Protein–RNA interactions for Protein: P38360

PCA1, P-type cation-transporting ATPase, yeastyeast

Predictions only

Length 1,216 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PCA1P38360 YML009W-BYML009W-B 477 nt21.22■□□□□ 0.99
PCA1P38360 NSR1YGR159C 1245 nt21.19■□□□□ 0.98
PCA1P38360 NOP1YDL014W 984 nt20.54■□□□□ 0.88
PCA1P38360 MDJ1YFL016C 1536 nt19.03■□□□□ 0.64
PCA1P38360 YKL036CYKL036C 393 nt18.78■□□□□ 0.6
PCA1P38360 SRX1YKL086W 384 nt17.93■□□□□ 0.46
PCA1P38360 Q0297Q0297 156 nt17.9■□□□□ 0.46
PCA1P38360 YJL027CYJL027C 417 nt17.54■□□□□ 0.4
PCA1P38360 YCR051WYCR051W 669 nt17.03■□□□□ 0.32
PCA1P38360 SCS3YGL126W 1143 nt17.01■□□□□ 0.31
PCA1P38360 DBP2YNL112W 1641 nt16.73■□□□□ 0.27
PCA1P38360 TRN1tP(UGG)A 72 nt16.33■□□□□ 0.2
PCA1P38360 SUF9tP(UGG)F 72 nt16.33■□□□□ 0.2
PCA1P38360 SUF8tP(UGG)H 72 nt16.33■□□□□ 0.2
PCA1P38360 tP(UGG)LtP(UGG)L 72 nt16.33■□□□□ 0.2
PCA1P38360 SUF7tP(UGG)M 72 nt16.33■□□□□ 0.2
PCA1P38360 tP(UGG)N1tP(UGG)N1 72 nt16.33■□□□□ 0.2
PCA1P38360 tP(UGG)N2tP(UGG)N2 72 nt16.33■□□□□ 0.2
PCA1P38360 tP(UGG)O1tP(UGG)O1 72 nt16.33■□□□□ 0.2
PCA1P38360 SUF11tP(UGG)O2 72 nt16.33■□□□□ 0.2
PCA1P38360 YOL085CYOL085C 342 nt16.27■□□□□ 0.2
PCA1P38360 YBR190WYBR190W 312 nt16.24■□□□□ 0.19
PCA1P38360 CCC1YLR220W 969 nt16.18■□□□□ 0.18
PCA1P38360 RPP1BYDL130W 321 nt16.08■□□□□ 0.16
PCA1P38360 PKP1YIL042C 1185 nt16.07■□□□□ 0.16
PCA1P38360 RTC3YHR087W 336 nt15.9■□□□□ 0.14
PCA1P38360 RVS167YDR388W 1449 nt15.73■□□□□ 0.11
PCA1P38360 SCJ1YMR214W 1134 nt15.61■□□□□ 0.09
PCA1P38360 PET122YER153C 765 nt15.39■□□□□ 0.05
PCA1P38360 tP(UGG)O3tP(UGG)O3 72 nt15.38■□□□□ 0.05
PCA1P38360 ATS1YAL020C 1002 nt15.19■□□□□ 0.02
PCA1P38360 SCR1SCR1 522 nt15.19■□□□□ 0.02
PCA1P38360 SHR5YOL110W 714 nt15.12■□□□□ 0.01
PCA1P38360 RRN5YLR141W 1092 nt14.91□□□□□ -0.02
PCA1P38360 PUT4YOR348C 1884 nt14.88□□□□□ -0.03
PCA1P38360 YDJ1YNL064C 1230 nt14.87□□□□□ -0.03
PCA1P38360 URN1YPR152C 1398 nt14.82□□□□□ -0.04
PCA1P38360 DEP1YAL013W 1218 nt14.77□□□□□ -0.05
PCA1P38360 YER088W-BYER088W-B 147 nt14.62□□□□□ -0.07
PCA1P38360 OPI9YLR338W 858 nt14.62□□□□□ -0.07
PCA1P38360 GAR1YHR089C 618 nt14.59□□□□□ -0.07
PCA1P38360 RSB1YOR049C 1065 nt14.58□□□□□ -0.08
PCA1P38360 SAH1YER043C 1350 nt14.58□□□□□ -0.08
