Protein–RNA interactions for Protein: Q99177

BRR1, Pre-mRNA-splicing factor BRR1, yeastyeast

Predicted RBP Predictions only

Length 341 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
BRR1Q99177 YML009W-BYML009W-B 477 nt19.84■□□□□ 0.77
BRR1Q99177 NSR1YGR159C 1245 nt19.79■□□□□ 0.76
BRR1Q99177 NOP1YDL014W 984 nt19.42■□□□□ 0.7
BRR1Q99177 YKL036CYKL036C 393 nt17.81■□□□□ 0.44
BRR1Q99177 MDJ1YFL016C 1536 nt17.42■□□□□ 0.38
BRR1Q99177 Q0297Q0297 156 nt16.88■□□□□ 0.29
BRR1Q99177 SRX1YKL086W 384 nt16.87■□□□□ 0.29
BRR1Q99177 YJL027CYJL027C 417 nt16.63■□□□□ 0.25
BRR1Q99177 SCS3YGL126W 1143 nt16.1■□□□□ 0.17
BRR1Q99177 YCR051WYCR051W 669 nt16■□□□□ 0.15
BRR1Q99177 DBP2YNL112W 1641 nt15.36■□□□□ 0.05
BRR1Q99177 YOL085CYOL085C 342 nt15.36■□□□□ 0.05
BRR1Q99177 TRN1tP(UGG)A 72 nt15.21■□□□□ 0.03
BRR1Q99177 SUF9tP(UGG)F 72 nt15.21■□□□□ 0.03
BRR1Q99177 SUF8tP(UGG)H 72 nt15.21■□□□□ 0.03
BRR1Q99177 tP(UGG)LtP(UGG)L 72 nt15.21■□□□□ 0.03
BRR1Q99177 SUF7tP(UGG)M 72 nt15.21■□□□□ 0.03
BRR1Q99177 tP(UGG)N1tP(UGG)N1 72 nt15.21■□□□□ 0.03
BRR1Q99177 tP(UGG)N2tP(UGG)N2 72 nt15.21■□□□□ 0.03
BRR1Q99177 tP(UGG)O1tP(UGG)O1 72 nt15.21■□□□□ 0.03
BRR1Q99177 SUF11tP(UGG)O2 72 nt15.21■□□□□ 0.03
BRR1Q99177 RPP1BYDL130W 321 nt15.15■□□□□ 0.02
BRR1Q99177 PKP1YIL042C 1185 nt15.07■□□□□ 0
BRR1Q99177 CCC1YLR220W 969 nt15.07■□□□□ 0
BRR1Q99177 SSA3YBL075C 1950 nt15.05■□□□□ -0
BRR1Q99177 YBR190WYBR190W 312 nt14.99□□□□□ -0.01
BRR1Q99177 RVS167YDR388W 1449 nt14.72□□□□□ -0.05
BRR1Q99177 RTC3YHR087W 336 nt14.69□□□□□ -0.06
BRR1Q99177 ATS1YAL020C 1002 nt14.43□□□□□ -0.1
BRR1Q99177 SCR1SCR1 522 nt14.43□□□□□ -0.1
BRR1Q99177 PET122YER153C 765 nt14.4□□□□□ -0.1
BRR1Q99177 tP(UGG)O3tP(UGG)O3 72 nt14.39□□□□□ -0.11
BRR1Q99177 SCJ1YMR214W 1134 nt14.39□□□□□ -0.11
BRR1Q99177 SHR5YOL110W 714 nt14.1□□□□□ -0.15
BRR1Q99177 RRN5YLR141W 1092 nt14.01□□□□□ -0.17
BRR1Q99177 YDJ1YNL064C 1230 nt13.97□□□□□ -0.17
BRR1Q99177 PUT4YOR348C 1884 nt13.78□□□□□ -0.2
BRR1Q99177 RSB1YOR049C 1065 nt13.77□□□□□ -0.21
BRR1Q99177 YER088W-BYER088W-B 147 nt13.72□□□□□ -0.21
BRR1Q99177 URN1YPR152C 1398 nt13.68□□□□□ -0.22
BRR1Q99177 RPN10YHR200W 807 nt13.64□□□□□ -0.23
BRR1Q99177 GAR1YHR089C 618 nt13.61□□□□□ -0.23
BRR1Q99177 DEP1YAL013W 1218 nt13.61□□□□□ -0.23
BRR1Q99177 YNL208WYNL208W 600 nt13.52□□□□□ -0.25
BRR1Q99177 OPI9YLR338W 858 nt13.5□□□□□ -0.25
BRR1Q99177 SAH1YER043C 1350 nt13.35□□□□□ -0.27
BRR1Q99177 PST2YDR032C 597 nt13.33□□□□□ -0.28
BRR1Q99177 ARE1YCR048W 1833 nt13.26□□□□□ -0.29
BRR1Q99177 POA1YBR022W 534 nt13.22□□□□□ -0.29
