Protein–RNA interactions for Protein: P00420

COX3, Cytochrome c oxidase subunit 3, yeastyeast

Predictions only

Length 269 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
COX3P00420 YML009W-BYML009W-B 477 nt20.2■□□□□ 0.82
COX3P00420 NOP1YDL014W 984 nt19.86■□□□□ 0.77
COX3P00420 NSR1YGR159C 1245 nt19.81■□□□□ 0.76
COX3P00420 YKL036CYKL036C 393 nt18.61■□□□□ 0.57
COX3P00420 Q0297Q0297 156 nt17.45■□□□□ 0.38
COX3P00420 YJL027CYJL027C 417 nt17.44■□□□□ 0.38
COX3P00420 SRX1YKL086W 384 nt17.31■□□□□ 0.36
COX3P00420 MDJ1YFL016C 1536 nt17.16■□□□□ 0.34
COX3P00420 SCS3YGL126W 1143 nt17.06■□□□□ 0.32
COX3P00420 YCR051WYCR051W 669 nt16.45■□□□□ 0.22
COX3P00420 YOL085CYOL085C 342 nt16.08■□□□□ 0.16
COX3P00420 PKP1YIL042C 1185 nt15.77■□□□□ 0.12
COX3P00420 RPP1BYDL130W 321 nt15.66■□□□□ 0.1
COX3P00420 SCJ1YMR214W 1134 nt15.66■□□□□ 0.1
COX3P00420 TRN1tP(UGG)A 72 nt15.41■□□□□ 0.06
COX3P00420 SUF9tP(UGG)F 72 nt15.41■□□□□ 0.06
COX3P00420 SUF8tP(UGG)H 72 nt15.41■□□□□ 0.06
COX3P00420 tP(UGG)LtP(UGG)L 72 nt15.41■□□□□ 0.06
COX3P00420 SUF7tP(UGG)M 72 nt15.41■□□□□ 0.06
COX3P00420 tP(UGG)N1tP(UGG)N1 72 nt15.41■□□□□ 0.06
COX3P00420 tP(UGG)N2tP(UGG)N2 72 nt15.41■□□□□ 0.06
COX3P00420 tP(UGG)O1tP(UGG)O1 72 nt15.41■□□□□ 0.06
COX3P00420 SUF11tP(UGG)O2 72 nt15.41■□□□□ 0.06
COX3P00420 ATS1YAL020C 1002 nt15.39■□□□□ 0.05
COX3P00420 DBP2YNL112W 1641 nt15.31■□□□□ 0.04
COX3P00420 CCC1YLR220W 969 nt15.26■□□□□ 0.03
COX3P00420 SCR1SCR1 522 nt14.91□□□□□ -0.02
COX3P00420 PET122YER153C 765 nt14.87□□□□□ -0.03
COX3P00420 tP(UGG)O3tP(UGG)O3 72 nt14.71□□□□□ -0.05
COX3P00420 RVS167YDR388W 1449 nt14.61□□□□□ -0.07
COX3P00420 YBR190WYBR190W 312 nt14.61□□□□□ -0.07
COX3P00420 RRN5YLR141W 1092 nt14.5□□□□□ -0.09
COX3P00420 RSB1YOR049C 1065 nt14.34□□□□□ -0.11
COX3P00420 RTC3YHR087W 336 nt14.31□□□□□ -0.12
COX3P00420 YDJ1YNL064C 1230 nt14.26□□□□□ -0.13
COX3P00420 YER088W-BYER088W-B 147 nt14.21□□□□□ -0.13
COX3P00420 PST2YDR032C 597 nt14.18□□□□□ -0.14
COX3P00420 SHR5YOL110W 714 nt14.14□□□□□ -0.15
COX3P00420 GAR1YHR089C 618 nt13.85□□□□□ -0.19
COX3P00420 YKL097CYKL097C 411 nt13.85□□□□□ -0.19
COX3P00420 DEP1YAL013W 1218 nt13.56□□□□□ -0.24
COX3P00420 URN1YPR152C 1398 nt13.5□□□□□ -0.25
COX3P00420 SHU1YHL006C 453 nt13.5□□□□□ -0.25
COX3P00420 RPN10YHR200W 807 nt13.46□□□□□ -0.25
COX3P00420 YNL208WYNL208W 600 nt13.46□□□□□ -0.25
COX3P00420 TIR1YER011W 765 nt13.37□□□□□ -0.27
COX3P00420 PUT4YOR348C 1884 nt13.31□□□□□ -0.28
COX3P00420 OPI9YLR338W 858 nt13.24□□□□□ -0.29
COX3P00420 YAL037C-BYAL037C-B 975 nt13.15□□□□□ -0.3
