Protein–RNA interactions for Protein: P38850

RTT107, Regulator of Ty1 transposition protein 107, yeastyeast

Predictions only

Length 1,070 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RTT107P38850 NSR1YGR159C 1245 nt22.08■■□□□ 1.13
RTT107P38850 YML009W-BYML009W-B 477 nt21.93■■□□□ 1.1
RTT107P38850 NOP1YDL014W 984 nt21.09■□□□□ 0.97
RTT107P38850 MDJ1YFL016C 1536 nt20.02■□□□□ 0.79
RTT107P38850 YKL036CYKL036C 393 nt19.21■□□□□ 0.67
RTT107P38850 SRX1YKL086W 384 nt18.51■□□□□ 0.55
RTT107P38850 Q0297Q0297 156 nt18.45■□□□□ 0.54
RTT107P38850 YJL027CYJL027C 417 nt18.34■□□□□ 0.53
RTT107P38850 DBP2YNL112W 1641 nt17.65■□□□□ 0.42
RTT107P38850 YCR051WYCR051W 669 nt17.51■□□□□ 0.39
RTT107P38850 SCS3YGL126W 1143 nt17.38■□□□□ 0.37
RTT107P38850 YBR190WYBR190W 312 nt17.08■□□□□ 0.32
RTT107P38850 TRN1tP(UGG)A 72 nt16.99■□□□□ 0.31
RTT107P38850 SUF9tP(UGG)F 72 nt16.99■□□□□ 0.31
RTT107P38850 SUF8tP(UGG)H 72 nt16.99■□□□□ 0.31
RTT107P38850 tP(UGG)LtP(UGG)L 72 nt16.99■□□□□ 0.31
RTT107P38850 SUF7tP(UGG)M 72 nt16.99■□□□□ 0.31
RTT107P38850 tP(UGG)N1tP(UGG)N1 72 nt16.99■□□□□ 0.31
RTT107P38850 tP(UGG)N2tP(UGG)N2 72 nt16.99■□□□□ 0.31
RTT107P38850 tP(UGG)O1tP(UGG)O1 72 nt16.99■□□□□ 0.31
RTT107P38850 SUF11tP(UGG)O2 72 nt16.99■□□□□ 0.31
RTT107P38850 CCC1YLR220W 969 nt16.77■□□□□ 0.28
RTT107P38850 YOL085CYOL085C 342 nt16.71■□□□□ 0.27
RTT107P38850 RTC3YHR087W 336 nt16.64■□□□□ 0.25
RTT107P38850 SSA3YBL075C 1950 nt16.57■□□□□ 0.24
RTT107P38850 RPP1BYDL130W 321 nt16.54■□□□□ 0.24
RTT107P38850 PKP1YIL042C 1185 nt16.51■□□□□ 0.23
RTT107P38850 SCJ1YMR214W 1134 nt16.35■□□□□ 0.21
RTT107P38850 RVS167YDR388W 1449 nt16.28■□□□□ 0.2
RTT107P38850 tP(UGG)O3tP(UGG)O3 72 nt15.94■□□□□ 0.14
RTT107P38850 PET122YER153C 765 nt15.9■□□□□ 0.14
RTT107P38850 PUT4YOR348C 1884 nt15.88■□□□□ 0.13
RTT107P38850 SHR5YOL110W 714 nt15.72■□□□□ 0.11
RTT107P38850 URN1YPR152C 1398 nt15.51■□□□□ 0.07
RTT107P38850 SCR1SCR1 522 nt15.5■□□□□ 0.07
RTT107P38850 ARE1YCR048W 1833 nt15.5■□□□□ 0.07
RTT107P38850 DEP1YAL013W 1218 nt15.43■□□□□ 0.06
RTT107P38850 ATS1YAL020C 1002 nt15.43■□□□□ 0.06
RTT107P38850 RRN5YLR141W 1092 nt15.39■□□□□ 0.05
RTT107P38850 YDJ1YNL064C 1230 nt15.39■□□□□ 0.05
RTT107P38850 SAH1YER043C 1350 nt15.38■□□□□ 0.05
RTT107P38850 OPI9YLR338W 858 nt15.36■□□□□ 0.05
RTT107P38850 POA1YBR022W 534 nt15.31■□□□□ 0.04
RTT107P38850 YHR049C-AYHR049C-A 297 nt15.23■□□□□ 0.03
RTT107P38850 GAR1YHR089C 618 nt15.12■□□□□ 0.01
RTT107P38850 YER088W-BYER088W-B 147 nt15.09■□□□□ 0.01
RTT107P38850 YNL208WYNL208W 600 nt15.09■□□□□ 0.01
RTT107P38850 RPN10YHR200W 807 nt15.08■□□□□ 0
RTT107P38850 BSC6YOL137W 1494 nt15.05■□□□□ -0
