Protein–RNA interactions for Protein: P40073

SHO1, High osmolarity signaling protein SHO1, yeastyeast

Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SHO1P40073 YML009W-BYML009W-B 477 nt18.32■□□□□ 0.52
SHO1P40073 NSR1YGR159C 1245 nt18.26■□□□□ 0.51
SHO1P40073 NOP1YDL014W 984 nt17.9■□□□□ 0.46
SHO1P40073 YKL036CYKL036C 393 nt16.53■□□□□ 0.24
SHO1P40073 MDJ1YFL016C 1536 nt16.08■□□□□ 0.16
SHO1P40073 Q0297Q0297 156 nt15.69■□□□□ 0.1
SHO1P40073 SRX1YKL086W 384 nt15.64■□□□□ 0.09
SHO1P40073 YJL027CYJL027C 417 nt15.42■□□□□ 0.06
SHO1P40073 SCS3YGL126W 1143 nt15.03■□□□□ -0
SHO1P40073 YCR051WYCR051W 669 nt14.78□□□□□ -0.04
SHO1P40073 YOL085CYOL085C 342 nt14.32□□□□□ -0.12
SHO1P40073 DBP2YNL112W 1641 nt14.28□□□□□ -0.12
SHO1P40073 TRN1tP(UGG)A 72 nt14.1□□□□□ -0.15
SHO1P40073 SUF9tP(UGG)F 72 nt14.1□□□□□ -0.15
SHO1P40073 SUF8tP(UGG)H 72 nt14.1□□□□□ -0.15
SHO1P40073 tP(UGG)LtP(UGG)L 72 nt14.1□□□□□ -0.15
SHO1P40073 SUF7tP(UGG)M 72 nt14.1□□□□□ -0.15
SHO1P40073 tP(UGG)N1tP(UGG)N1 72 nt14.1□□□□□ -0.15
SHO1P40073 tP(UGG)N2tP(UGG)N2 72 nt14.1□□□□□ -0.15
SHO1P40073 tP(UGG)O1tP(UGG)O1 72 nt14.1□□□□□ -0.15
SHO1P40073 SUF11tP(UGG)O2 72 nt14.1□□□□□ -0.15
SHO1P40073 RPP1BYDL130W 321 nt14.06□□□□□ -0.16
SHO1P40073 PKP1YIL042C 1185 nt14.02□□□□□ -0.17
SHO1P40073 CCC1YLR220W 969 nt13.9□□□□□ -0.18
SHO1P40073 YBR190WYBR190W 312 nt13.78□□□□□ -0.2
SHO1P40073 ATS1YAL020C 1002 nt13.48□□□□□ -0.25
SHO1P40073 RVS167YDR388W 1449 nt13.47□□□□□ -0.25
SHO1P40073 SCJ1YMR214W 1134 nt13.46□□□□□ -0.25
SHO1P40073 RTC3YHR087W 336 nt13.41□□□□□ -0.26
SHO1P40073 PET122YER153C 765 nt13.38□□□□□ -0.27
SHO1P40073 tP(UGG)O3tP(UGG)O3 72 nt13.34□□□□□ -0.27
SHO1P40073 SCR1SCR1 522 nt13.3□□□□□ -0.28
SHO1P40073 RRN5YLR141W 1092 nt13.02□□□□□ -0.33
SHO1P40073 SHR5YOL110W 714 nt13□□□□□ -0.33
SHO1P40073 YDJ1YNL064C 1230 nt12.95□□□□□ -0.34
SHO1P40073 YER088W-BYER088W-B 147 nt12.77□□□□□ -0.37
SHO1P40073 RSB1YOR049C 1065 nt12.74□□□□□ -0.37
SHO1P40073 URN1YPR152C 1398 nt12.58□□□□□ -0.4
SHO1P40073 GAR1YHR089C 618 nt12.58□□□□□ -0.4
SHO1P40073 DEP1YAL013W 1218 nt12.54□□□□□ -0.4
SHO1P40073 PST2YDR032C 597 nt12.5□□□□□ -0.41
SHO1P40073 PUT4YOR348C 1884 nt12.45□□□□□ -0.42
SHO1P40073 RPN10YHR200W 807 nt12.44□□□□□ -0.42
SHO1P40073 OPI9YLR338W 858 nt12.43□□□□□ -0.42
SHO1P40073 YNL208WYNL208W 600 nt12.43□□□□□ -0.42
SHO1P40073 SSA3YBL075C 1950 nt12.3□□□□□ -0.44
SHO1P40073 SAH1YER043C 1350 nt12.3□□□□□ -0.44
SHO1P40073 ARE1YCR048W 1833 nt12.23□□□□□ -0.45
SHO1P40073 TIR1YER011W 765 nt12.19□□□□□ -0.46
