Protein–RNA interactions for Protein: Q02630

NUP116, Nucleoporin NUP116/NSP116, yeastyeast

Predictions only

Length 1,113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP116Q02630 NSR1YGR159C 1245 nt18.23■□□□□ 0.51
NUP116Q02630 YML009W-BYML009W-B 477 nt18.14■□□□□ 0.49
NUP116Q02630 NOP1YDL014W 984 nt17.63■□□□□ 0.41
NUP116Q02630 MDJ1YFL016C 1536 nt16.27■□□□□ 0.2
NUP116Q02630 YKL036CYKL036C 393 nt16.07■□□□□ 0.16
NUP116Q02630 SRX1YKL086W 384 nt15.38■□□□□ 0.05
NUP116Q02630 Q0297Q0297 156 nt15.35■□□□□ 0.05
NUP116Q02630 YJL027CYJL027C 417 nt15.06■□□□□ 0
NUP116Q02630 YCR051WYCR051W 669 nt14.55□□□□□ -0.08
NUP116Q02630 SCS3YGL126W 1143 nt14.5□□□□□ -0.09
NUP116Q02630 DBP2YNL112W 1641 nt14.33□□□□□ -0.12
NUP116Q02630 YBR190WYBR190W 312 nt14.01□□□□□ -0.17
NUP116Q02630 TRN1tP(UGG)A 72 nt13.99□□□□□ -0.17
NUP116Q02630 SUF9tP(UGG)F 72 nt13.99□□□□□ -0.17
NUP116Q02630 SUF8tP(UGG)H 72 nt13.99□□□□□ -0.17
NUP116Q02630 tP(UGG)LtP(UGG)L 72 nt13.99□□□□□ -0.17
NUP116Q02630 SUF7tP(UGG)M 72 nt13.99□□□□□ -0.17
NUP116Q02630 tP(UGG)N1tP(UGG)N1 72 nt13.99□□□□□ -0.17
NUP116Q02630 tP(UGG)N2tP(UGG)N2 72 nt13.99□□□□□ -0.17
NUP116Q02630 tP(UGG)O1tP(UGG)O1 72 nt13.99□□□□□ -0.17
NUP116Q02630 SUF11tP(UGG)O2 72 nt13.99□□□□□ -0.17
NUP116Q02630 YOL085CYOL085C 342 nt13.9□□□□□ -0.18
NUP116Q02630 CCC1YLR220W 969 nt13.81□□□□□ -0.2
NUP116Q02630 SSA3YBL075C 1950 nt13.8□□□□□ -0.2
NUP116Q02630 RPP1BYDL130W 321 nt13.77□□□□□ -0.21
NUP116Q02630 RTC3YHR087W 336 nt13.71□□□□□ -0.21
NUP116Q02630 PKP1YIL042C 1185 nt13.67□□□□□ -0.22
NUP116Q02630 SCJ1YMR214W 1134 nt13.64□□□□□ -0.23
NUP116Q02630 RVS167YDR388W 1449 nt13.52□□□□□ -0.25
NUP116Q02630 tP(UGG)O3tP(UGG)O3 72 nt13.17□□□□□ -0.3
NUP116Q02630 PUT4YOR348C 1884 nt13.16□□□□□ -0.3
NUP116Q02630 PET122YER153C 765 nt13.14□□□□□ -0.31
NUP116Q02630 ATS1YAL020C 1002 nt13.06□□□□□ -0.32
NUP116Q02630 SCR1SCR1 522 nt13.01□□□□□ -0.33
NUP116Q02630 SHR5YOL110W 714 nt12.99□□□□□ -0.33
NUP116Q02630 YDJ1YNL064C 1230 nt12.78□□□□□ -0.36
NUP116Q02630 RRN5YLR141W 1092 nt12.74□□□□□ -0.37
NUP116Q02630 ARE1YCR048W 1833 nt12.73□□□□□ -0.37
NUP116Q02630 POA1YBR022W 534 nt12.72□□□□□ -0.37
NUP116Q02630 URN1YPR152C 1398 nt12.7□□□□□ -0.38
NUP116Q02630 YHR049C-AYHR049C-A 297 nt12.63□□□□□ -0.39
NUP116Q02630 DEP1YAL013W 1218 nt12.6□□□□□ -0.39
NUP116Q02630 BSC6YOL137W 1494 nt12.58□□□□□ -0.4
NUP116Q02630 SAH1YER043C 1350 nt12.57□□□□□ -0.4
NUP116Q02630 OPI9YLR338W 858 nt12.57□□□□□ -0.4
NUP116Q02630 RPN10YHR200W 807 nt12.54□□□□□ -0.4
NUP116Q02630 YER088W-BYER088W-B 147 nt12.49□□□□□ -0.41
NUP116Q02630 GAR1YHR089C 618 nt12.47□□□□□ -0.41
NUP116Q02630 YNL208WYNL208W 600 nt12.46□□□□□ -0.41
