RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	HST2	P53686	357 aa		5	□□□□□ -1.61
SSB1	YDL229W	JIP5	Q06214	492 aa	Predicted RBP	5	□□□□□ -1.61
SSB1	YDL229W	MDM38	Q08179	573 aa		5	□□□□□ -1.61
SSB1	YDL229W	HSP42	Q12329	375 aa		5	□□□□□ -1.61
SSB1	YDL229W	WHI5	Q12416	295 aa		5	□□□□□ -1.61
SSB1	YDL229W	TOP2	P06786	1428 aa	Known RBP	4.99	□□□□□ -1.61
SSB1	YDL229W	YEF3	P16521	1044 aa	Known RBP	4.99	□□□□□ -1.61
SSB1	YDL229W	MYO2	P19524	1574 aa	Known RBP	4.99	□□□□□ -1.61
SSB1	YDL229W	BRF1	P29056	596 aa		4.99	□□□□□ -1.61
SSB1	YDL229W	CCM1	P48237	864 aa	Predicted RBP	4.99	□□□□□ -1.61
SSB1	YDL229W	PRP43	P53131	767 aa	Known RBP	4.99	□□□□□ -1.61
SSB1	YDL229W	NOP7	P53261	605 aa	Known RBP	4.99	□□□□□ -1.61
SSB1	YDL229W	REX2	P54964	269 aa	Known RBP	4.99	□□□□□ -1.61
SSB1	YDL229W	MMS1	Q06211	1407 aa		4.99	□□□□□ -1.61
SSB1	YDL229W	ATG26	Q06321	1198 aa		4.99	□□□□□ -1.61
SSB1	YDL229W	AVO1	Q08236	1176 aa		4.99	□□□□□ -1.61
SSB1	YDL229W	APC2	Q12440	853 aa		4.99	□□□□□ -1.61
SSB1	YDL229W	LSO1	Q3E827	93 aa		4.99	□□□□□ -1.61
SSB1	YDL229W	CLB1	P24868	471 aa		4.98	□□□□□ -1.61
SSB1	YDL229W	KDX1	P36005	433 aa		4.98	□□□□□ -1.61
SSB1	YDL229W	YNL058C	P53947	316 aa		4.98	□□□□□ -1.61
SSB1	YDL229W	YML119W	Q03208	357 aa		4.98	□□□□□ -1.61
SSB1	YDL229W	YPK9	Q12697	1472 aa		4.98	□□□□□ -1.61
SSB1	YDL229W	EFM2	P38347	419 aa		4.97	□□□□□ -1.61
SSB1	YDL229W	CHZ1	P40019	153 aa	Predicted RBP	4.97	□□□□□ -1.61
SSB1	YDL229W	RPL17B	P46990	184 aa	Known RBP	4.97	□□□□□ -1.61
SSB1	YDL229W	CTF4	Q01454	927 aa		4.97	□□□□□ -1.61
SSB1	YDL229W	TFB4	Q12004	338 aa		4.97	□□□□□ -1.61
SSB1	YDL229W	SGT2	Q12118	346 aa	Known RBP	4.97	□□□□□ -1.61
SSB1	YDL229W	RUD3	Q12234	484 aa	Known RBP	4.97	□□□□□ -1.61
SSB1	YDL229W	CEX1	Q12453	761 aa		4.97	□□□□□ -1.61
SSB1	YDL229W	CDC31	P06704	161 aa	Known RBP	4.97	□□□□□ -1.61
SSB1	YDL229W	SWI6	P09959	803 aa		4.97	□□□□□ -1.61
SSB1	YDL229W	PSE1	P32337	1089 aa	Known RBP	4.97	□□□□□ -1.61
SSB1	YDL229W	ELM1	P32801	640 aa		4.97	□□□□□ -1.61
SSB1	YDL229W	STE5	P32917	917 aa		4.97	□□□□□ -1.61
SSB1	YDL229W	NUF2	P33895	451 aa		4.97	□□□□□ -1.61
SSB1	YDL229W	SWH1	P35845	1188 aa		4.97	□□□□□ -1.61
SSB1	YDL229W	PMC1	P38929	1173 aa	Predicted RBP	4.97	□□□□□ -1.61
SSB1	YDL229W	POL5	P39985	1022 aa	Known RBP	4.97	□□□□□ -1.61
SSB1	YDL229W	MSH6	Q03834	1242 aa		4.97	□□□□□ -1.61
SSB1	YDL229W	YDR338C	Q05497	695 aa		4.97	□□□□□ -1.61
SSB1	YDL229W	OPI1	P21957	404 aa		4.96	□□□□□ -1.62
SSB1	YDL229W	MSM1	P22438	575 aa		4.96	□□□□□ -1.62
SSB1	YDL229W	UGA3	P26370	528 aa		4.96	□□□□□ -1.62
SSB1	YDL229W	NFU1	P32860	256 aa		4.96	□□□□□ -1.62
SSB1	YDL229W	IAH1	P41734	238 aa		4.96	□□□□□ -1.62
SSB1	YDL229W	BFA1	P47113	574 aa		4.96	□□□□□ -1.62
SSB1	YDL229W	YNL247W	P53852	767 aa	Known RBP	4.96	□□□□□ -1.62
SSB1	YDL229W	RIA1	P53893	1110 aa		4.96	□□□□□ -1.62
SSB1	YDL229W	PEX19	Q07418	342 aa		4.96	□□□□□ -1.62
SSB1	YDL229W	NOT3	P06102	836 aa	Known RBP	4.95	□□□□□ -1.62
SSB1	YDL229W	RAD3	P06839	778 aa		4.95	□□□□□ -1.62
SSB1	YDL229W	RAD16	P31244	790 aa		4.95	□□□□□ -1.62