RTT107P38850 RSB1YOR049C 1065 nt14.91□□□□□ -0.02
RTT107P38850 PUN1YLR414C 792 nt14.85□□□□□ -0.03
RTT107P38850 BUD23YCR047C 828 nt14.8□□□□□ -0.04
RTT107P38850 PTC2YER089C 1395 nt14.78□□□□□ -0.04
RTT107P38850 SPT5YML010W 3192 nt14.77□□□□□ -0.05
RTT107P38850 YJR018WYJR018W 363 nt14.75□□□□□ -0.05
RTT107P38850 TIR1YER011W 765 nt14.63□□□□□ -0.07
RTT107P38850 YJR120WYJR120W 351 nt14.63□□□□□ -0.07
RTT107P38850 NAB2YGL122C 1578 nt14.61□□□□□ -0.07
RTT107P38850 SSA4YER103W 1929 nt14.6□□□□□ -0.07
RTT107P38850 SSA1YAL005C 1929 nt14.6□□□□□ -0.07
RTT107P38850 FIS1YIL065C 468 nt14.47□□□□□ -0.09
RTT107P38850 SRB2YHR041C 633 nt14.42□□□□□ -0.1
RTT107P38850 PST2YDR032C 597 nt14.38□□□□□ -0.11
RTT107P38850 DAL1YIR027C 1383 nt14.36□□□□□ -0.11
RTT107P38850 FPR4YLR449W 1179 nt14.29□□□□□ -0.12
RTT107P38850 RPP2BYDR382W 333 nt14.27□□□□□ -0.13
RTT107P38850 PHO4YFR034C 939 nt14.26□□□□□ -0.13
RTT107P38850 INM2YDR287W 879 nt14.23□□□□□ -0.13
RTT107P38850 BDF1YLR399C 2061 nt14.16□□□□□ -0.14
RTT107P38850 MEP2YNL142W 1500 nt14.15□□□□□ -0.14
RTT107P38850 YPS1YLR120C 1710 nt14.12□□□□□ -0.15
RTT107P38850 YBL100CYBL100C 315 nt14.08□□□□□ -0.16
RTT107P38850 BDH2YAL061W 1254 nt14.02□□□□□ -0.17
RTT107P38850 DCW1YKL046C 1350 nt13.99□□□□□ -0.17
RTT107P38850 YDR095CYDR095C 411 nt13.98□□□□□ -0.17
RTT107P38850 WWM1YFL010C 636 nt13.97□□□□□ -0.17
RTT107P38850 TAT1YBR069C 1860 nt13.94□□□□□ -0.18
RTT107P38850 FUN26YAL022C 1554 nt13.92□□□□□ -0.18
RTT107P38850 YHR165W-AYHR165W-A 312 nt13.92□□□□□ -0.18
RTT107P38850 SHU1YHL006C 453 nt13.89□□□□□ -0.19
RTT107P38850 YAL037C-BYAL037C-B 975 nt13.79□□□□□ -0.2
RTT107P38850 PTP1YDL230W 1008 nt13.78□□□□□ -0.2
RTT107P38850 TRM9YML014W 840 nt13.77□□□□□ -0.21
RTT107P38850 LSM3YLR438C-A 270 nt13.75□□□□□ -0.21
RTT107P38850 PAC11YDR488C 1602 nt13.75□□□□□ -0.21
RTT107P38850 EMI2YDR516C 1503 nt13.74□□□□□ -0.21
RTT107P38850 CAC2YML102W 1407 nt13.73□□□□□ -0.21
RTT107P38850 HOM6YJR139C 1080 nt13.72□□□□□ -0.21
RTT107P38850 CCT6YDR188W 1641 nt13.72□□□□□ -0.21
RTT107P38850 ALF1YNL148C 765 nt13.7□□□□□ -0.22
RTT107P38850 YFL021C-AYFL021C-A 855 nt13.68□□□□□ -0.22
RTT107P38850 RPP2AYOL039W 321 nt13.68□□□□□ -0.22
RTT107P38850 YGR021WYGR021W 873 nt13.67□□□□□ -0.22
RTT107P38850 YBR220CYBR220C 1683 nt13.63□□□□□ -0.23
RTT107P38850 MNP1YGL068W 585 nt13.63□□□□□ -0.23
RTT107P38850 SIS1YNL007C 1059 nt13.62□□□□□ -0.23
RTT107P38850 YDL221WYDL221W 552 nt13.61□□□□□ -0.23
RTT107P38850 YKL097CYKL097C 411 nt13.55□□□□□ -0.24
RTT107P38850 SUF2tP(AGG)C 72 nt13.52□□□□□ -0.25
RTT107P38850 SUF10tP(AGG)N 72 nt13.52□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 30.8 ms