Protein–RNA interactions for Protein: Q04629

SWF1, Palmitoyltransferase SWF1, yeastyeast

Predictions only

Length 336 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SWF1Q04629 NSR1YGR159C 1245 nt19.47■□□□□ 0.71
SWF1Q04629 YML009W-BYML009W-B 477 nt19.47■□□□□ 0.71
SWF1Q04629 NOP1YDL014W 984 nt18.91■□□□□ 0.62
SWF1Q04629 YKL036CYKL036C 393 nt17.35■□□□□ 0.37
SWF1Q04629 MDJ1YFL016C 1536 nt17.34■□□□□ 0.37
SWF1Q04629 SRX1YKL086W 384 nt16.53■□□□□ 0.24
SWF1Q04629 Q0297Q0297 156 nt16.52■□□□□ 0.24
SWF1Q04629 YJL027CYJL027C 417 nt16.17■□□□□ 0.18
SWF1Q04629 SCS3YGL126W 1143 nt15.73■□□□□ 0.11
SWF1Q04629 YCR051WYCR051W 669 nt15.66■□□□□ 0.1
SWF1Q04629 DBP2YNL112W 1641 nt15.32■□□□□ 0.04
SWF1Q04629 YOL085CYOL085C 342 nt15.03■□□□□ -0
SWF1Q04629 TRN1tP(UGG)A 72 nt14.98□□□□□ -0.01
SWF1Q04629 SUF9tP(UGG)F 72 nt14.98□□□□□ -0.01
SWF1Q04629 SUF8tP(UGG)H 72 nt14.98□□□□□ -0.01
SWF1Q04629 tP(UGG)LtP(UGG)L 72 nt14.98□□□□□ -0.01
SWF1Q04629 SUF7tP(UGG)M 72 nt14.98□□□□□ -0.01
SWF1Q04629 tP(UGG)N1tP(UGG)N1 72 nt14.98□□□□□ -0.01
SWF1Q04629 tP(UGG)N2tP(UGG)N2 72 nt14.98□□□□□ -0.01
SWF1Q04629 tP(UGG)O1tP(UGG)O1 72 nt14.98□□□□□ -0.01
SWF1Q04629 SUF11tP(UGG)O2 72 nt14.98□□□□□ -0.01
SWF1Q04629 CCC1YLR220W 969 nt14.84□□□□□ -0.03
SWF1Q04629 YBR190WYBR190W 312 nt14.84□□□□□ -0.03
SWF1Q04629 RPP1BYDL130W 321 nt14.82□□□□□ -0.04
SWF1Q04629 PKP1YIL042C 1185 nt14.81□□□□□ -0.04
SWF1Q04629 RTC3YHR087W 336 nt14.49□□□□□ -0.09
SWF1Q04629 RVS167YDR388W 1449 nt14.39□□□□□ -0.11
SWF1Q04629 SCJ1YMR214W 1134 nt14.27□□□□□ -0.13
SWF1Q04629 PET122YER153C 765 nt14.17□□□□□ -0.14
SWF1Q04629 tP(UGG)O3tP(UGG)O3 72 nt14.15□□□□□ -0.14
SWF1Q04629 ATS1YAL020C 1002 nt14.05□□□□□ -0.16
SWF1Q04629 SCR1SCR1 522 nt14□□□□□ -0.17
SWF1Q04629 SHR5YOL110W 714 nt13.86□□□□□ -0.19
SWF1Q04629 RRN5YLR141W 1092 nt13.75□□□□□ -0.21
SWF1Q04629 YDJ1YNL064C 1230 nt13.7□□□□□ -0.22
SWF1Q04629 SSA3YBL075C 1950 nt13.58□□□□□ -0.24
SWF1Q04629 PUT4YOR348C 1884 nt13.54□□□□□ -0.24
SWF1Q04629 URN1YPR152C 1398 nt13.54□□□□□ -0.24
SWF1Q04629 DEP1YAL013W 1218 nt13.49□□□□□ -0.25
SWF1Q04629 YER088W-BYER088W-B 147 nt13.48□□□□□ -0.25
SWF1Q04629 RSB1YOR049C 1065 nt13.43□□□□□ -0.26
SWF1Q04629 GAR1YHR089C 618 nt13.39□□□□□ -0.27
SWF1Q04629 OPI9YLR338W 858 nt13.36□□□□□ -0.27
SWF1Q04629 RPN10YHR200W 807 nt13.31□□□□□ -0.28
SWF1Q04629 SAH1YER043C 1350 nt13.3□□□□□ -0.28
SWF1Q04629 YNL208WYNL208W 600 nt13.28□□□□□ -0.28
SWF1Q04629 ARE1YCR048W 1833 nt13.27□□□□□ -0.28
SWF1Q04629 POA1YBR022W 534 nt13.11□□□□□ -0.31
SWF1Q04629 YHR049C-AYHR049C-A 297 nt13.08□□□□□ -0.32
