Protein–RNA interactions for Protein: P38792

RRP4, Exosome complex component RRP4, yeastyeast

Known RBP Predictions only

Length 359 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RRP4P38792 YML009W-BYML009W-B 477 nt18.56■□□□□ 0.56
RRP4P38792 NSR1YGR159C 1245 nt18.47■□□□□ 0.55
RRP4P38792 NOP1YDL014W 984 nt17.93■□□□□ 0.46
RRP4P38792 MDJ1YFL016C 1536 nt16.59■□□□□ 0.25
RRP4P38792 YKL036CYKL036C 393 nt16.46■□□□□ 0.23
RRP4P38792 SRX1YKL086W 384 nt15.67■□□□□ 0.1
RRP4P38792 Q0297Q0297 156 nt15.65■□□□□ 0.1
RRP4P38792 YJL027CYJL027C 417 nt15.37■□□□□ 0.05
RRP4P38792 SCS3YGL126W 1143 nt14.93□□□□□ -0.02
RRP4P38792 YCR051WYCR051W 669 nt14.92□□□□□ -0.02
RRP4P38792 DBP2YNL112W 1641 nt14.59□□□□□ -0.07
RRP4P38792 YOL085CYOL085C 342 nt14.27□□□□□ -0.13
RRP4P38792 TRN1tP(UGG)A 72 nt14.25□□□□□ -0.13
RRP4P38792 SUF9tP(UGG)F 72 nt14.25□□□□□ -0.13
RRP4P38792 SUF8tP(UGG)H 72 nt14.25□□□□□ -0.13
RRP4P38792 tP(UGG)LtP(UGG)L 72 nt14.25□□□□□ -0.13
RRP4P38792 SUF7tP(UGG)M 72 nt14.25□□□□□ -0.13
RRP4P38792 tP(UGG)N1tP(UGG)N1 72 nt14.25□□□□□ -0.13
RRP4P38792 tP(UGG)N2tP(UGG)N2 72 nt14.25□□□□□ -0.13
RRP4P38792 tP(UGG)O1tP(UGG)O1 72 nt14.25□□□□□ -0.13
RRP4P38792 SUF11tP(UGG)O2 72 nt14.25□□□□□ -0.13
RRP4P38792 CCC1YLR220W 969 nt14.17□□□□□ -0.14
RRP4P38792 PKP1YIL042C 1185 nt14.13□□□□□ -0.15
RRP4P38792 YBR190WYBR190W 312 nt14.1□□□□□ -0.15
RRP4P38792 RPP1BYDL130W 321 nt14.06□□□□□ -0.16
RRP4P38792 SSA3YBL075C 1950 nt14.03□□□□□ -0.16
RRP4P38792 RTC3YHR087W 336 nt13.85□□□□□ -0.19
RRP4P38792 RVS167YDR388W 1449 nt13.67□□□□□ -0.22
RRP4P38792 SCJ1YMR214W 1134 nt13.62□□□□□ -0.23
RRP4P38792 PET122YER153C 765 nt13.48□□□□□ -0.25
RRP4P38792 tP(UGG)O3tP(UGG)O3 72 nt13.46□□□□□ -0.25
RRP4P38792 ATS1YAL020C 1002 nt13.31□□□□□ -0.28
RRP4P38792 SCR1SCR1 522 nt13.28□□□□□ -0.28
RRP4P38792 SHR5YOL110W 714 nt13.17□□□□□ -0.3
RRP4P38792 RRN5YLR141W 1092 nt13.09□□□□□ -0.31
RRP4P38792 PUT4YOR348C 1884 nt13.02□□□□□ -0.32
RRP4P38792 YDJ1YNL064C 1230 nt12.98□□□□□ -0.33
RRP4P38792 DEP1YAL013W 1218 nt12.92□□□□□ -0.34
RRP4P38792 URN1YPR152C 1398 nt12.91□□□□□ -0.34
RRP4P38792 YER088W-BYER088W-B 147 nt12.81□□□□□ -0.36
RRP4P38792 RSB1YOR049C 1065 nt12.79□□□□□ -0.36
RRP4P38792 GAR1YHR089C 618 nt12.78□□□□□ -0.36
RRP4P38792 OPI9YLR338W 858 nt12.71□□□□□ -0.37
RRP4P38792 SAH1YER043C 1350 nt12.7□□□□□ -0.38
RRP4P38792 ARE1YCR048W 1833 nt12.65□□□□□ -0.39
RRP4P38792 RPN10YHR200W 807 nt12.64□□□□□ -0.39
RRP4P38792 YNL208WYNL208W 600 nt12.63□□□□□ -0.39
RRP4P38792 POA1YBR022W 534 nt12.55□□□□□ -0.4
