Protein–RNA interactions for Protein: P53852

YNL247W, Cysteine--tRNA ligase, yeastyeast

Known RBP Predictions only

Length 767 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YNL247WP53852 YML009W-BYML009W-B 477 nt21.3■■□□□ 1
YNL247WP53852 NSR1YGR159C 1245 nt21.22■□□□□ 0.99
YNL247WP53852 NOP1YDL014W 984 nt20.7■□□□□ 0.9
YNL247WP53852 YKL036CYKL036C 393 nt18.97■□□□□ 0.63
YNL247WP53852 MDJ1YFL016C 1536 nt18.9■□□□□ 0.62
YNL247WP53852 SRX1YKL086W 384 nt18.03■□□□□ 0.48
YNL247WP53852 Q0297Q0297 156 nt18.02■□□□□ 0.48
YNL247WP53852 YJL027CYJL027C 417 nt17.71■□□□□ 0.43
YNL247WP53852 SCS3YGL126W 1143 nt17.17■□□□□ 0.34
YNL247WP53852 YCR051WYCR051W 669 nt17.13■□□□□ 0.33
YNL247WP53852 DBP2YNL112W 1641 nt16.62■□□□□ 0.25
YNL247WP53852 YOL085CYOL085C 342 nt16.39■□□□□ 0.21
YNL247WP53852 TRN1tP(UGG)A 72 nt16.34■□□□□ 0.21
YNL247WP53852 SUF9tP(UGG)F 72 nt16.34■□□□□ 0.21
YNL247WP53852 SUF8tP(UGG)H 72 nt16.34■□□□□ 0.21
YNL247WP53852 tP(UGG)LtP(UGG)L 72 nt16.34■□□□□ 0.21
YNL247WP53852 SUF7tP(UGG)M 72 nt16.34■□□□□ 0.21
YNL247WP53852 tP(UGG)N1tP(UGG)N1 72 nt16.34■□□□□ 0.21
YNL247WP53852 tP(UGG)N2tP(UGG)N2 72 nt16.34■□□□□ 0.21
YNL247WP53852 tP(UGG)O1tP(UGG)O1 72 nt16.34■□□□□ 0.21
YNL247WP53852 SUF11tP(UGG)O2 72 nt16.34■□□□□ 0.21
YNL247WP53852 CCC1YLR220W 969 nt16.21■□□□□ 0.19
YNL247WP53852 RPP1BYDL130W 321 nt16.18■□□□□ 0.18
YNL247WP53852 YBR190WYBR190W 312 nt16.17■□□□□ 0.18
YNL247WP53852 PKP1YIL042C 1185 nt16.16■□□□□ 0.18
YNL247WP53852 RTC3YHR087W 336 nt15.86■□□□□ 0.13
YNL247WP53852 RVS167YDR388W 1449 nt15.78■□□□□ 0.12
YNL247WP53852 SCJ1YMR214W 1134 nt15.53■□□□□ 0.08
YNL247WP53852 SSA3YBL075C 1950 nt15.46■□□□□ 0.07
YNL247WP53852 PET122YER153C 765 nt15.45■□□□□ 0.06
YNL247WP53852 tP(UGG)O3tP(UGG)O3 72 nt15.44■□□□□ 0.06
YNL247WP53852 SCR1SCR1 522 nt15.36■□□□□ 0.05
YNL247WP53852 ATS1YAL020C 1002 nt15.33■□□□□ 0.04
YNL247WP53852 SHR5YOL110W 714 nt15.14■□□□□ 0.01
YNL247WP53852 RRN5YLR141W 1092 nt15□□□□□ -0.01
YNL247WP53852 YDJ1YNL064C 1230 nt14.94□□□□□ -0.02
YNL247WP53852 URN1YPR152C 1398 nt14.77□□□□□ -0.04
YNL247WP53852 DEP1YAL013W 1218 nt14.72□□□□□ -0.05
YNL247WP53852 RSB1YOR049C 1065 nt14.71□□□□□ -0.05
YNL247WP53852 YER088W-BYER088W-B 147 nt14.69□□□□□ -0.06
YNL247WP53852 PUT4YOR348C 1884 nt14.68□□□□□ -0.06
YNL247WP53852 GAR1YHR089C 618 nt14.63□□□□□ -0.07
YNL247WP53852 RPN10YHR200W 807 nt14.61□□□□□ -0.07
YNL247WP53852 OPI9YLR338W 858 nt14.55□□□□□ -0.08
YNL247WP53852 YNL208WYNL208W 600 nt14.52□□□□□ -0.09
YNL247WP53852 SAH1YER043C 1350 nt14.47□□□□□ -0.09
YNL247WP53852 ARE1YCR048W 1833 nt14.39□□□□□ -0.11
YNL247WP53852 YHR049C-AYHR049C-A 297 nt14.26□□□□□ -0.13
YNL247WP53852 POA1YBR022W 534 nt14.25□□□□□ -0.13
