Protein–RNA interactions for Protein: P53728

CPR8, Peptidyl-prolyl cis-trans isomerase CYP8, yeastyeast

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CPR8P53728 NSR1YGR159C 1245 nt18.07■□□□□ 0.48
CPR8P53728 YML009W-BYML009W-B 477 nt17.66■□□□□ 0.42
CPR8P53728 NOP1YDL014W 984 nt16.88■□□□□ 0.29
CPR8P53728 MDJ1YFL016C 1536 nt16.67■□□□□ 0.26
CPR8P53728 YJL027CYJL027C 417 nt15.29■□□□□ 0.04
CPR8P53728 YKL036CYKL036C 393 nt15.02■□□□□ -0
CPR8P53728 SRX1YKL086W 384 nt14.77□□□□□ -0.05
CPR8P53728 Q0297Q0297 156 nt14.6□□□□□ -0.07
CPR8P53728 DBP2YNL112W 1641 nt14.51□□□□□ -0.09
CPR8P53728 YBR190WYBR190W 312 nt14.34□□□□□ -0.11
CPR8P53728 SSA3YBL075C 1950 nt14.14□□□□□ -0.15
CPR8P53728 RTC3YHR087W 336 nt13.99□□□□□ -0.17
CPR8P53728 YCR051WYCR051W 669 nt13.97□□□□□ -0.17
CPR8P53728 TRN1tP(UGG)A 72 nt13.73□□□□□ -0.21
CPR8P53728 SUF9tP(UGG)F 72 nt13.73□□□□□ -0.21
CPR8P53728 SUF8tP(UGG)H 72 nt13.73□□□□□ -0.21
CPR8P53728 tP(UGG)LtP(UGG)L 72 nt13.73□□□□□ -0.21
CPR8P53728 SUF7tP(UGG)M 72 nt13.73□□□□□ -0.21
CPR8P53728 tP(UGG)N1tP(UGG)N1 72 nt13.73□□□□□ -0.21
CPR8P53728 tP(UGG)N2tP(UGG)N2 72 nt13.73□□□□□ -0.21
CPR8P53728 tP(UGG)O1tP(UGG)O1 72 nt13.73□□□□□ -0.21
CPR8P53728 SUF11tP(UGG)O2 72 nt13.73□□□□□ -0.21
CPR8P53728 CCC1YLR220W 969 nt13.6□□□□□ -0.23
CPR8P53728 PUT4YOR348C 1884 nt13.52□□□□□ -0.25
CPR8P53728 RVS167YDR388W 1449 nt13.44□□□□□ -0.26
CPR8P53728 SCS3YGL126W 1143 nt13.37□□□□□ -0.27
CPR8P53728 SCJ1YMR214W 1134 nt13.31□□□□□ -0.28
CPR8P53728 RPP1BYDL130W 321 nt13.1□□□□□ -0.31
CPR8P53728 ARE1YCR048W 1833 nt13.09□□□□□ -0.31
CPR8P53728 YOL085CYOL085C 342 nt13.05□□□□□ -0.32
CPR8P53728 POA1YBR022W 534 nt13.05□□□□□ -0.32
CPR8P53728 PKP1YIL042C 1185 nt12.95□□□□□ -0.34
CPR8P53728 YHR049C-AYHR049C-A 297 nt12.92□□□□□ -0.34
CPR8P53728 SAH1YER043C 1350 nt12.91□□□□□ -0.34
CPR8P53728 BSC6YOL137W 1494 nt12.89□□□□□ -0.35
CPR8P53728 URN1YPR152C 1398 nt12.88□□□□□ -0.35
CPR8P53728 SHR5YOL110W 714 nt12.85□□□□□ -0.35
CPR8P53728 OPI9YLR338W 858 nt12.81□□□□□ -0.36
CPR8P53728 tP(UGG)O3tP(UGG)O3 72 nt12.79□□□□□ -0.36
CPR8P53728 SPT5YML010W 3192 nt12.76□□□□□ -0.37
CPR8P53728 DEP1YAL013W 1218 nt12.72□□□□□ -0.37
CPR8P53728 PET122YER153C 765 nt12.61□□□□□ -0.39
CPR8P53728 SSA4YER103W 1929 nt12.6□□□□□ -0.39
CPR8P53728 BUD23YCR047C 828 nt12.56□□□□□ -0.4
CPR8P53728 RPN10YHR200W 807 nt12.5□□□□□ -0.41
CPR8P53728 PUN1YLR414C 792 nt12.42□□□□□ -0.42
CPR8P53728 YNL208WYNL208W 600 nt12.42□□□□□ -0.42
CPR8P53728 PTC2YER089C 1395 nt12.41□□□□□ -0.42
CPR8P53728 YDJ1YNL064C 1230 nt12.36□□□□□ -0.43