BRR1Q99177 SPT5YML010W 3192 nt13.18□□□□□ -0.3
BRR1Q99177 TIR1YER011W 765 nt13.18□□□□□ -0.3
BRR1Q99177 PUN1YLR414C 792 nt13.18□□□□□ -0.3
BRR1Q99177 YHR049C-AYHR049C-A 297 nt13.12□□□□□ -0.31
BRR1Q99177 BSC6YOL137W 1494 nt13.11□□□□□ -0.31
BRR1Q99177 YJR018WYJR018W 363 nt13.08□□□□□ -0.32
BRR1Q99177 SSA4YER103W 1929 nt13.07□□□□□ -0.32
BRR1Q99177 PTC2YER089C 1395 nt12.94□□□□□ -0.34
BRR1Q99177 RPP2BYDR382W 333 nt12.93□□□□□ -0.34
BRR1Q99177 SSA1YAL005C 1929 nt12.93□□□□□ -0.34
BRR1Q99177 PAC11YDR488C 1602 nt12.91□□□□□ -0.34
BRR1Q99177 NVJ2YPR091C 2313 nt12.91□□□□□ -0.34
BRR1Q99177 YKL097CYKL097C 411 nt12.88□□□□□ -0.35
BRR1Q99177 BUD23YCR047C 828 nt12.87□□□□□ -0.35
BRR1Q99177 FPS1YLL043W 2010 nt12.84□□□□□ -0.35
BRR1Q99177 NAB2YGL122C 1578 nt12.83□□□□□ -0.36
BRR1Q99177 SHU1YHL006C 453 nt12.75□□□□□ -0.37
BRR1Q99177 INM2YDR287W 879 nt12.69□□□□□ -0.38
BRR1Q99177 BDF1YLR399C 2061 nt12.68□□□□□ -0.38
BRR1Q99177 YJR120WYJR120W 351 nt12.66□□□□□ -0.38
BRR1Q99177 DAL1YIR027C 1383 nt12.64□□□□□ -0.39
BRR1Q99177 YGR021WYGR021W 873 nt12.61□□□□□ -0.39
BRR1Q99177 FPR4YLR449W 1179 nt12.61□□□□□ -0.39
BRR1Q99177 BDH2YAL061W 1254 nt12.57□□□□□ -0.4
BRR1Q99177 SRB2YHR041C 633 nt12.54□□□□□ -0.4
BRR1Q99177 YAL037C-BYAL037C-B 975 nt12.54□□□□□ -0.4
BRR1Q99177 WWM1YFL010C 636 nt12.53□□□□□ -0.4
BRR1Q99177 FIS1YIL065C 468 nt12.51□□□□□ -0.41
BRR1Q99177 TAT1YBR069C 1860 nt12.51□□□□□ -0.41
BRR1Q99177 YBL100CYBL100C 315 nt12.5□□□□□ -0.41
BRR1Q99177 PHO4YFR034C 939 nt12.47□□□□□ -0.41
BRR1Q99177 LSM3YLR438C-A 270 nt12.45□□□□□ -0.42
BRR1Q99177 YFL021C-AYFL021C-A 855 nt12.44□□□□□ -0.42
BRR1Q99177 MEP2YNL142W 1500 nt12.43□□□□□ -0.42
BRR1Q99177 HOM6YJR139C 1080 nt12.43□□□□□ -0.42
BRR1Q99177 TRM9YML014W 840 nt12.39□□□□□ -0.43
BRR1Q99177 FUN26YAL022C 1554 nt12.32□□□□□ -0.44
BRR1Q99177 NPL3YDR432W 1245 nt12.31□□□□□ -0.44
BRR1Q99177 MNP1YGL068W 585 nt12.3□□□□□ -0.44
BRR1Q99177 RKM5YLR137W 1104 nt12.27□□□□□ -0.45
BRR1Q99177 ALF1YNL148C 765 nt12.26□□□□□ -0.45
BRR1Q99177 YOL037CYOL037C 354 nt12.26□□□□□ -0.45
BRR1Q99177 SUF2tP(AGG)C 72 nt12.22□□□□□ -0.45
BRR1Q99177 SUF10tP(AGG)N 72 nt12.22□□□□□ -0.45
BRR1Q99177 YOR139CYOR139C 393 nt12.22□□□□□ -0.45
BRR1Q99177 YPS1YLR120C 1710 nt12.22□□□□□ -0.45
BRR1Q99177 YJL225CYJL225C 5277 nt12.2□□□□□ -0.46
BRR1Q99177 CCT6YDR188W 1641 nt12.19□□□□□ -0.46
BRR1Q99177 DCW1YKL046C 1350 nt12.16□□□□□ -0.46
BRR1Q99177 YDR095CYDR095C 411 nt12.15□□□□□ -0.46
BRR1Q99177 YHR165W-AYHR165W-A 312 nt12.15□□□□□ -0.46
Retrieved 100 of 7,029 protein–RNA pairs in 13.7 ms