RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
XRN1	YGL173C	DAL2	P25335	343 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	KAR4	P25583	335 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	DPH5	P32469	300 aa	Predicted RBP	3.14	□□□□□ -1.91
XRN1	YGL173C	MRX3	P38172	270 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	SBE22	P38814	852 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	SED5	Q01590	340 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	SWF1	Q04629	336 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	YKL033W-A	Q86ZR7	236 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	GAL10	P04397	699 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	GPA1	P08539	472 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	ALG1	P16661	449 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	CTR86	P25355	563 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	PEP3	P27801	918 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	PRP21	P32524	280 aa	Predicted RBP	3.14	□□□□□ -1.91
XRN1	YGL173C	PHO11	P35842	467 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	MAL33	P38157	468 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	BNA4	P38169	460 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	PHO12	P38693	467 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	RTT107	P38850	1070 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	ZAP1	P47043	880 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	CTR1	P49573	406 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	CPR8	P53728	308 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	RLI1	Q03195	608 aa	Known RBP	3.14	□□□□□ -1.91
XRN1	YGL173C	RMD5	Q12508	421 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	ARP6	Q12509	438 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	ELO2	P25358	347 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	IMG1	P25626	169 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	PSO2	P30620	661 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	GCG1	P32656	232 aa	Known RBP	3.14	□□□□□ -1.91
XRN1	YGL173C	VPS21	P36017	210 aa	Known RBP	3.14	□□□□□ -1.91
XRN1	YGL173C	STB5	P38699	743 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	MPS3	P47069	682 aa		3.14	□□□□□ -1.91
XRN1	YGL173C	YJR141W	P47172	347 aa	Predicted RBP	3.14	□□□□□ -1.91
XRN1	YGL173C	CUE3	P53137	624 aa	Known RBP	3.14	□□□□□ -1.91
XRN1	YGL173C	YMR226C	Q05016	267 aa	Known RBP	3.14	□□□□□ -1.91
XRN1	YGL173C	RPP0	P05317	312 aa	Known RBP	3.13	□□□□□ -1.91
XRN1	YGL173C	GAL3	P13045	520 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	ZUO1	P32527	433 aa	Known RBP	3.13	□□□□□ -1.91
XRN1	YGL173C	PDR3	P33200	976 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	SWC5	P38326	303 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	SHO1	P40073	367 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	YFL066C	P43538	392 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	IMD4	P50094	524 aa	Known RBP	3.13	□□□□□ -1.91
XRN1	YGL173C	YNL247W	P53852	767 aa	Known RBP	3.13	□□□□□ -1.91
XRN1	YGL173C	RHO4	Q00246	291 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	NUP116	Q02630	1113 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	YDR239C	Q03780	787 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	YLR297W	Q05899	129 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	RKI1	Q12189	258 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	TRM13	Q12383	476 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	RAD51	P25454	400 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	ERV1	P27882	189 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	ACP1	P32463	125 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	SPC34	P36131	295 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	ARA1	P38115	344 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	DID2	P69771	204 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	MMT1	Q03218	510 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	RSN1	Q03516	953 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	PIG1	Q06216	648 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	AIM45	Q12480	344 aa	Known RBP	3.13	□□□□□ -1.91
XRN1	YGL173C	RRT12	P25381	491 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	ERG1	P32476	496 aa	Known RBP	3.13	□□□□□ -1.91
XRN1	YGL173C	YHR097C	P38809	366 aa	Known RBP	3.13	□□□□□ -1.91
XRN1	YGL173C	EFM4	P40516	257 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	AIM22	P47051	409 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	TRF5	P48561	642 aa	Known RBP	3.13	□□□□□ -1.91
XRN1	YGL173C	YGR117C	P53270	476 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	LOT6	Q07923	191 aa		3.13	□□□□□ -1.91
XRN1	YGL173C	PAB1	P04147	577 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
XRN1	YGL173C	RVS161	P25343	265 aa	Known RBP	3.12	□□□□□ -1.91
XRN1	YGL173C	PCA1	P38360	1216 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	RRP4	P38792	359 aa	Known RBP	3.12	□□□□□ -1.91
XRN1	YGL173C	RTR1	P40084	226 aa	Predicted RBP	3.12	□□□□□ -1.91
XRN1	YGL173C	RIM8	P53179	542 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	YMR027W	Q04371	470 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	SPO77	Q06134	477 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	PDR8	Q06149	701 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	GMC2	Q06201	188 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	SUT2	Q12286	268 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	SSK22	P25390	1331 aa	Predicted RBP	3.12	□□□□□ -1.91
XRN1	YGL173C	MAS1	P10507	462 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	CLN3	P13365	580 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	MET16	P18408	261 aa	Predicted RBP	3.12	□□□□□ -1.91
XRN1	YGL173C	PUB1	P32588	453 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
XRN1	YGL173C	APL3	P38065	1025 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	BDH2	P39713	417 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	SNU56	Q03782	492 aa	Known RBP	3.12	□□□□□ -1.91
XRN1	YGL173C	HSP31	Q04432	237 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	SMA2	Q04658	369 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	MFG1	Q07684	458 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	YDL176W	Q12027	708 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	PUF2	Q12221	1075 aa	Known RBP RIP-Chip data	3.12	□□□□□ -1.91	not detected
XRN1	YGL173C	YDR061W	Q12298	539 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	COX3	P00420	269 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	GAL80	P04387	435 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	MET3	P08536	511 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	PMR1	P13586	950 aa		3.12	□□□□□ -1.91
XRN1	YGL173C	RPS7A	P26786	190 aa	Known RBP	3.12	□□□□□ -1.91
XRN1	YGL173C	PTK1	P36002	662 aa	Predicted RBP	3.12	□□□□□ -1.91
XRN1	YGL173C	PCF11	P39081	626 aa	Predicted RBP	3.12	□□□□□ -1.91

Retrieved 100 of 5,963 RNA–protein pairs in 29 ms