RRP4P38792 YHR049C-AYHR049C-A 297 nt12.51□□□□□ -0.41
RRP4P38792 SPT5YML010W 3192 nt12.46□□□□□ -0.41
RRP4P38792 BSC6YOL137W 1494 nt12.42□□□□□ -0.42
RRP4P38792 SSA4YER103W 1929 nt12.35□□□□□ -0.43
RRP4P38792 PST2YDR032C 597 nt12.34□□□□□ -0.43
RRP4P38792 PUN1YLR414C 792 nt12.34□□□□□ -0.43
RRP4P38792 TIR1YER011W 765 nt12.33□□□□□ -0.44
RRP4P38792 YJR018WYJR018W 363 nt12.3□□□□□ -0.44
RRP4P38792 BUD23YCR047C 828 nt12.25□□□□□ -0.45
RRP4P38792 PTC2YER089C 1395 nt12.24□□□□□ -0.45
RRP4P38792 SSA1YAL005C 1929 nt12.21□□□□□ -0.45
RRP4P38792 YJR120WYJR120W 351 nt12.09□□□□□ -0.47
RRP4P38792 NAB2YGL122C 1578 nt12.06□□□□□ -0.48
RRP4P38792 SRB2YHR041C 633 nt12.02□□□□□ -0.49
RRP4P38792 RPP2BYDR382W 333 nt12□□□□□ -0.49
RRP4P38792 BDF1YLR399C 2061 nt11.99□□□□□ -0.49
RRP4P38792 FPR4YLR449W 1179 nt11.93□□□□□ -0.5
RRP4P38792 SHU1YHL006C 453 nt11.9□□□□□ -0.5
RRP4P38792 DAL1YIR027C 1383 nt11.9□□□□□ -0.5
RRP4P38792 FIS1YIL065C 468 nt11.89□□□□□ -0.51
RRP4P38792 INM2YDR287W 879 nt11.85□□□□□ -0.51
RRP4P38792 YKL097CYKL097C 411 nt11.81□□□□□ -0.52
RRP4P38792 YAL037C-BYAL037C-B 975 nt11.8□□□□□ -0.52
RRP4P38792 WWM1YFL010C 636 nt11.79□□□□□ -0.52
RRP4P38792 PHO4YFR034C 939 nt11.79□□□□□ -0.52
RRP4P38792 TAT1YBR069C 1860 nt11.78□□□□□ -0.52
RRP4P38792 BDH2YAL061W 1254 nt11.74□□□□□ -0.53
RRP4P38792 YBL100CYBL100C 315 nt11.74□□□□□ -0.53
RRP4P38792 MEP2YNL142W 1500 nt11.72□□□□□ -0.53
RRP4P38792 PAC11YDR488C 1602 nt11.64□□□□□ -0.55
RRP4P38792 YGR021WYGR021W 873 nt11.62□□□□□ -0.55
RRP4P38792 FUN26YAL022C 1554 nt11.6□□□□□ -0.55
RRP4P38792 HOM6YJR139C 1080 nt11.6□□□□□ -0.55
RRP4P38792 YPS1YLR120C 1710 nt11.58□□□□□ -0.56
RRP4P38792 MNP1YGL068W 585 nt11.58□□□□□ -0.56
RRP4P38792 DCW1YKL046C 1350 nt11.57□□□□□ -0.56
RRP4P38792 TRM9YML014W 840 nt11.56□□□□□ -0.56
RRP4P38792 YFL021C-AYFL021C-A 855 nt11.55□□□□□ -0.56
RRP4P38792 LSM3YLR438C-A 270 nt11.54□□□□□ -0.56
RRP4P38792 YHR165W-AYHR165W-A 312 nt11.5□□□□□ -0.57
RRP4P38792 YDR095CYDR095C 411 nt11.49□□□□□ -0.57
RRP4P38792 ALF1YNL148C 765 nt11.47□□□□□ -0.57
RRP4P38792 RKM5YLR137W 1104 nt11.44□□□□□ -0.58
RRP4P38792 YBR220CYBR220C 1683 nt11.41□□□□□ -0.58
RRP4P38792 CCT6YDR188W 1641 nt11.41□□□□□ -0.58
RRP4P38792 YOR139CYOR139C 393 nt11.36□□□□□ -0.59
RRP4P38792 EMI2YDR516C 1503 nt11.35□□□□□ -0.59
RRP4P38792 Q0182Q0182 405 nt11.34□□□□□ -0.59
RRP4P38792 SUF2tP(AGG)C 72 nt11.33□□□□□ -0.6
RRP4P38792 SUF10tP(AGG)N 72 nt11.33□□□□□ -0.6
RRP4P38792 NVJ2YPR091C 2313 nt11.32□□□□□ -0.6
RRP4P38792 NPL3YDR432W 1245 nt11.29□□□□□ -0.6
Retrieved 100 of 7,029 protein–RNA pairs in 10.2 ms