Protein–RNA interactions for Protein: P39081

PCF11, Protein PCF11, yeastyeast

Predicted RBP Predictions only

Length 626 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PCF11P39081 YML009W-BYML009W-B 477 nt20.33■□□□□ 0.85
PCF11P39081 NOP1YDL014W 984 nt20.03■□□□□ 0.8
PCF11P39081 NSR1YGR159C 1245 nt19.79■□□□□ 0.76
PCF11P39081 YKL036CYKL036C 393 nt18.9■□□□□ 0.62
PCF11P39081 YJL027CYJL027C 417 nt17.73■□□□□ 0.43
PCF11P39081 Q0297Q0297 156 nt17.64■□□□□ 0.41
PCF11P39081 SRX1YKL086W 384 nt17.45■□□□□ 0.38
PCF11P39081 SCS3YGL126W 1143 nt17.4■□□□□ 0.38
PCF11P39081 MDJ1YFL016C 1536 nt17.05■□□□□ 0.32
PCF11P39081 YCR051WYCR051W 669 nt16.61■□□□□ 0.25
PCF11P39081 YOL085CYOL085C 342 nt16.32■□□□□ 0.2
PCF11P39081 SCJ1YMR214W 1134 nt16.1■□□□□ 0.17
PCF11P39081 PKP1YIL042C 1185 nt15.99■□□□□ 0.15
PCF11P39081 RPP1BYDL130W 321 nt15.83■□□□□ 0.12
PCF11P39081 ATS1YAL020C 1002 nt15.71■□□□□ 0.11
PCF11P39081 TRN1tP(UGG)A 72 nt15.46■□□□□ 0.07
PCF11P39081 SUF9tP(UGG)F 72 nt15.46■□□□□ 0.07
PCF11P39081 SUF8tP(UGG)H 72 nt15.46■□□□□ 0.07
PCF11P39081 tP(UGG)LtP(UGG)L 72 nt15.46■□□□□ 0.07
PCF11P39081 SUF7tP(UGG)M 72 nt15.46■□□□□ 0.07
PCF11P39081 tP(UGG)N1tP(UGG)N1 72 nt15.46■□□□□ 0.07
PCF11P39081 tP(UGG)N2tP(UGG)N2 72 nt15.46■□□□□ 0.07
PCF11P39081 tP(UGG)O1tP(UGG)O1 72 nt15.46■□□□□ 0.07
PCF11P39081 SUF11tP(UGG)O2 72 nt15.46■□□□□ 0.07
PCF11P39081 CCC1YLR220W 969 nt15.33■□□□□ 0.04
PCF11P39081 DBP2YNL112W 1641 nt15.24■□□□□ 0.03
PCF11P39081 SCR1SCR1 522 nt15.1■□□□□ 0.01
PCF11P39081 SSA3YBL075C 1950 nt15.07■□□□□ 0
PCF11P39081 PET122YER153C 765 nt15.03■□□□□ -0
PCF11P39081 tP(UGG)O3tP(UGG)O3 72 nt14.8□□□□□ -0.04
PCF11P39081 RRN5YLR141W 1092 nt14.67□□□□□ -0.06
PCF11P39081 RTC3YHR087W 336 nt14.61□□□□□ -0.07
PCF11P39081 YBR190WYBR190W 312 nt14.6□□□□□ -0.07
PCF11P39081 RVS167YDR388W 1449 nt14.58□□□□□ -0.07
PCF11P39081 RSB1YOR049C 1065 nt14.54□□□□□ -0.08
PCF11P39081 PST2YDR032C 597 nt14.45□□□□□ -0.1
PCF11P39081 YER088W-BYER088W-B 147 nt14.37□□□□□ -0.11
PCF11P39081 YDJ1YNL064C 1230 nt14.34□□□□□ -0.11
PCF11P39081 YKL097CYKL097C 411 nt14.19□□□□□ -0.14
PCF11P39081 SHR5YOL110W 714 nt14.15□□□□□ -0.14
PCF11P39081 GAR1YHR089C 618 nt13.92□□□□□ -0.18
PCF11P39081 PUT4YOR348C 1884 nt13.8□□□□□ -0.2
PCF11P39081 SHU1YHL006C 453 nt13.74□□□□□ -0.21
PCF11P39081 DEP1YAL013W 1218 nt13.55□□□□□ -0.24
PCF11P39081 YOR139CYOR139C 393 nt13.46□□□□□ -0.25
PCF11P39081 TIR1YER011W 765 nt13.44□□□□□ -0.26
PCF11P39081 YNL208WYNL208W 600 nt13.44□□□□□ -0.26
PCF11P39081 URN1YPR152C 1398 nt13.44□□□□□ -0.26
PCF11P39081 RPN10YHR200W 807 nt13.43□□□□□ -0.26