SHO1P40073 PUN1YLR414C 792 nt12.07□□□□□ -0.48
SHO1P40073 YHR049C-AYHR049C-A 297 nt12.04□□□□□ -0.48
SHO1P40073 YJR018WYJR018W 363 nt12.03□□□□□ -0.48
SHO1P40073 POA1YBR022W 534 nt12.03□□□□□ -0.48
SHO1P40073 SSA1YAL005C 1929 nt12.02□□□□□ -0.49
SHO1P40073 YKL097CYKL097C 411 nt12□□□□□ -0.49
SHO1P40073 SHU1YHL006C 453 nt11.94□□□□□ -0.5
SHO1P40073 PTC2YER089C 1395 nt11.89□□□□□ -0.51
SHO1P40073 YJR120WYJR120W 351 nt11.83□□□□□ -0.52
SHO1P40073 RPP2BYDR382W 333 nt11.8□□□□□ -0.52
SHO1P40073 SRB2YHR041C 633 nt11.79□□□□□ -0.52
SHO1P40073 BSC6YOL137W 1494 nt11.76□□□□□ -0.53
SHO1P40073 NAB2YGL122C 1578 nt11.75□□□□□ -0.53
SHO1P40073 BUD23YCR047C 828 nt11.75□□□□□ -0.53
SHO1P40073 YAL037C-BYAL037C-B 975 nt11.7□□□□□ -0.54
SHO1P40073 INM2YDR287W 879 nt11.63□□□□□ -0.55
SHO1P40073 WWM1YFL010C 636 nt11.63□□□□□ -0.55
SHO1P40073 YGR021WYGR021W 873 nt11.63□□□□□ -0.55
SHO1P40073 DAL1YIR027C 1383 nt11.6□□□□□ -0.55
SHO1P40073 HOM6YJR139C 1080 nt11.58□□□□□ -0.56
SHO1P40073 BDH2YAL061W 1254 nt11.58□□□□□ -0.56
SHO1P40073 FIS1YIL065C 468 nt11.56□□□□□ -0.56
SHO1P40073 FPR4YLR449W 1179 nt11.51□□□□□ -0.57
SHO1P40073 YOR139CYOR139C 393 nt11.5□□□□□ -0.57
SHO1P40073 YFL021C-AYFL021C-A 855 nt11.49□□□□□ -0.57
SHO1P40073 LSM3YLR438C-A 270 nt11.48□□□□□ -0.57
SHO1P40073 YBL100CYBL100C 315 nt11.48□□□□□ -0.57
SHO1P40073 PHO4YFR034C 939 nt11.46□□□□□ -0.57
SHO1P40073 MNP1YGL068W 585 nt11.46□□□□□ -0.57
SHO1P40073 NPL3YDR432W 1245 nt11.4□□□□□ -0.58
SHO1P40073 RKM5YLR137W 1104 nt11.4□□□□□ -0.58
SHO1P40073 YOL037CYOL037C 354 nt11.37□□□□□ -0.59
SHO1P40073 TRM9YML014W 840 nt11.36□□□□□ -0.59
SHO1P40073 FUN26YAL022C 1554 nt11.35□□□□□ -0.59
SHO1P40073 CCT6YDR188W 1641 nt11.25□□□□□ -0.61
SHO1P40073 YPS1YLR120C 1710 nt11.25□□□□□ -0.61
SHO1P40073 SPT5YML010W 3192 nt11.24□□□□□ -0.61
SHO1P40073 YDR095CYDR095C 411 nt11.19□□□□□ -0.62
SHO1P40073 ALF1YNL148C 765 nt11.17□□□□□ -0.62
SHO1P40073 SUF2tP(AGG)C 72 nt11.15□□□□□ -0.62
SHO1P40073 SUF10tP(AGG)N 72 nt11.15□□□□□ -0.62
SHO1P40073 YLR281CYLR281C 468 nt11.1□□□□□ -0.63
SHO1P40073 YHR165W-AYHR165W-A 312 nt11.09□□□□□ -0.63
SHO1P40073 tM(CAU)CtM(CAU)C 72 nt11.07□□□□□ -0.64
SHO1P40073 IMT4tM(CAU)E 72 nt11.07□□□□□ -0.64
SHO1P40073 IMT3tM(CAU)J3 72 nt11.07□□□□□ -0.64
SHO1P40073 IMT1tM(CAU)O1 72 nt11.07□□□□□ -0.64
SHO1P40073 IMT2tM(CAU)P 72 nt11.07□□□□□ -0.64
SHO1P40073 MEP2YNL142W 1500 nt11.07□□□□□ -0.64
SHO1P40073 SIS1YNL007C 1059 nt11.05□□□□□ -0.64
SHO1P40073 WHI5YOR083W 888 nt11.03□□□□□ -0.64
Retrieved 100 of 7,029 protein–RNA pairs in 12.9 ms