Protein–RNA interactions for Protein: P13365

CLN3, G1/S-specific cyclin CLN3, yeastyeast

Predictions only

Length 580 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
CLN3P13365 YML009W-BYML009W-B 477 nt22.81■■□□□ 1.24
CLN3P13365 NSR1YGR159C 1245 nt22.55■■□□□ 1.2
CLN3P13365 NOP1YDL014W 984 nt22.21■■□□□ 1.15
CLN3P13365 YKL036CYKL036C 393 nt20.63■□□□□ 0.89
CLN3P13365 MDJ1YFL016C 1536 nt19.91■□□□□ 0.78
CLN3P13365 Q0297Q0297 156 nt19.5■□□□□ 0.71
CLN3P13365 SRX1YKL086W 384 nt19.43■□□□□ 0.7
CLN3P13365 YJL027CYJL027C 417 nt19.28■□□□□ 0.68
CLN3P13365 SCS3YGL126W 1143 nt18.84■□□□□ 0.61
CLN3P13365 YCR051WYCR051W 669 nt18.45■□□□□ 0.54
CLN3P13365 YOL085CYOL085C 342 nt17.87■□□□□ 0.45
CLN3P13365 DBP2YNL112W 1641 nt17.68■□□□□ 0.42
CLN3P13365 PKP1YIL042C 1185 nt17.6■□□□□ 0.41
CLN3P13365 RPP1BYDL130W 321 nt17.5■□□□□ 0.39
CLN3P13365 TRN1tP(UGG)A 72 nt17.48■□□□□ 0.39
CLN3P13365 SUF9tP(UGG)F 72 nt17.48■□□□□ 0.39
CLN3P13365 SUF8tP(UGG)H 72 nt17.48■□□□□ 0.39
CLN3P13365 tP(UGG)LtP(UGG)L 72 nt17.48■□□□□ 0.39
CLN3P13365 SUF7tP(UGG)M 72 nt17.48■□□□□ 0.39
CLN3P13365 tP(UGG)N1tP(UGG)N1 72 nt17.48■□□□□ 0.39
CLN3P13365 tP(UGG)N2tP(UGG)N2 72 nt17.48■□□□□ 0.39
CLN3P13365 tP(UGG)O1tP(UGG)O1 72 nt17.48■□□□□ 0.39
CLN3P13365 SUF11tP(UGG)O2 72 nt17.48■□□□□ 0.39
CLN3P13365 CCC1YLR220W 969 nt17.32■□□□□ 0.36
CLN3P13365 YBR190WYBR190W 312 nt16.93■□□□□ 0.3
CLN3P13365 ATS1YAL020C 1002 nt16.89■□□□□ 0.29
CLN3P13365 SCJ1YMR214W 1134 nt16.84■□□□□ 0.29
CLN3P13365 PET122YER153C 765 nt16.7■□□□□ 0.26
CLN3P13365 RVS167YDR388W 1449 nt16.62■□□□□ 0.25
CLN3P13365 tP(UGG)O3tP(UGG)O3 72 nt16.59■□□□□ 0.25
CLN3P13365 RTC3YHR087W 336 nt16.57■□□□□ 0.24
CLN3P13365 SCR1SCR1 522 nt16.55■□□□□ 0.24
CLN3P13365 RRN5YLR141W 1092 nt16.25■□□□□ 0.19
CLN3P13365 SHR5YOL110W 714 nt16.08■□□□□ 0.16
CLN3P13365 YDJ1YNL064C 1230 nt16.04■□□□□ 0.16
CLN3P13365 RSB1YOR049C 1065 nt15.94■□□□□ 0.14
CLN3P13365 YER088W-BYER088W-B 147 nt15.92■□□□□ 0.14
CLN3P13365 GAR1YHR089C 618 nt15.67■□□□□ 0.1
CLN3P13365 PST2YDR032C 597 nt15.63■□□□□ 0.09
CLN3P13365 DEP1YAL013W 1218 nt15.61■□□□□ 0.09
CLN3P13365 URN1YPR152C 1398 nt15.57■□□□□ 0.08
CLN3P13365 YNL208WYNL208W 600 nt15.36■□□□□ 0.05
CLN3P13365 RPN10YHR200W 807 nt15.34■□□□□ 0.05
CLN3P13365 OPI9YLR338W 858 nt15.31■□□□□ 0.04
CLN3P13365 PUT4YOR348C 1884 nt15.27■□□□□ 0.04
CLN3P13365 SAH1YER043C 1350 nt15.19■□□□□ 0.02
CLN3P13365 TIR1YER011W 765 nt15.14■□□□□ 0.01
CLN3P13365 YKL097CYKL097C 411 nt15.07■□□□□ 0
CLN3P13365 ARE1YCR048W 1833 nt15.04■□□□□ -0