SWF1Q04629 PST2YDR032C 597 nt13.04□□□□□ -0.32
SWF1Q04629 PUN1YLR414C 792 nt12.97□□□□□ -0.33
SWF1Q04629 TIR1YER011W 765 nt12.96□□□□□ -0.33
SWF1Q04629 YJR018WYJR018W 363 nt12.91□□□□□ -0.34
SWF1Q04629 BSC6YOL137W 1494 nt12.83□□□□□ -0.36
SWF1Q04629 PTC2YER089C 1395 nt12.82□□□□□ -0.36
SWF1Q04629 SSA1YAL005C 1929 nt12.82□□□□□ -0.36
SWF1Q04629 BUD23YCR047C 828 nt12.78□□□□□ -0.36
SWF1Q04629 NAB2YGL122C 1578 nt12.69□□□□□ -0.38
SWF1Q04629 YJR120WYJR120W 351 nt12.68□□□□□ -0.38
SWF1Q04629 RPP2BYDR382W 333 nt12.62□□□□□ -0.39
SWF1Q04629 SRB2YHR041C 633 nt12.57□□□□□ -0.4
SWF1Q04629 SHU1YHL006C 453 nt12.52□□□□□ -0.41
SWF1Q04629 DAL1YIR027C 1383 nt12.49□□□□□ -0.41
SWF1Q04629 INM2YDR287W 879 nt12.47□□□□□ -0.41
SWF1Q04629 FIS1YIL065C 468 nt12.47□□□□□ -0.41
SWF1Q04629 YKL097CYKL097C 411 nt12.46□□□□□ -0.41
SWF1Q04629 FPR4YLR449W 1179 nt12.44□□□□□ -0.42
SWF1Q04629 WWM1YFL010C 636 nt12.37□□□□□ -0.43
SWF1Q04629 YAL037C-BYAL037C-B 975 nt12.37□□□□□ -0.43
SWF1Q04629 PHO4YFR034C 939 nt12.36□□□□□ -0.43
SWF1Q04629 BDH2YAL061W 1254 nt12.36□□□□□ -0.43
SWF1Q04629 SPT5YML010W 3192 nt12.33□□□□□ -0.44
SWF1Q04629 YBL100CYBL100C 315 nt12.32□□□□□ -0.44
SWF1Q04629 YGR021WYGR021W 873 nt12.27□□□□□ -0.45
SWF1Q04629 HOM6YJR139C 1080 nt12.22□□□□□ -0.45
SWF1Q04629 LSM3YLR438C-A 270 nt12.19□□□□□ -0.46
SWF1Q04629 FUN26YAL022C 1554 nt12.18□□□□□ -0.46
SWF1Q04629 YPS1YLR120C 1710 nt12.17□□□□□ -0.46
SWF1Q04629 YFL021C-AYFL021C-A 855 nt12.17□□□□□ -0.46
SWF1Q04629 TRM9YML014W 840 nt12.15□□□□□ -0.46
SWF1Q04629 MNP1YGL068W 585 nt12.13□□□□□ -0.47
SWF1Q04629 YDR095CYDR095C 411 nt12.07□□□□□ -0.48
SWF1Q04629 MEP2YNL142W 1500 nt12.06□□□□□ -0.48
SWF1Q04629 RKM5YLR137W 1104 nt12.04□□□□□ -0.48
SWF1Q04629 YHR165W-AYHR165W-A 312 nt12.03□□□□□ -0.48
SWF1Q04629 CCT6YDR188W 1641 nt12.03□□□□□ -0.48
SWF1Q04629 ALF1YNL148C 765 nt12.02□□□□□ -0.49
SWF1Q04629 YOR139CYOR139C 393 nt11.98□□□□□ -0.49
SWF1Q04629 SUF2tP(AGG)C 72 nt11.93□□□□□ -0.5
SWF1Q04629 SUF10tP(AGG)N 72 nt11.93□□□□□ -0.5
SWF1Q04629 NPL3YDR432W 1245 nt11.9□□□□□ -0.5
SWF1Q04629 YOL037CYOL037C 354 nt11.9□□□□□ -0.5
SWF1Q04629 SSA4YER103W 1929 nt11.89□□□□□ -0.51
SWF1Q04629 DCW1YKL046C 1350 nt11.87□□□□□ -0.51
SWF1Q04629 SIS1YNL007C 1059 nt11.86□□□□□ -0.51
SWF1Q04629 RPP2AYOL039W 321 nt11.86□□□□□ -0.51
SWF1Q04629 PTP1YDL230W 1008 nt11.81□□□□□ -0.52
SWF1Q04629 CAC2YML102W 1407 nt11.73□□□□□ -0.53
SWF1Q04629 EMI2YDR516C 1503 nt11.72□□□□□ -0.53
SWF1Q04629 ART5YGR068C 1761 nt11.67□□□□□ -0.54
Retrieved 100 of 7,029 protein–RNA pairs in 28.8 ms