RNA–Protein interactions for RNA: YGL173C

XRN1, Transcript of Evolutionarily-conserved 5'-3' exonuclease, yeastyeast

Gene XRN1, Length 4,587 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
XRN1YGL173C DRS1P32892 752 aaKnown RBP6.38□□□□□ -1.39
XRN1YGL173C TFA1P36100 482 aa6.14□□□□□ -1.43
XRN1YGL173C MTC1P47018 478 aaKnown RBP6.08□□□□□ -1.44
XRN1YGL173C RQC2Q12532 1038 aaKnown RBP5.84□□□□□ -1.48
XRN1YGL173C BFR2Q06631 534 aaKnown RBP5.77□□□□□ -1.49
XRN1YGL173C AVT3P36062 692 aa5.64□□□□□ -1.51
XRN1YGL173C TAF7Q05021 590 aa5.48□□□□□ -1.53
XRN1YGL173C DIP2Q12220 943 aaPredicted RBP5.35□□□□□ -1.55
XRN1YGL173C LEO1P38439 464 aa5.28□□□□□ -1.56
XRN1YGL173C TY1B-DR4Q07793 1604 aa5.2□□□□□ -1.58
XRN1YGL173C INO80P53115 1489 aa5.08□□□□□ -1.6
XRN1YGL173C LEU3P08638 886 aa5.07□□□□□ -1.6
XRN1YGL173C MON2P48563 1636 aaPredicted RBP5.07□□□□□ -1.6
XRN1YGL173C SAS10Q12136 610 aaPredicted RBP5.03□□□□□ -1.6
XRN1YGL173C RSE1Q04693 1361 aaKnown RBP4.98□□□□□ -1.61
XRN1YGL173C TCB3Q03640 1545 aaKnown RBP4.93□□□□□ -1.62
XRN1YGL173C DMA1P38823 416 aa4.92□□□□□ -1.62
XRN1YGL173C SPA2P23201 1466 aaKnown RBP4.9□□□□□ -1.63
XRN1YGL173C RIM101P33400 625 aa4.86□□□□□ -1.63
XRN1YGL173C ISW2Q08773 1120 aa4.82□□□□□ -1.64
XRN1YGL173C SIN3P22579 1536 aa4.8□□□□□ -1.64
XRN1YGL173C SWR1Q05471 1514 aa4.8□□□□□ -1.64
XRN1YGL173C RPN1P38764 993 aaKnown RBP4.79□□□□□ -1.64
XRN1YGL173C HSL1P34244 1518 aa4.78□□□□□ -1.64
XRN1YGL173C SGS1P35187 1447 aa4.78□□□□□ -1.64
XRN1YGL173C SPT21P35209 758 aa4.77□□□□□ -1.65
XRN1YGL173C YPR148CQ06523 435 aa4.73□□□□□ -1.65
XRN1YGL173C SSP1P38871 571 aa4.73□□□□□ -1.65
XRN1YGL173C RLF2Q12495 606 aa4.72□□□□□ -1.65
XRN1YGL173C CKB1P43639 278 aa4.71□□□□□ -1.66
XRN1YGL173C DNA2P38859 1522 aa4.7□□□□□ -1.66
XRN1YGL173C SSK2P53599 1579 aa4.7□□□□□ -1.66
XRN1YGL173C HIR3P47171 1648 aa4.7□□□□□ -1.66
XRN1YGL173C KOG1P38873 1557 aa4.69□□□□□ -1.66
XRN1YGL173C AIM44Q99299 758 aa4.69□□□□□ -1.66
XRN1YGL173C IFH1P39520 1085 aa4.69□□□□□ -1.66
XRN1YGL173C SSN2P38931 1420 aa4.67□□□□□ -1.66
XRN1YGL173C NOP53Q12080 455 aaKnown RBP4.67□□□□□ -1.66
XRN1YGL173C THO2P53552 1597 aaKnown RBP4.66□□□□□ -1.66
XRN1YGL173C PEP1P32319 1579 aa4.65□□□□□ -1.66
XRN1YGL173C ATG2P53855 1592 aa4.65□□□□□ -1.67
XRN1YGL173C ARP8Q12386 881 aaKnown RBP RIP-Chip data4.65□□□□□ -1.67not detected
XRN1YGL173C PRI1P10363 409 aa4.63□□□□□ -1.67
XRN1YGL173C NAP1P25293 417 aaKnown RBP4.61□□□□□ -1.67
XRN1YGL173C ESP1Q03018 1630 aa4.61□□□□□ -1.67
XRN1YGL173C NOP8Q08287 484 aaPredicted RBP4.6□□□□□ -1.67
XRN1YGL173C TY1B-DR3Q99231 1755 aa4.59□□□□□ -1.67
XRN1YGL173C RPL17AP05740 184 aaKnown RBP4.59□□□□□ -1.67
XRN1YGL173C RPL17BP46990 184 aaKnown RBP4.59□□□□□ -1.67