CLN3P13365 SSA3YBL075C 1950 nt15.03■□□□□ -0
CLN3P13365 SHU1YHL006C 453 nt14.97□□□□□ -0.01
CLN3P13365 SSA1YAL005C 1929 nt14.94□□□□□ -0.02
CLN3P13365 YJR018WYJR018W 363 nt14.86□□□□□ -0.03
CLN3P13365 PUN1YLR414C 792 nt14.86□□□□□ -0.03
CLN3P13365 YHR049C-AYHR049C-A 297 nt14.84□□□□□ -0.03
CLN3P13365 POA1YBR022W 534 nt14.83□□□□□ -0.04
CLN3P13365 SRB2YHR041C 633 nt14.72□□□□□ -0.05
CLN3P13365 YAL037C-BYAL037C-B 975 nt14.72□□□□□ -0.05
CLN3P13365 PTC2YER089C 1395 nt14.66□□□□□ -0.06
CLN3P13365 YJR120WYJR120W 351 nt14.66□□□□□ -0.06
CLN3P13365 RPP2BYDR382W 333 nt14.58□□□□□ -0.08
CLN3P13365 BUD23YCR047C 828 nt14.53□□□□□ -0.08
CLN3P13365 WWM1YFL010C 636 nt14.51□□□□□ -0.09
CLN3P13365 BSC6YOL137W 1494 nt14.46□□□□□ -0.09
CLN3P13365 NAB2YGL122C 1578 nt14.45□□□□□ -0.1
CLN3P13365 YOR139CYOR139C 393 nt14.45□□□□□ -0.1
CLN3P13365 YGR021WYGR021W 873 nt14.43□□□□□ -0.1
CLN3P13365 HOM6YJR139C 1080 nt14.4□□□□□ -0.1
CLN3P13365 MNP1YGL068W 585 nt14.36□□□□□ -0.11
CLN3P13365 BDH2YAL061W 1254 nt14.33□□□□□ -0.12
CLN3P13365 INM2YDR287W 879 nt14.31□□□□□ -0.12
CLN3P13365 NPL3YDR432W 1245 nt14.29□□□□□ -0.12
CLN3P13365 DAL1YIR027C 1383 nt14.27□□□□□ -0.12
CLN3P13365 FPR4YLR449W 1179 nt14.26□□□□□ -0.13
CLN3P13365 YFL021C-AYFL021C-A 855 nt14.25□□□□□ -0.13
CLN3P13365 FIS1YIL065C 468 nt14.24□□□□□ -0.13
CLN3P13365 RKM5YLR137W 1104 nt14.19□□□□□ -0.14
CLN3P13365 YBL100CYBL100C 315 nt14.19□□□□□ -0.14
CLN3P13365 LSM3YLR438C-A 270 nt14.16□□□□□ -0.14
CLN3P13365 YOL037CYOL037C 354 nt14.15□□□□□ -0.14
CLN3P13365 PHO4YFR034C 939 nt14.14□□□□□ -0.15
CLN3P13365 TRM9YML014W 840 nt14.03□□□□□ -0.16
CLN3P13365 FUN26YAL022C 1554 nt14.03□□□□□ -0.16
CLN3P13365 SPT5YML010W 3192 nt13.93□□□□□ -0.18
CLN3P13365 tM(CAU)CtM(CAU)C 72 nt13.89□□□□□ -0.19
CLN3P13365 IMT4tM(CAU)E 72 nt13.89□□□□□ -0.19
CLN3P13365 IMT3tM(CAU)J3 72 nt13.89□□□□□ -0.19
CLN3P13365 IMT1tM(CAU)O1 72 nt13.89□□□□□ -0.19
CLN3P13365 IMT2tM(CAU)P 72 nt13.89□□□□□ -0.19
CLN3P13365 CCT6YDR188W 1641 nt13.87□□□□□ -0.19
CLN3P13365 YLR281CYLR281C 468 nt13.84□□□□□ -0.19
CLN3P13365 YPS1YLR120C 1710 nt13.82□□□□□ -0.2
CLN3P13365 ALF1YNL148C 765 nt13.79□□□□□ -0.2
CLN3P13365 WHI5YOR083W 888 nt13.78□□□□□ -0.2
CLN3P13365 YDR095CYDR095C 411 nt13.76□□□□□ -0.21
CLN3P13365 PUS2YGL063W 1113 nt13.76□□□□□ -0.21
CLN3P13365 SUF2tP(AGG)C 72 nt13.73□□□□□ -0.21
CLN3P13365 SUF10tP(AGG)N 72 nt13.73□□□□□ -0.21
CLN3P13365 YHR165W-AYHR165W-A 312 nt13.66□□□□□ -0.22
CLN3P13365 YLR154C-GYLR154C-G 150 nt13.65□□□□□ -0.22
Retrieved 100 of 7,029 protein–RNA pairs in 46.2 ms