Protein–RNA interactions for Protein: P33298

RPT3, 26S proteasome regulatory subunit 6B homolog, yeastyeast

Known RBP Predictions only

Length 428 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT3P33298 YML009W-BYML009W-B 477 nt24.43■■□□□ 1.5
RPT3P33298 NSR1YGR159C 1245 nt24■■□□□ 1.43
RPT3P33298 NOP1YDL014W 984 nt23.82■■□□□ 1.4
RPT3P33298 YKL036CYKL036C 393 nt22.34■■□□□ 1.17
RPT3P33298 MDJ1YFL016C 1536 nt21.07■□□□□ 0.96
RPT3P33298 Q0297Q0297 156 nt21.05■□□□□ 0.96
RPT3P33298 YJL027CYJL027C 417 nt20.91■□□□□ 0.94
RPT3P33298 SRX1YKL086W 384 nt20.89■□□□□ 0.93
RPT3P33298 SCS3YGL126W 1143 nt20.56■□□□□ 0.88
RPT3P33298 YCR051WYCR051W 669 nt19.81■□□□□ 0.76
RPT3P33298 YOL085CYOL085C 342 nt19.4■□□□□ 0.7
RPT3P33298 PKP1YIL042C 1185 nt19.07■□□□□ 0.64
RPT3P33298 RPP1BYDL130W 321 nt18.87■□□□□ 0.61
RPT3P33298 DBP2YNL112W 1641 nt18.85■□□□□ 0.61
RPT3P33298 TRN1tP(UGG)A 72 nt18.73■□□□□ 0.59
RPT3P33298 SUF9tP(UGG)F 72 nt18.73■□□□□ 0.59
RPT3P33298 SUF8tP(UGG)H 72 nt18.73■□□□□ 0.59
RPT3P33298 tP(UGG)LtP(UGG)L 72 nt18.73■□□□□ 0.59
RPT3P33298 SUF7tP(UGG)M 72 nt18.73■□□□□ 0.59
RPT3P33298 tP(UGG)N1tP(UGG)N1 72 nt18.73■□□□□ 0.59
RPT3P33298 tP(UGG)N2tP(UGG)N2 72 nt18.73■□□□□ 0.59
RPT3P33298 tP(UGG)O1tP(UGG)O1 72 nt18.73■□□□□ 0.59
RPT3P33298 SUF11tP(UGG)O2 72 nt18.73■□□□□ 0.59
RPT3P33298 SCJ1YMR214W 1134 nt18.55■□□□□ 0.56
RPT3P33298 CCC1YLR220W 969 nt18.5■□□□□ 0.55
RPT3P33298 ATS1YAL020C 1002 nt18.47■□□□□ 0.55
RPT3P33298 PET122YER153C 765 nt18.03■□□□□ 0.48
RPT3P33298 tP(UGG)O3tP(UGG)O3 72 nt17.82■□□□□ 0.44
RPT3P33298 YBR190WYBR190W 312 nt17.82■□□□□ 0.44
RPT3P33298 SCR1SCR1 522 nt17.81■□□□□ 0.44
RPT3P33298 RVS167YDR388W 1449 nt17.6■□□□□ 0.41
RPT3P33298 RRN5YLR141W 1092 nt17.54■□□□□ 0.4
RPT3P33298 RTC3YHR087W 336 nt17.4■□□□□ 0.38
RPT3P33298 RSB1YOR049C 1065 nt17.22■□□□□ 0.35
RPT3P33298 YER088W-BYER088W-B 147 nt17.21■□□□□ 0.35
RPT3P33298 YDJ1YNL064C 1230 nt17.21■□□□□ 0.35
RPT3P33298 SHR5YOL110W 714 nt17.14■□□□□ 0.33
RPT3P33298 PST2YDR032C 597 nt17.08■□□□□ 0.32
RPT3P33298 GAR1YHR089C 618 nt16.79■□□□□ 0.28
RPT3P33298 DEP1YAL013W 1218 nt16.57■□□□□ 0.24
RPT3P33298 YKL097CYKL097C 411 nt16.5■□□□□ 0.23
RPT3P33298 URN1YPR152C 1398 nt16.46■□□□□ 0.23
RPT3P33298 SHU1YHL006C 453 nt16.32■□□□□ 0.2
RPT3P33298 YNL208WYNL208W 600 nt16.3■□□□□ 0.2
RPT3P33298 TIR1YER011W 765 nt16.2■□□□□ 0.18
RPT3P33298 RPN10YHR200W 807 nt16.2■□□□□ 0.18
RPT3P33298 OPI9YLR338W 858 nt16.16■□□□□ 0.18
RPT3P33298 PUT4YOR348C 1884 nt16.02■□□□□ 0.16