XRN1YGL173C TY2B-LR1P0C2J3 1770 aa4.59□□□□□ -1.67
XRN1YGL173C TY2B-FP0CX63 1770 aa4.59□□□□□ -1.67
XRN1YGL173C TY2B-GR2P0CX64 1770 aa4.59□□□□□ -1.67
XRN1YGL173C TY2B-CP25384 1770 aa4.59□□□□□ -1.67
XRN1YGL173C TY2B-DR2Q03494 1770 aa4.59□□□□□ -1.67
XRN1YGL173C TY1B-DR1Q03855 1755 aa4.59□□□□□ -1.67
XRN1YGL173C TY2B-DR3Q07791 1770 aaKnown RBP4.59□□□□□ -1.67
XRN1YGL173C TY2B-OR1Q12113 1770 aa4.59□□□□□ -1.67
XRN1YGL173C TY2B-DR1Q12472 1770 aa4.59□□□□□ -1.67
XRN1YGL173C TY2B-OR2Q12501 1770 aa4.59□□□□□ -1.67
XRN1YGL173C MGA2P40578 1113 aa4.59□□□□□ -1.67
XRN1YGL173C SPT6P23615 1451 aaKnown RBP4.59□□□□□ -1.68
XRN1YGL173C AIM7Q12156 149 aa4.58□□□□□ -1.68
XRN1YGL173C HGH1P48362 394 aaKnown RBP4.58□□□□□ -1.68
XRN1YGL173C XRN1P22147 1528 aaKnown RBP4.58□□□□□ -1.68
XRN1YGL173C ORC1P54784 914 aaPredicted RBP4.58□□□□□ -1.68
XRN1YGL173C TY1B-BRQ12193 1756 aa4.57□□□□□ -1.68
XRN1YGL173C TY1B-GR3Q12316 1755 aa4.57□□□□□ -1.68
XRN1YGL173C TY1B-ORQ92393 1755 aa4.57□□□□□ -1.68
XRN1YGL173C RPG1P38249 964 aaKnown RBP4.56□□□□□ -1.68
XRN1YGL173C DSF2P38213 736 aa4.56□□□□□ -1.68
XRN1YGL173C YNR021WP53723 404 aaKnown RBP4.56□□□□□ -1.68
XRN1YGL173C TY2B-BQ12491 1770 aa4.55□□□□□ -1.68
XRN1YGL173C TY1B-HO13535 1793 aa4.55□□□□□ -1.68
XRN1YGL173C TY1B-DR5P0C2I2 1755 aa4.55□□□□□ -1.68
XRN1YGL173C TY1B-DR6P0C2I3 1755 aa4.55□□□□□ -1.68
XRN1YGL173C TY1B-LR2P0C2I5 1755 aa4.55□□□□□ -1.68
XRN1YGL173C TY1B-LR3P0C2I6 1755 aaKnown RBP4.55□□□□□ -1.68
XRN1YGL173C TY1B-PR1P0C2I9 1755 aaKnown RBP4.55□□□□□ -1.68
XRN1YGL173C TY1B-PR2P0C2J0 1756 aa4.55□□□□□ -1.68
XRN1YGL173C TY1B-PR3P0C2J1 1755 aaKnown RBP4.55□□□□□ -1.68
XRN1YGL173C TY1B-JR1P47098 1755 aa4.55□□□□□ -1.68
XRN1YGL173C TY1B-ML2Q03434 1755 aaKnown RBP4.55□□□□□ -1.68
XRN1YGL173C TY1B-ER1Q03612 1755 aa4.55□□□□□ -1.68
XRN1YGL173C TY1B-ML1Q04711 1755 aaKnown RBP4.55□□□□□ -1.68
XRN1YGL173C TY1B-GR2Q12269 1755 aa4.55□□□□□ -1.68
XRN1YGL173C TY1B-OLQ12273 1755 aa4.55□□□□□ -1.68
XRN1YGL173C TY1B-PLQ12414 1755 aaKnown RBP4.55□□□□□ -1.68
XRN1YGL173C OXP1P28273 1286 aa4.54□□□□□ -1.68
XRN1YGL173C REV3P14284 1504 aa4.53□□□□□ -1.68
XRN1YGL173C DOS2P54858 310 aa4.51□□□□□ -1.69
XRN1YGL173C HPC2Q01448 625 aa4.51□□□□□ -1.69
XRN1YGL173C CHD1P32657 1468 aa4.51□□□□□ -1.69
XRN1YGL173C MAK21Q12176 1025 aaKnown RBP4.51□□□□□ -1.69
XRN1YGL173C YLR271WQ06152 274 aa4.5□□□□□ -1.69
XRN1YGL173C ABP1P15891 592 aaKnown RBP4.48□□□□□ -1.69
XRN1YGL173C REB1P21538 810 aa4.48□□□□□ -1.69
XRN1YGL173C PTP3P40048 928 aa4.48□□□□□ -1.69
XRN1YGL173C PSD2P53037 1138 aaKnown RBP4.48□□□□□ -1.69
XRN1YGL173C MYO2P19524 1574 aaKnown RBP4.46□□□□□ -1.7
XRN1YGL173C TOP1P04786 769 aa4.44□□□□□ -1.7
Retrieved 100 of 5,963 RNA–protein pairs in 12.9 ms