NUP116Q02630 RSB1YOR049C 1065 nt12.44□□□□□ -0.42
NUP116Q02630 SPT5YML010W 3192 nt12.33□□□□□ -0.44
NUP116Q02630 BUD23YCR047C 828 nt12.3□□□□□ -0.44
NUP116Q02630 SSA4YER103W 1929 nt12.29□□□□□ -0.44
NUP116Q02630 PUN1YLR414C 792 nt12.23□□□□□ -0.45
NUP116Q02630 YJR018WYJR018W 363 nt12.12□□□□□ -0.47
NUP116Q02630 PTC2YER089C 1395 nt12.1□□□□□ -0.47
NUP116Q02630 TIR1YER011W 765 nt12.08□□□□□ -0.48
NUP116Q02630 NAB2YGL122C 1578 nt12.04□□□□□ -0.48
NUP116Q02630 PST2YDR032C 597 nt12□□□□□ -0.49
NUP116Q02630 SSA1YAL005C 1929 nt11.94□□□□□ -0.5
NUP116Q02630 RPP2BYDR382W 333 nt11.87□□□□□ -0.51
NUP116Q02630 MEP2YNL142W 1500 nt11.86□□□□□ -0.51
NUP116Q02630 YKL097CYKL097C 411 nt11.86□□□□□ -0.51
NUP116Q02630 YJR120WYJR120W 351 nt11.84□□□□□ -0.51
NUP116Q02630 BDF1YLR399C 2061 nt11.83□□□□□ -0.52
NUP116Q02630 FIS1YIL065C 468 nt11.79□□□□□ -0.52
NUP116Q02630 DAL1YIR027C 1383 nt11.77□□□□□ -0.53
NUP116Q02630 FPR4YLR449W 1179 nt11.76□□□□□ -0.53
NUP116Q02630 INM2YDR287W 879 nt11.74□□□□□ -0.53
NUP116Q02630 TAT1YBR069C 1860 nt11.68□□□□□ -0.54
NUP116Q02630 PHO4YFR034C 939 nt11.66□□□□□ -0.54
NUP116Q02630 SRB2YHR041C 633 nt11.64□□□□□ -0.55
NUP116Q02630 DCW1YKL046C 1350 nt11.64□□□□□ -0.55
NUP116Q02630 YPS1YLR120C 1710 nt11.62□□□□□ -0.55
NUP116Q02630 YHR165W-AYHR165W-A 312 nt11.59□□□□□ -0.55
NUP116Q02630 BDH2YAL061W 1254 nt11.58□□□□□ -0.56
NUP116Q02630 YBL100CYBL100C 315 nt11.57□□□□□ -0.56
NUP116Q02630 SHU1YHL006C 453 nt11.53□□□□□ -0.56
NUP116Q02630 YMR090WYMR090W 684 nt11.53□□□□□ -0.56
NUP116Q02630 EMI2YDR516C 1503 nt11.5□□□□□ -0.57
NUP116Q02630 WWM1YFL010C 636 nt11.49□□□□□ -0.57
NUP116Q02630 YBR220CYBR220C 1683 nt11.46□□□□□ -0.57
NUP116Q02630 YDR095CYDR095C 411 nt11.46□□□□□ -0.57
NUP116Q02630 YGR021WYGR021W 873 nt11.45□□□□□ -0.58
NUP116Q02630 PAC11YDR488C 1602 nt11.43□□□□□ -0.58
NUP116Q02630 FUN26YAL022C 1554 nt11.42□□□□□ -0.58
NUP116Q02630 LSM3YLR438C-A 270 nt11.41□□□□□ -0.58
NUP116Q02630 TRM9YML014W 840 nt11.39□□□□□ -0.59
NUP116Q02630 YAL037C-BYAL037C-B 975 nt11.37□□□□□ -0.59
NUP116Q02630 YDL221WYDL221W 552 nt11.36□□□□□ -0.59
NUP116Q02630 YFL021C-AYFL021C-A 855 nt11.36□□□□□ -0.59
NUP116Q02630 HOM6YJR139C 1080 nt11.35□□□□□ -0.59
NUP116Q02630 SDH1YKL148C 1923 nt11.33□□□□□ -0.6
NUP116Q02630 ALF1YNL148C 765 nt11.32□□□□□ -0.6
NUP116Q02630 CCT6YDR188W 1641 nt11.28□□□□□ -0.6
NUP116Q02630 RPP2AYOL039W 321 nt11.26□□□□□ -0.61
NUP116Q02630 SUF2tP(AGG)C 72 nt11.24□□□□□ -0.61
NUP116Q02630 SUF10tP(AGG)N 72 nt11.24□□□□□ -0.61
NUP116Q02630 CAC2YML102W 1407 nt11.24□□□□□ -0.61
NUP116Q02630 MNP1YGL068W 585 nt11.23□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 13.1 ms