Protein–RNA interactions for Protein: Q05775

HCR1, Eukaryotic translation initiation factor 3 subunit J, yeastyeast

Known RBP Predictions only

Length 265 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
HCR1Q05775 NSR1YGR159C 1245 nt22.5■■□□□ 1.19
HCR1Q05775 YML009W-BYML009W-B 477 nt22.37■■□□□ 1.17
HCR1Q05775 NOP1YDL014W 984 nt21.66■■□□□ 1.06
HCR1Q05775 MDJ1YFL016C 1536 nt20.2■□□□□ 0.82
HCR1Q05775 YKL036CYKL036C 393 nt19.75■□□□□ 0.75
HCR1Q05775 SRX1YKL086W 384 nt18.91■□□□□ 0.62
HCR1Q05775 Q0297Q0297 156 nt18.85■□□□□ 0.61
HCR1Q05775 YJL027CYJL027C 417 nt18.65■□□□□ 0.58
HCR1Q05775 SCS3YGL126W 1143 nt18.22■□□□□ 0.51
HCR1Q05775 YCR051WYCR051W 669 nt17.91■□□□□ 0.46
HCR1Q05775 DBP2YNL112W 1641 nt17.76■□□□□ 0.43
HCR1Q05775 YBR190WYBR190W 312 nt17.33■□□□□ 0.36
HCR1Q05775 TRN1tP(UGG)A 72 nt17.26■□□□□ 0.35
HCR1Q05775 SUF9tP(UGG)F 72 nt17.26■□□□□ 0.35
HCR1Q05775 SUF8tP(UGG)H 72 nt17.26■□□□□ 0.35
HCR1Q05775 tP(UGG)LtP(UGG)L 72 nt17.26■□□□□ 0.35
HCR1Q05775 SUF7tP(UGG)M 72 nt17.26■□□□□ 0.35
HCR1Q05775 tP(UGG)N1tP(UGG)N1 72 nt17.26■□□□□ 0.35
HCR1Q05775 tP(UGG)N2tP(UGG)N2 72 nt17.26■□□□□ 0.35
HCR1Q05775 tP(UGG)O1tP(UGG)O1 72 nt17.26■□□□□ 0.35
HCR1Q05775 SUF11tP(UGG)O2 72 nt17.26■□□□□ 0.35
HCR1Q05775 CCC1YLR220W 969 nt17.07■□□□□ 0.32
HCR1Q05775 YOL085CYOL085C 342 nt17.06■□□□□ 0.32
HCR1Q05775 SCJ1YMR214W 1134 nt16.94■□□□□ 0.3
HCR1Q05775 RTC3YHR087W 336 nt16.92■□□□□ 0.3
HCR1Q05775 RPP1BYDL130W 321 nt16.91■□□□□ 0.3
HCR1Q05775 PKP1YIL042C 1185 nt16.82■□□□□ 0.28
HCR1Q05775 RVS167YDR388W 1449 nt16.68■□□□□ 0.26
HCR1Q05775 ATS1YAL020C 1002 nt16.46■□□□□ 0.23
HCR1Q05775 tP(UGG)O3tP(UGG)O3 72 nt16.23■□□□□ 0.19
HCR1Q05775 PET122YER153C 765 nt16.17■□□□□ 0.18
HCR1Q05775 SHR5YOL110W 714 nt16.02■□□□□ 0.16
HCR1Q05775 SCR1SCR1 522 nt15.96■□□□□ 0.15
HCR1Q05775 PUT4YOR348C 1884 nt15.94■□□□□ 0.14
HCR1Q05775 URN1YPR152C 1398 nt15.74■□□□□ 0.11
HCR1Q05775 YDJ1YNL064C 1230 nt15.71■□□□□ 0.11
HCR1Q05775 RRN5YLR141W 1092 nt15.68■□□□□ 0.1
HCR1Q05775 DEP1YAL013W 1218 nt15.63■□□□□ 0.09
HCR1Q05775 OPI9YLR338W 858 nt15.57■□□□□ 0.08
HCR1Q05775 ARE1YCR048W 1833 nt15.57■□□□□ 0.08
HCR1Q05775 SAH1YER043C 1350 nt15.52■□□□□ 0.08
HCR1Q05775 SSA3YBL075C 1950 nt15.52■□□□□ 0.07
HCR1Q05775 RPN10YHR200W 807 nt15.47■□□□□ 0.07
HCR1Q05775 POA1YBR022W 534 nt15.41■□□□□ 0.06
HCR1Q05775 GAR1YHR089C 618 nt15.39■□□□□ 0.05
HCR1Q05775 YNL208WYNL208W 600 nt15.39■□□□□ 0.05
HCR1Q05775 YER088W-BYER088W-B 147 nt15.37■□□□□ 0.05
HCR1Q05775 YHR049C-AYHR049C-A 297 nt15.36■□□□□ 0.05
HCR1Q05775 RSB1YOR049C 1065 nt15.28■□□□□ 0.04