COX3P00420 YOR139CYOR139C 393 nt13.15□□□□□ -0.3
COX3P00420 SSA3YBL075C 1950 nt13.14□□□□□ -0.31
COX3P00420 SSA1YAL005C 1929 nt13.09□□□□□ -0.31
COX3P00420 NPL3YDR432W 1245 nt13.05□□□□□ -0.32
COX3P00420 SAH1YER043C 1350 nt13.03□□□□□ -0.32
COX3P00420 ARE1YCR048W 1833 nt12.97□□□□□ -0.33
COX3P00420 YGR021WYGR021W 873 nt12.93□□□□□ -0.34
COX3P00420 YJR018WYJR018W 363 nt12.92□□□□□ -0.34
COX3P00420 PUN1YLR414C 792 nt12.9□□□□□ -0.34
COX3P00420 POA1YBR022W 534 nt12.88□□□□□ -0.35
COX3P00420 SRB2YHR041C 633 nt12.86□□□□□ -0.35
COX3P00420 HOM6YJR139C 1080 nt12.84□□□□□ -0.35
COX3P00420 YHR049C-AYHR049C-A 297 nt12.83□□□□□ -0.36
COX3P00420 RPP2BYDR382W 333 nt12.82□□□□□ -0.36
COX3P00420 WWM1YFL010C 636 nt12.81□□□□□ -0.36
COX3P00420 YOL037CYOL037C 354 nt12.81□□□□□ -0.36
COX3P00420 MNP1YGL068W 585 nt12.79□□□□□ -0.36
COX3P00420 YJR120WYJR120W 351 nt12.7□□□□□ -0.38
COX3P00420 BSC6YOL137W 1494 nt12.66□□□□□ -0.38
COX3P00420 YFL021C-AYFL021C-A 855 nt12.66□□□□□ -0.38
COX3P00420 RKM5YLR137W 1104 nt12.66□□□□□ -0.38
COX3P00420 tM(CAU)CtM(CAU)C 72 nt12.64□□□□□ -0.39
COX3P00420 IMT4tM(CAU)E 72 nt12.64□□□□□ -0.39
COX3P00420 IMT3tM(CAU)J3 72 nt12.64□□□□□ -0.39
COX3P00420 IMT1tM(CAU)O1 72 nt12.64□□□□□ -0.39
COX3P00420 IMT2tM(CAU)P 72 nt12.64□□□□□ -0.39
COX3P00420 PTC2YER089C 1395 nt12.63□□□□□ -0.39
COX3P00420 BDH2YAL061W 1254 nt12.57□□□□□ -0.4
COX3P00420 BUD23YCR047C 828 nt12.52□□□□□ -0.41
COX3P00420 LSM3YLR438C-A 270 nt12.5□□□□□ -0.41
COX3P00420 INM2YDR287W 879 nt12.46□□□□□ -0.41
COX3P00420 YLR281CYLR281C 468 nt12.45□□□□□ -0.42
COX3P00420 NAB2YGL122C 1578 nt12.44□□□□□ -0.42
COX3P00420 PUS2YGL063W 1113 nt12.44□□□□□ -0.42
COX3P00420 YBL100CYBL100C 315 nt12.35□□□□□ -0.43
COX3P00420 WHI5YOR083W 888 nt12.35□□□□□ -0.43
COX3P00420 DAL1YIR027C 1383 nt12.34□□□□□ -0.43
COX3P00420 FPR4YLR449W 1179 nt12.32□□□□□ -0.44
COX3P00420 TRM9YML014W 840 nt12.3□□□□□ -0.44
COX3P00420 MOT3YMR070W 1473 nt12.29□□□□□ -0.44
COX3P00420 SPT5YML010W 3192 nt12.24□□□□□ -0.45
COX3P00420 FIS1YIL065C 468 nt12.23□□□□□ -0.45
COX3P00420 FUN26YAL022C 1554 nt12.21□□□□□ -0.46
COX3P00420 PHO4YFR034C 939 nt12.2□□□□□ -0.46
COX3P00420 IMP2'YIL154C 1041 nt12.17□□□□□ -0.46
COX3P00420 DSK2YMR276W 1122 nt12.15□□□□□ -0.46
COX3P00420 CCT6YDR188W 1641 nt12.12□□□□□ -0.47
COX3P00420 FMP45YDL222C 930 nt12.12□□□□□ -0.47
COX3P00420 YLR154C-GYLR154C-G 150 nt12.1□□□□□ -0.47
COX3P00420 SUF2tP(AGG)C 72 nt12.05□□□□□ -0.48
COX3P00420 SUF10tP(AGG)N 72 nt12.05□□□□□ -0.48
Retrieved 100 of 7,029 protein–RNA pairs in 63.4 ms