PCF11P39081 YAL037C-BYAL037C-B 975 nt13.37□□□□□ -0.27
PCF11P39081 NPL3YDR432W 1245 nt13.33□□□□□ -0.28
PCF11P39081 ARE1YCR048W 1833 nt13.33□□□□□ -0.28
PCF11P39081 POA1YBR022W 534 nt13.32□□□□□ -0.28
PCF11P39081 SPT5YML010W 3192 nt13.26□□□□□ -0.29
PCF11P39081 SSA4YER103W 1929 nt13.21□□□□□ -0.3
PCF11P39081 YHR049C-AYHR049C-A 297 nt13.19□□□□□ -0.3
PCF11P39081 SAH1YER043C 1350 nt13.17□□□□□ -0.3
PCF11P39081 BSC6YOL137W 1494 nt13.16□□□□□ -0.3
PCF11P39081 OPI9YLR338W 858 nt13.14□□□□□ -0.31
PCF11P39081 SSA1YAL005C 1929 nt13.11□□□□□ -0.31
PCF11P39081 YGR021WYGR021W 873 nt13.05□□□□□ -0.32
PCF11P39081 YOL037CYOL037C 354 nt13.01□□□□□ -0.33
PCF11P39081 HOM6YJR139C 1080 nt12.96□□□□□ -0.33
PCF11P39081 MNP1YGL068W 585 nt12.95□□□□□ -0.34
PCF11P39081 tM(CAU)CtM(CAU)C 72 nt12.91□□□□□ -0.34
PCF11P39081 IMT4tM(CAU)E 72 nt12.91□□□□□ -0.34
PCF11P39081 IMT3tM(CAU)J3 72 nt12.91□□□□□ -0.34
PCF11P39081 IMT1tM(CAU)O1 72 nt12.91□□□□□ -0.34
PCF11P39081 IMT2tM(CAU)P 72 nt12.91□□□□□ -0.34
PCF11P39081 SRB2YHR041C 633 nt12.91□□□□□ -0.34
PCF11P39081 WWM1YFL010C 636 nt12.9□□□□□ -0.34
PCF11P39081 YJR018WYJR018W 363 nt12.86□□□□□ -0.35
PCF11P39081 BUD23YCR047C 828 nt12.85□□□□□ -0.35
PCF11P39081 PUN1YLR414C 792 nt12.81□□□□□ -0.36
PCF11P39081 BDF1YLR399C 2061 nt12.81□□□□□ -0.36
PCF11P39081 RPP2BYDR382W 333 nt12.8□□□□□ -0.36
PCF11P39081 RKM5YLR137W 1104 nt12.78□□□□□ -0.36
PCF11P39081 YFL021C-AYFL021C-A 855 nt12.74□□□□□ -0.37
PCF11P39081 PUS2YGL063W 1113 nt12.68□□□□□ -0.38
PCF11P39081 YJR120WYJR120W 351 nt12.66□□□□□ -0.38
PCF11P39081 PTC2YER089C 1395 nt12.65□□□□□ -0.38
PCF11P39081 TAT1YBR069C 1860 nt12.63□□□□□ -0.39
PCF11P39081 MOT3YMR070W 1473 nt12.62□□□□□ -0.39
PCF11P39081 YLR281CYLR281C 468 nt12.62□□□□□ -0.39
PCF11P39081 BDH2YAL061W 1254 nt12.57□□□□□ -0.4
PCF11P39081 PAC11YDR488C 1602 nt12.55□□□□□ -0.4
PCF11P39081 NAB2YGL122C 1578 nt12.55□□□□□ -0.4
PCF11P39081 LSM3YLR438C-A 270 nt12.52□□□□□ -0.41
PCF11P39081 WHI5YOR083W 888 nt12.52□□□□□ -0.41
PCF11P39081 MEP2YNL142W 1500 nt12.47□□□□□ -0.41
PCF11P39081 INM2YDR287W 879 nt12.37□□□□□ -0.43
PCF11P39081 FMP45YDL222C 930 nt12.36□□□□□ -0.43
PCF11P39081 MRPL8YJL063C 717 nt12.36□□□□□ -0.43
PCF11P39081 FIS1YIL065C 468 nt12.32□□□□□ -0.44
PCF11P39081 IMP2'YIL154C 1041 nt12.32□□□□□ -0.44
PCF11P39081 DSK2YMR276W 1122 nt12.32□□□□□ -0.44
PCF11P39081 YBL100CYBL100C 315 nt12.3□□□□□ -0.44
PCF11P39081 YCH1YGR203W 447 nt12.28□□□□□ -0.44
PCF11P39081 FPR4YLR449W 1179 nt12.28□□□□□ -0.44
PCF11P39081 TRM9YML014W 840 nt12.28□□□□□ -0.44
Retrieved 100 of 7,029 protein–RNA pairs in 14.6 ms