Protein–RNA interactions for Protein: P48561

TRF5, Poly(A) RNA polymerase protein 1, yeastyeast

Known RBP Predictions only

Length 642 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRF5P48561 YML009W-BYML009W-B 477 nt20.84■□□□□ 0.93
TRF5P48561 NSR1YGR159C 1245 nt20.73■□□□□ 0.91
TRF5P48561 NOP1YDL014W 984 nt20.27■□□□□ 0.84
TRF5P48561 YKL036CYKL036C 393 nt18.77■□□□□ 0.6
TRF5P48561 MDJ1YFL016C 1536 nt18.38■□□□□ 0.53
TRF5P48561 Q0297Q0297 156 nt17.83■□□□□ 0.44
TRF5P48561 SRX1YKL086W 384 nt17.76■□□□□ 0.43
TRF5P48561 YJL027CYJL027C 417 nt17.5■□□□□ 0.39
TRF5P48561 SCS3YGL126W 1143 nt17.12■□□□□ 0.33
TRF5P48561 YCR051WYCR051W 669 nt16.79■□□□□ 0.28
TRF5P48561 DBP2YNL112W 1641 nt16.34■□□□□ 0.21
TRF5P48561 YOL085CYOL085C 342 nt16.28■□□□□ 0.2
TRF5P48561 TRN1tP(UGG)A 72 nt16.07■□□□□ 0.16
TRF5P48561 SUF9tP(UGG)F 72 nt16.07■□□□□ 0.16
TRF5P48561 SUF8tP(UGG)H 72 nt16.07■□□□□ 0.16
TRF5P48561 tP(UGG)LtP(UGG)L 72 nt16.07■□□□□ 0.16
TRF5P48561 SUF7tP(UGG)M 72 nt16.07■□□□□ 0.16
TRF5P48561 tP(UGG)N1tP(UGG)N1 72 nt16.07■□□□□ 0.16
TRF5P48561 tP(UGG)N2tP(UGG)N2 72 nt16.07■□□□□ 0.16
TRF5P48561 tP(UGG)O1tP(UGG)O1 72 nt16.07■□□□□ 0.16
TRF5P48561 SUF11tP(UGG)O2 72 nt16.07■□□□□ 0.16
TRF5P48561 PKP1YIL042C 1185 nt15.99■□□□□ 0.15
TRF5P48561 RPP1BYDL130W 321 nt15.98■□□□□ 0.15
TRF5P48561 CCC1YLR220W 969 nt15.81■□□□□ 0.12
TRF5P48561 YBR190WYBR190W 312 nt15.67■□□□□ 0.1
TRF5P48561 ATS1YAL020C 1002 nt15.33■□□□□ 0.04
TRF5P48561 SCJ1YMR214W 1134 nt15.28■□□□□ 0.04
TRF5P48561 PET122YER153C 765 nt15.27■□□□□ 0.04
TRF5P48561 RVS167YDR388W 1449 nt15.25■□□□□ 0.03
TRF5P48561 RTC3YHR087W 336 nt15.24■□□□□ 0.03
TRF5P48561 tP(UGG)O3tP(UGG)O3 72 nt15.19■□□□□ 0.02
TRF5P48561 SCR1SCR1 522 nt15.04■□□□□ -0
TRF5P48561 RRN5YLR141W 1092 nt14.82□□□□□ -0.04
TRF5P48561 SHR5YOL110W 714 nt14.78□□□□□ -0.04
TRF5P48561 SSA3YBL075C 1950 nt14.76□□□□□ -0.05
TRF5P48561 YDJ1YNL064C 1230 nt14.71□□□□□ -0.05
TRF5P48561 YER088W-BYER088W-B 147 nt14.54□□□□□ -0.08
TRF5P48561 RSB1YOR049C 1065 nt14.48□□□□□ -0.09
TRF5P48561 URN1YPR152C 1398 nt14.33□□□□□ -0.12
TRF5P48561 PUT4YOR348C 1884 nt14.32□□□□□ -0.12
TRF5P48561 GAR1YHR089C 618 nt14.32□□□□□ -0.12
TRF5P48561 DEP1YAL013W 1218 nt14.31□□□□□ -0.12
TRF5P48561 PST2YDR032C 597 nt14.21□□□□□ -0.13
TRF5P48561 OPI9YLR338W 858 nt14.15□□□□□ -0.14
TRF5P48561 YNL208WYNL208W 600 nt14.12□□□□□ -0.15
TRF5P48561 RPN10YHR200W 807 nt14.09□□□□□ -0.15
TRF5P48561 SAH1YER043C 1350 nt14.02□□□□□ -0.17
TRF5P48561 ARE1YCR048W 1833 nt13.99□□□□□ -0.17
TRF5P48561 TIR1YER011W 765 nt13.86□□□□□ -0.19
