR200W 807 nt14.86□□□□□ -0.03
CEP3P40969 YNL208WYNL208W 600 nt14.75□□□□□ -0.05
CEP3P40969 PUN1YLR414C 792 nt14.74□□□□□ -0.05
CEP3P40969 PTC2YER089C 1395 nt14.73□□□□□ -0.05
CEP3P40969 YDJ1YNL064C 1230 nt14.69□□□□□ -0.06
CEP3P40969 SCR1SCR1 522 nt14.61□□□□□ -0.07
CEP3P40969 NAB2YGL122C 1578 nt14.6□□□□□ -0.07
CEP3P40969 YJR018WYJR018W 363 nt14.55□□□□□ -0.08
CEP3P40969 GAR1YHR089C 618 nt14.53□□□□□ -0.08
CEP3P40969 RRN5YLR141W 1092 nt14.5□□□□□ -0.09
CEP3P40969 MEP2YNL142W 1500 nt14.39□□□□□ -0.11
CEP3P40969 BDF1YLR399C 2061 nt14.36□□□□□ -0.11
CEP3P40969 FIS1YIL065C 468 nt14.31□□□□□ -0.12
CEP3P40969 FPR4YLR449W 1179 nt14.29□□□□□ -0.12
CEP3P40969 DAL1YIR027C 1383 nt14.27□□□□□ -0.12
CEP3P40969 YER088W-BYER088W-B 147 nt14.2□□□□□ -0.14
CEP3P40969 DCW1YKL046C 1350 nt14.18□□□□□ -0.14
CEP3P40969 YJR120WYJR120W 351 nt14.17□□□□□ -0.14
CEP3P40969 TAT1YBR069C 1860 nt14.14□□□□□ -0.15
CEP3P40969 PHO4YFR034C 939 nt14.14□□□□□ -0.15
CEP3P40969 YPS1YLR120C 1710 nt14.11□□□□□ -0.15
CEP3P40969 INM2YDR287W 879 nt14.1□□□□□ -0.15
CEP3P40969 TIR1YER011W 765 nt14.05□□□□□ -0.16
CEP3P40969 SSA1YAL005C 1929 nt14.04□□□□□ -0.16
CEP3P40969 RPP2BYDR382W 333 nt14.04□□□□□ -0.16
CEP3P40969 YHR165W-AYHR165W-A 312 nt14.04□□□□□ -0.16
CEP3P40969 ATS1YAL020C 1002 nt14.03□□□□□ -0.16
CEP3P40969 RSB1YOR049C 1065 nt13.99□□□□□ -0.17
CEP3P40969 EMI2YDR516C 1503 nt13.95□□□□□ -0.18
CEP3P40969 YBR220CYBR220C 1683 nt13.92□□□□□ -0.18
CEP3P40969 YDR095CYDR095C 411 nt13.91□□□□□ -0.18
CEP3P40969 YMR090WYMR090W 684 nt13.9□□□□□ -0.18
CEP3P40969 YBL100CYBL100C 315 nt13.86□□□□□ -0.19
CEP3P40969 PAC11YDR488C 1602 nt13.79□□□□□ -0.2
CEP3P40969 YDL221WYDL221W 552 nt13.77□□□□□ -0.21
CEP3P40969 CAC2YML102W 1407 nt13.75□□□□□ -0.21
CEP3P40969 SDH1YKL148C 1923 nt13.74□□□□□ -0.21
CEP3P40969 PTP1YDL230W 1008 nt13.7□□□□□ -0.22
CEP3P40969 SRB2YHR041C 633 nt13.7□□□□□ -0.22
CEP3P40969 FUN26YAL022C 1554 nt13.68□□□□□ -0.22
CEP3P40969 RPP2AYOL039W 321 nt13.66□□□□□ -0.22
CEP3P40969 BDH2YAL061W 1254 nt13.64□□□□□ -0.23
CEP3P40969 ALF1YNL148C 765 nt13.64□□□□□ -0.23
CEP3P40969 PCH2YBR186W 1695 nt13.56□□□□□ -0.24
CEP3P40969 SCC4YER147C 1875 nt13.56□□□□□ -0.24
CEP3P40969 TRM9YML014W 840 nt13.53□□□□□ -0.24
CEP3P40969 IRC15YPL017C 1500 nt13.52□□□□□ -0.25
CEP3P40969 GUT2YIL155C 1950 nt13.52□□□□□ -0.25
CEP3P40969 SEC11YIR022W 504 nt13.49□□□□□ -0.25
CEP3P40969 GIS3YLR094C 1509 nt13.45□□□□□ -0.26
CEP3P40969 SIS1YNL007C 1059 nt13.43□□□□□ -0.26
CEP3P40969 CCT6YDR188W 1641 nt13.39□□□□□ -0.27
CEP3P40969 YSC84YHR016C 1407 nt13.34□□□□□ -0.27
CEP3P40969 WWM1YFL010C 636 nt13.33□□□□□ -0.28
CEP3P40969 SUF2tP(AGG)C 72 nt13.32□□□□□ -0.28
CEP3P40969 SUF10tP(AGG)N 72 nt13.32□□□□□ -0.28
Retrieved 100 of 7,029 protein–RNA pairs in 39.4 ms