HCR1Q05775 PST2YDR032C 597 nt15.13■□□□□ 0.01
HCR1Q05775 PUN1YLR414C 792 nt15.13■□□□□ 0.01
HCR1Q05775 BSC6YOL137W 1494 nt15.13■□□□□ 0.01
HCR1Q05775 YJR018WYJR018W 363 nt15□□□□□ -0.01
HCR1Q05775 BUD23YCR047C 828 nt14.99□□□□□ -0.01
HCR1Q05775 PTC2YER089C 1395 nt14.98□□□□□ -0.01
HCR1Q05775 TIR1YER011W 765 nt14.9□□□□□ -0.02
HCR1Q05775 YKL097CYKL097C 411 nt14.89□□□□□ -0.03
HCR1Q05775 NAB2YGL122C 1578 nt14.84□□□□□ -0.03
HCR1Q05775 SSA1YAL005C 1929 nt14.76□□□□□ -0.05
HCR1Q05775 YJR120WYJR120W 351 nt14.67□□□□□ -0.06
HCR1Q05775 RPP2BYDR382W 333 nt14.64□□□□□ -0.07
HCR1Q05775 SPT5YML010W 3192 nt14.63□□□□□ -0.07
HCR1Q05775 DAL1YIR027C 1383 nt14.59□□□□□ -0.07
HCR1Q05775 FIS1YIL065C 468 nt14.58□□□□□ -0.08
HCR1Q05775 FPR4YLR449W 1179 nt14.52□□□□□ -0.09
HCR1Q05775 INM2YDR287W 879 nt14.51□□□□□ -0.09
HCR1Q05775 PHO4YFR034C 939 nt14.43□□□□□ -0.1
HCR1Q05775 SRB2YHR041C 633 nt14.43□□□□□ -0.1
HCR1Q05775 SHU1YHL006C 453 nt14.36□□□□□ -0.11
HCR1Q05775 YBL100CYBL100C 315 nt14.32□□□□□ -0.12
HCR1Q05775 BDH2YAL061W 1254 nt14.29□□□□□ -0.12
HCR1Q05775 YPS1YLR120C 1710 nt14.27□□□□□ -0.13
HCR1Q05775 MEP2YNL142W 1500 nt14.24□□□□□ -0.13
HCR1Q05775 SSA4YER103W 1929 nt14.22□□□□□ -0.13
HCR1Q05775 WWM1YFL010C 636 nt14.18□□□□□ -0.14
HCR1Q05775 FUN26YAL022C 1554 nt14.13□□□□□ -0.15
HCR1Q05775 YDR095CYDR095C 411 nt14.12□□□□□ -0.15
HCR1Q05775 YHR165W-AYHR165W-A 312 nt14.12□□□□□ -0.15
HCR1Q05775 YOR139CYOR139C 393 nt14.09□□□□□ -0.15
HCR1Q05775 LSM3YLR438C-A 270 nt14.07□□□□□ -0.16
HCR1Q05775 TRM9YML014W 840 nt14.07□□□□□ -0.16
HCR1Q05775 YGR021WYGR021W 873 nt14.05□□□□□ -0.16
HCR1Q05775 YAL037C-BYAL037C-B 975 nt14.01□□□□□ -0.17
HCR1Q05775 ALF1YNL148C 765 nt14□□□□□ -0.17
HCR1Q05775 DCW1YKL046C 1350 nt13.99□□□□□ -0.17
HCR1Q05775 YFL021C-AYFL021C-A 855 nt13.98□□□□□ -0.17
HCR1Q05775 NPL3YDR432W 1245 nt13.97□□□□□ -0.17
HCR1Q05775 HOM6YJR139C 1080 nt13.96□□□□□ -0.17
HCR1Q05775 CCT6YDR188W 1641 nt13.94□□□□□ -0.18
HCR1Q05775 RPP2AYOL039W 321 nt13.87□□□□□ -0.19
HCR1Q05775 SUF2tP(AGG)C 72 nt13.86□□□□□ -0.19
HCR1Q05775 SUF10tP(AGG)N 72 nt13.86□□□□□ -0.19
HCR1Q05775 MNP1YGL068W 585 nt13.83□□□□□ -0.2
HCR1Q05775 EMI2YDR516C 1503 nt13.83□□□□□ -0.2
HCR1Q05775 PTP1YDL230W 1008 nt13.81□□□□□ -0.2
HCR1Q05775 YMR090WYMR090W 684 nt13.79□□□□□ -0.2
HCR1Q05775 SIS1YNL007C 1059 nt13.79□□□□□ -0.2
HCR1Q05775 RKM5YLR137W 1104 nt13.76□□□□□ -0.21
HCR1Q05775 CAC2YML102W 1407 nt13.74□□□□□ -0.21
HCR1Q05775 BDF1YLR399C 2061 nt13.7□□□□□ -0.22
Retrieved 100 of 7,029 protein–RNA pairs in 20.4 ms