CPR8P53728 NAB2YGL122C 1578 nt12.3□□□□□ -0.44
CPR8P53728 SCR1SCR1 522 nt12.26□□□□□ -0.45
CPR8P53728 YJR018WYJR018W 363 nt12.24□□□□□ -0.45
CPR8P53728 GAR1YHR089C 618 nt12.21□□□□□ -0.45
CPR8P53728 BDF1YLR399C 2061 nt12.18□□□□□ -0.46
CPR8P53728 RRN5YLR141W 1092 nt12.18□□□□□ -0.46
CPR8P53728 MEP2YNL142W 1500 nt12.15□□□□□ -0.46
CPR8P53728 FIS1YIL065C 468 nt12.1□□□□□ -0.47
CPR8P53728 DAL1YIR027C 1383 nt12.03□□□□□ -0.48
CPR8P53728 TAT1YBR069C 1860 nt12□□□□□ -0.49
CPR8P53728 FPR4YLR449W 1179 nt12□□□□□ -0.49
CPR8P53728 DCW1YKL046C 1350 nt11.97□□□□□ -0.49
CPR8P53728 YJR120WYJR120W 351 nt11.97□□□□□ -0.49
CPR8P53728 YER088W-BYER088W-B 147 nt11.93□□□□□ -0.5
CPR8P53728 PHO4YFR034C 939 nt11.93□□□□□ -0.5
CPR8P53728 YPS1YLR120C 1710 nt11.91□□□□□ -0.5
CPR8P53728 INM2YDR287W 879 nt11.86□□□□□ -0.51
CPR8P53728 SSA1YAL005C 1929 nt11.82□□□□□ -0.52
CPR8P53728 YHR165W-AYHR165W-A 312 nt11.82□□□□□ -0.52
CPR8P53728 TIR1YER011W 765 nt11.81□□□□□ -0.52
CPR8P53728 RPP2BYDR382W 333 nt11.8□□□□□ -0.52
CPR8P53728 EMI2YDR516C 1503 nt11.78□□□□□ -0.52
CPR8P53728 ATS1YAL020C 1002 nt11.78□□□□□ -0.52
CPR8P53728 YBR220CYBR220C 1683 nt11.78□□□□□ -0.52
CPR8P53728 YDR095CYDR095C 411 nt11.74□□□□□ -0.53
CPR8P53728 RSB1YOR049C 1065 nt11.74□□□□□ -0.53
CPR8P53728 YMR090WYMR090W 684 nt11.7□□□□□ -0.54
CPR8P53728 YBL100CYBL100C 315 nt11.67□□□□□ -0.54
CPR8P53728 PAC11YDR488C 1602 nt11.67□□□□□ -0.54
CPR8P53728 YDL221WYDL221W 552 nt11.63□□□□□ -0.55
CPR8P53728 SDH1YKL148C 1923 nt11.61□□□□□ -0.55
CPR8P53728 CAC2YML102W 1407 nt11.6□□□□□ -0.55
CPR8P53728 PTP1YDL230W 1008 nt11.57□□□□□ -0.56
CPR8P53728 SRB2YHR041C 633 nt11.55□□□□□ -0.56
CPR8P53728 RPP2AYOL039W 321 nt11.52□□□□□ -0.57
CPR8P53728 FUN26YAL022C 1554 nt11.52□□□□□ -0.57
CPR8P53728 BDH2YAL061W 1254 nt11.48□□□□□ -0.57
CPR8P53728 PCH2YBR186W 1695 nt11.46□□□□□ -0.57
CPR8P53728 ALF1YNL148C 765 nt11.46□□□□□ -0.57
CPR8P53728 SCC4YER147C 1875 nt11.44□□□□□ -0.58
CPR8P53728 GUT2YIL155C 1950 nt11.43□□□□□ -0.58
CPR8P53728 IRC15YPL017C 1500 nt11.42□□□□□ -0.58
CPR8P53728 SEC11YIR022W 504 nt11.39□□□□□ -0.59
CPR8P53728 TRM9YML014W 840 nt11.36□□□□□ -0.59
CPR8P53728 GIS3YLR094C 1509 nt11.35□□□□□ -0.59
CPR8P53728 SIS1YNL007C 1059 nt11.32□□□□□ -0.6
CPR8P53728 CCT6YDR188W 1641 nt11.29□□□□□ -0.6
CPR8P53728 PIB2YGL023C 1908 nt11.27□□□□□ -0.61
CPR8P53728 YSC84YHR016C 1407 nt11.26□□□□□ -0.61
CPR8P53728 NVJ2YPR091C 2313 nt11.26□□□□□ -0.61
CPR8P53728 GFD2YCL036W 1701 nt11.23□□□□□ -0.61
Retrieved 100 of 7,029 protein–RNA pairs in 28.4 ms