TRF5P48561 POA1YBR022W 534 nt13.84□□□□□ -0.19
TRF5P48561 YHR049C-AYHR049C-A 297 nt13.78□□□□□ -0.2
TRF5P48561 SSA1YAL005C 1929 nt13.72□□□□□ -0.21
TRF5P48561 PUN1YLR414C 792 nt13.71□□□□□ -0.21
TRF5P48561 YJR018WYJR018W 363 nt13.67□□□□□ -0.22
TRF5P48561 BSC6YOL137W 1494 nt13.63□□□□□ -0.23
TRF5P48561 SHU1YHL006C 453 nt13.61□□□□□ -0.23
TRF5P48561 YKL097CYKL097C 411 nt13.61□□□□□ -0.23
TRF5P48561 YJR120WYJR120W 351 nt13.58□□□□□ -0.24
TRF5P48561 SRB2YHR041C 633 nt13.56□□□□□ -0.24
TRF5P48561 PTC2YER089C 1395 nt13.53□□□□□ -0.24
TRF5P48561 BUD23YCR047C 828 nt13.43□□□□□ -0.26
TRF5P48561 RPP2BYDR382W 333 nt13.36□□□□□ -0.27
TRF5P48561 YAL037C-BYAL037C-B 975 nt13.36□□□□□ -0.27
TRF5P48561 NAB2YGL122C 1578 nt13.35□□□□□ -0.27
TRF5P48561 WWM1YFL010C 636 nt13.27□□□□□ -0.29
TRF5P48561 SPT5YML010W 3192 nt13.23□□□□□ -0.29
TRF5P48561 FIS1YIL065C 468 nt13.23□□□□□ -0.29
TRF5P48561 DAL1YIR027C 1383 nt13.2□□□□□ -0.3
TRF5P48561 YGR021WYGR021W 873 nt13.19□□□□□ -0.3
TRF5P48561 HOM6YJR139C 1080 nt13.19□□□□□ -0.3
TRF5P48561 INM2YDR287W 879 nt13.18□□□□□ -0.3
TRF5P48561 BDH2YAL061W 1254 nt13.16□□□□□ -0.3
TRF5P48561 YOR139CYOR139C 393 nt13.13□□□□□ -0.31
TRF5P48561 MNP1YGL068W 585 nt13.11□□□□□ -0.31
TRF5P48561 FPR4YLR449W 1179 nt13.09□□□□□ -0.31
TRF5P48561 PHO4YFR034C 939 nt13.08□□□□□ -0.32
TRF5P48561 YFL021C-AYFL021C-A 855 nt13.06□□□□□ -0.32
TRF5P48561 YBL100CYBL100C 315 nt13.06□□□□□ -0.32
TRF5P48561 LSM3YLR438C-A 270 nt13□□□□□ -0.33
TRF5P48561 SSA4YER103W 1929 nt12.99□□□□□ -0.33
TRF5P48561 RKM5YLR137W 1104 nt12.98□□□□□ -0.33
TRF5P48561 NPL3YDR432W 1245 nt12.92□□□□□ -0.34
TRF5P48561 FUN26YAL022C 1554 nt12.92□□□□□ -0.34
TRF5P48561 YOL037CYOL037C 354 nt12.9□□□□□ -0.34
TRF5P48561 TRM9YML014W 840 nt12.86□□□□□ -0.35
TRF5P48561 MEP2YNL142W 1500 nt12.84□□□□□ -0.35
TRF5P48561 YPS1YLR120C 1710 nt12.82□□□□□ -0.36
TRF5P48561 CCT6YDR188W 1641 nt12.8□□□□□ -0.36
TRF5P48561 YDR095CYDR095C 411 nt12.76□□□□□ -0.37
TRF5P48561 YHR165W-AYHR165W-A 312 nt12.66□□□□□ -0.38
TRF5P48561 ALF1YNL148C 765 nt12.66□□□□□ -0.38
TRF5P48561 SUF2tP(AGG)C 72 nt12.62□□□□□ -0.39
TRF5P48561 SUF10tP(AGG)N 72 nt12.62□□□□□ -0.39
TRF5P48561 YLR281CYLR281C 468 nt12.62□□□□□ -0.39
TRF5P48561 DCW1YKL046C 1350 nt12.6□□□□□ -0.39
TRF5P48561 tM(CAU)CtM(CAU)C 72 nt12.6□□□□□ -0.39
TRF5P48561 IMT4tM(CAU)E 72 nt12.6□□□□□ -0.39
TRF5P48561 IMT3tM(CAU)J3 72 nt12.6□□□□□ -0.39
TRF5P48561 IMT1tM(CAU)O1 72 nt12.6□□□□□ -0.39
TRF5P48561 IMT2tM(CAU)P 72 nt12.6□□□□□ -0.39
Retrieved 100 of 7,029 protein–RNA pairs in 31.6 ms