RPT3P33298 SSA1YAL005C 1929 nt16.01■□□□□ 0.15
RPT3P33298 SAH1YER043C 1350 nt16■□□□□ 0.15
RPT3P33298 YAL037C-BYAL037C-B 975 nt15.96■□□□□ 0.15
RPT3P33298 SRB2YHR041C 633 nt15.91■□□□□ 0.14
RPT3P33298 YOR139CYOR139C 393 nt15.89■□□□□ 0.13
RPT3P33298 ARE1YCR048W 1833 nt15.84■□□□□ 0.13
RPT3P33298 YJR018WYJR018W 363 nt15.71■□□□□ 0.11
RPT3P33298 YJR120WYJR120W 351 nt15.69■□□□□ 0.1
RPT3P33298 PUN1YLR414C 792 nt15.65■□□□□ 0.1
RPT3P33298 WWM1YFL010C 636 nt15.58■□□□□ 0.08
RPT3P33298 YHR049C-AYHR049C-A 297 nt15.57■□□□□ 0.08
RPT3P33298 HOM6YJR139C 1080 nt15.56■□□□□ 0.08
RPT3P33298 NPL3YDR432W 1245 nt15.55■□□□□ 0.08
RPT3P33298 MNP1YGL068W 585 nt15.54■□□□□ 0.08
RPT3P33298 YGR021WYGR021W 873 nt15.5■□□□□ 0.07
RPT3P33298 POA1YBR022W 534 nt15.5■□□□□ 0.07
RPT3P33298 SSA3YBL075C 1950 nt15.45■□□□□ 0.06
RPT3P33298 PTC2YER089C 1395 nt15.45■□□□□ 0.06
RPT3P33298 RPP2BYDR382W 333 nt15.41■□□□□ 0.06
RPT3P33298 YOL037CYOL037C 354 nt15.33■□□□□ 0.04
RPT3P33298 RKM5YLR137W 1104 nt15.31■□□□□ 0.04
RPT3P33298 YFL021C-AYFL021C-A 855 nt15.27■□□□□ 0.04
RPT3P33298 tM(CAU)CtM(CAU)C 72 nt15.23■□□□□ 0.03
RPT3P33298 IMT4tM(CAU)E 72 nt15.23■□□□□ 0.03
RPT3P33298 IMT3tM(CAU)J3 72 nt15.23■□□□□ 0.03
RPT3P33298 IMT1tM(CAU)O1 72 nt15.23■□□□□ 0.03
RPT3P33298 IMT2tM(CAU)P 72 nt15.23■□□□□ 0.03
RPT3P33298 BDH2YAL061W 1254 nt15.23■□□□□ 0.03
RPT3P33298 BUD23YCR047C 828 nt15.19■□□□□ 0.02
RPT3P33298 NAB2YGL122C 1578 nt15.17■□□□□ 0.02
RPT3P33298 BSC6YOL137W 1494 nt15.11■□□□□ 0.01
RPT3P33298 INM2YDR287W 879 nt15.08■□□□□ 0
RPT3P33298 FIS1YIL065C 468 nt15.08■□□□□ 0
RPT3P33298 LSM3YLR438C-A 270 nt15.08■□□□□ 0
RPT3P33298 DAL1YIR027C 1383 nt15.05■□□□□ -0
RPT3P33298 YLR281CYLR281C 468 nt15.02■□□□□ -0
RPT3P33298 YBL100CYBL100C 315 nt15.02■□□□□ -0
RPT3P33298 FPR4YLR449W 1179 nt14.99□□□□□ -0.01
RPT3P33298 PUS2YGL063W 1113 nt14.95□□□□□ -0.02
RPT3P33298 PHO4YFR034C 939 nt14.93□□□□□ -0.02
RPT3P33298 WHI5YOR083W 888 nt14.9□□□□□ -0.02
RPT3P33298 FUN26YAL022C 1554 nt14.88□□□□□ -0.03
RPT3P33298 TRM9YML014W 840 nt14.85□□□□□ -0.03
RPT3P33298 CCT6YDR188W 1641 nt14.74□□□□□ -0.05
RPT3P33298 YPR011CYPR011C 981 nt14.74□□□□□ -0.05
RPT3P33298 MOT3YMR070W 1473 nt14.74□□□□□ -0.05
RPT3P33298 YLR236CYLR236C 324 nt14.65□□□□□ -0.06
RPT3P33298 YLR154C-GYLR154C-G 150 nt14.63□□□□□ -0.07
RPT3P33298 DSK2YMR276W 1122 nt14.61□□□□□ -0.07
RPT3P33298 FMP45YDL222C 930 nt14.57□□□□□ -0.08
RPT3P33298 YPS1YLR120C 1710 nt14.54□□□□□ -0.08
RPT3P33298 SPT5YML010W 3192 nt14.53□□□□□ -0.08
Retrieved 100 of 7,029 protein–RNA pairs in 16.3 ms