YNL247WP53852 PST2YDR032C 597 nt14.18□□□□□ -0.14
YNL247WP53852 PUN1YLR414C 792 nt14.18□□□□□ -0.14
YNL247WP53852 TIR1YER011W 765 nt14.14□□□□□ -0.15
YNL247WP53852 YJR018WYJR018W 363 nt14.09□□□□□ -0.15
YNL247WP53852 PTC2YER089C 1395 nt13.98□□□□□ -0.17
YNL247WP53852 BUD23YCR047C 828 nt13.97□□□□□ -0.17
YNL247WP53852 BSC6YOL137W 1494 nt13.96□□□□□ -0.17
YNL247WP53852 SSA1YAL005C 1929 nt13.94□□□□□ -0.18
YNL247WP53852 RPP2BYDR382W 333 nt13.85□□□□□ -0.19
YNL247WP53852 NAB2YGL122C 1578 nt13.83□□□□□ -0.19
YNL247WP53852 YJR120WYJR120W 351 nt13.73□□□□□ -0.21
YNL247WP53852 YKL097CYKL097C 411 nt13.65□□□□□ -0.22
YNL247WP53852 SHU1YHL006C 453 nt13.64□□□□□ -0.23
YNL247WP53852 FPR4YLR449W 1179 nt13.64□□□□□ -0.23
YNL247WP53852 DAL1YIR027C 1383 nt13.63□□□□□ -0.23
YNL247WP53852 INM2YDR287W 879 nt13.62□□□□□ -0.23
YNL247WP53852 SRB2YHR041C 633 nt13.6□□□□□ -0.23
YNL247WP53852 FIS1YIL065C 468 nt13.57□□□□□ -0.24
YNL247WP53852 PHO4YFR034C 939 nt13.49□□□□□ -0.25
YNL247WP53852 BDH2YAL061W 1254 nt13.49□□□□□ -0.25
YNL247WP53852 WWM1YFL010C 636 nt13.48□□□□□ -0.25
YNL247WP53852 YBL100CYBL100C 315 nt13.47□□□□□ -0.25
YNL247WP53852 YAL037C-BYAL037C-B 975 nt13.45□□□□□ -0.26
YNL247WP53852 YGR021WYGR021W 873 nt13.44□□□□□ -0.26
YNL247WP53852 SSA4YER103W 1929 nt13.33□□□□□ -0.28
YNL247WP53852 HOM6YJR139C 1080 nt13.32□□□□□ -0.28
YNL247WP53852 YFL021C-AYFL021C-A 855 nt13.3□□□□□ -0.28
YNL247WP53852 LSM3YLR438C-A 270 nt13.3□□□□□ -0.28
YNL247WP53852 TRM9YML014W 840 nt13.29□□□□□ -0.28
YNL247WP53852 FUN26YAL022C 1554 nt13.28□□□□□ -0.28
YNL247WP53852 SPT5YML010W 3192 nt13.26□□□□□ -0.29
YNL247WP53852 MNP1YGL068W 585 nt13.24□□□□□ -0.29
YNL247WP53852 YPS1YLR120C 1710 nt13.23□□□□□ -0.29
YNL247WP53852 ALF1YNL148C 765 nt13.19□□□□□ -0.3
YNL247WP53852 YHR165W-AYHR165W-A 312 nt13.16□□□□□ -0.3
YNL247WP53852 YDR095CYDR095C 411 nt13.14□□□□□ -0.31
YNL247WP53852 RKM5YLR137W 1104 nt13.14□□□□□ -0.31
YNL247WP53852 CCT6YDR188W 1641 nt13.11□□□□□ -0.31
YNL247WP53852 MEP2YNL142W 1500 nt13.1□□□□□ -0.31
YNL247WP53852 SUF2tP(AGG)C 72 nt13.08□□□□□ -0.32
YNL247WP53852 SUF10tP(AGG)N 72 nt13.08□□□□□ -0.32
YNL247WP53852 NPL3YDR432W 1245 nt13.06□□□□□ -0.32
YNL247WP53852 YOL037CYOL037C 354 nt13.05□□□□□ -0.32
YNL247WP53852 YOR139CYOR139C 393 nt13.03□□□□□ -0.32
YNL247WP53852 PAC11YDR488C 1602 nt12.99□□□□□ -0.33
YNL247WP53852 FPS1YLL043W 2010 nt12.96□□□□□ -0.33
YNL247WP53852 BDF1YLR399C 2061 nt12.96□□□□□ -0.33
YNL247WP53852 NVJ2YPR091C 2313 nt12.96□□□□□ -0.34
YNL247WP53852 RPP2AYOL039W 321 nt12.92□□□□□ -0.34
YNL247WP53852 SIS1YNL007C 1059 nt12.89□□□□□ -0.35
YNL247WP53852 DCW1YKL046C 1350 nt12.86□□□□□ -0.35
Retrieved 100 of 7,029 protein–RNA pairs in 13.3 ms