SSB1	YDL229W	TIM11	P81449	96 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB1	YDL229W	HEH2	Q03281	663 aa		4.95	□□□□□ -1.62
SSB1	YDL229W	UBX5	Q06682	500 aa		4.95	□□□□□ -1.62
SSB1	YDL229W	APC5	Q08683	685 aa		4.95	□□□□□ -1.62
SSB1	YDL229W	NOP14	Q99207	810 aa	Known RBP	4.95	□□□□□ -1.62
SSB1	YDL229W	MYO4	P32492	1471 aa		4.95	□□□□□ -1.62
SSB1	YDL229W	PEX5	P35056	612 aa		4.95	□□□□□ -1.62
SSB1	YDL229W	SEC26	P41810	973 aa	Known RBP	4.95	□□□□□ -1.62
SSB1	YDL229W	OCA1	P50946	238 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB1	YDL229W	ELA1	P53861	379 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB1	YDL229W	SMD2	Q06217	110 aa	Known RBP	4.95	□□□□□ -1.62
SSB1	YDL229W	PUS1	Q12211	544 aa	Known RBP	4.95	□□□□□ -1.62
SSB1	YDL229W	SNU66	Q12420	587 aa	Predicted RBP	4.95	□□□□□ -1.62
SSB1	YDL229W	SCC2	Q04002	1493 aa		4.95	□□□□□ -1.62
SSB1	YDL229W	ARC19	P33204	171 aa	Known RBP	4.94	□□□□□ -1.62
SSB1	YDL229W	MUM2	P38236	366 aa		4.94	□□□□□ -1.62
SSB1	YDL229W	MAM1	P40065	302 aa		4.94	□□□□□ -1.62
SSB1	YDL229W	MEP1	P40260	492 aa		4.94	□□□□□ -1.62
SSB1	YDL229W	MRD1	Q06106	887 aa	Known RBP	4.94	□□□□□ -1.62
SSB1	YDL229W	SAC3	P46674	1301 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	MPH3	P0CE00	602 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	ESL2	P36168	1195 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	UBP13	P38187	747 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	OLA1	P38219	394 aa	Known RBP	4.93	□□□□□ -1.62
SSB1	YDL229W	YLF2	P38746	405 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	DNM1	P54861	757 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	PCL8	Q08966	492 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	SEC39	Q12745	709 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	BRR1	Q99177	341 aa	Predicted RBP	4.93	□□□□□ -1.62
SSB1	YDL229W	TRS33	Q99394	268 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	FAR1	P21268	830 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	PWP2	P25635	923 aa	Known RBP	4.93	□□□□□ -1.62
SSB1	YDL229W	RME1	P32338	300 aa	Known RBP	4.93	□□□□□ -1.62
SSB1	YDL229W	PPH3	P32345	308 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	DPH5	P32469	300 aa	Predicted RBP	4.93	□□□□□ -1.62
SSB1	YDL229W	CIN4	P39110	191 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	ERP2	P39704	215 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	MPH1	P40562	993 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	RAD17	P48581	401 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	RNT1	Q02555	471 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	VPS60	Q03390	229 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	VPS20	Q04272	221 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	YDL121C	Q07541	149 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	RKM4	Q12504	494 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	TY4A-H	Q6Q5P6	413 aa		4.93	□□□□□ -1.62
SSB1	YDL229W	THR4	P16120	514 aa	Known RBP	4.92	□□□□□ -1.62

Retrieved 100 of 5,963 RNA–protein pairs in 27.2 ms