PCA1P38360 RPN10YHR200W 807 nt14.56□□□□□ -0.08
PCA1P38360 ARE1YCR048W 1833 nt14.56□□□□□ -0.08
PCA1P38360 YNL208WYNL208W 600 nt14.5□□□□□ -0.09
PCA1P38360 YHR049C-AYHR049C-A 297 nt14.4□□□□□ -0.1
PCA1P38360 POA1YBR022W 534 nt14.4□□□□□ -0.1
PCA1P38360 SSA3YBL075C 1950 nt14.24□□□□□ -0.13
PCA1P38360 PUN1YLR414C 792 nt14.2□□□□□ -0.14
PCA1P38360 BSC6YOL137W 1494 nt14.13□□□□□ -0.15
PCA1P38360 TIR1YER011W 765 nt14.11□□□□□ -0.15
PCA1P38360 YJR018WYJR018W 363 nt14.11□□□□□ -0.15
PCA1P38360 PST2YDR032C 597 nt14.09□□□□□ -0.15
PCA1P38360 BUD23YCR047C 828 nt14.06□□□□□ -0.16
PCA1P38360 PTC2YER089C 1395 nt14.06□□□□□ -0.16
PCA1P38360 SSA1YAL005C 1929 nt13.97□□□□□ -0.17
PCA1P38360 NAB2YGL122C 1578 nt13.89□□□□□ -0.19
PCA1P38360 YJR120WYJR120W 351 nt13.85□□□□□ -0.19
PCA1P38360 RPP2BYDR382W 333 nt13.8□□□□□ -0.2
PCA1P38360 SRB2YHR041C 633 nt13.7□□□□□ -0.22
PCA1P38360 FIS1YIL065C 468 nt13.7□□□□□ -0.22
PCA1P38360 DAL1YIR027C 1383 nt13.69□□□□□ -0.22
PCA1P38360 FPR4YLR449W 1179 nt13.68□□□□□ -0.22
PCA1P38360 INM2YDR287W 879 nt13.61□□□□□ -0.23
PCA1P38360 PHO4YFR034C 939 nt13.57□□□□□ -0.24
PCA1P38360 SHU1YHL006C 453 nt13.54□□□□□ -0.24
PCA1P38360 SPT5YML010W 3192 nt13.53□□□□□ -0.24
PCA1P38360 YKL097CYKL097C 411 nt13.49□□□□□ -0.25
PCA1P38360 YBL100CYBL100C 315 nt13.49□□□□□ -0.25
PCA1P38360 BDH2YAL061W 1254 nt13.47□□□□□ -0.25
PCA1P38360 WWM1YFL010C 636 nt13.46□□□□□ -0.25
PCA1P38360 YAL037C-BYAL037C-B 975 nt13.39□□□□□ -0.27
PCA1P38360 YPS1YLR120C 1710 nt13.35□□□□□ -0.27
PCA1P38360 YGR021WYGR021W 873 nt13.34□□□□□ -0.27
PCA1P38360 FUN26YAL022C 1554 nt13.32□□□□□ -0.28
PCA1P38360 MEP2YNL142W 1500 nt13.27□□□□□ -0.29
PCA1P38360 HOM6YJR139C 1080 nt13.26□□□□□ -0.29
PCA1P38360 LSM3YLR438C-A 270 nt13.25□□□□□ -0.29
PCA1P38360 TRM9YML014W 840 nt13.25□□□□□ -0.29
PCA1P38360 YFL021C-AYFL021C-A 855 nt13.24□□□□□ -0.29
PCA1P38360 YDR095CYDR095C 411 nt13.23□□□□□ -0.29
PCA1P38360 YHR165W-AYHR165W-A 312 nt13.23□□□□□ -0.29
PCA1P38360 MNP1YGL068W 585 nt13.21□□□□□ -0.29
PCA1P38360 ALF1YNL148C 765 nt13.17□□□□□ -0.3
PCA1P38360 SSA4YER103W 1929 nt13.15□□□□□ -0.3
PCA1P38360 CCT6YDR188W 1641 nt13.13□□□□□ -0.31
PCA1P38360 RKM5YLR137W 1104 nt13.08□□□□□ -0.32
PCA1P38360 DCW1YKL046C 1350 nt13.07□□□□□ -0.32
PCA1P38360 SUF2tP(AGG)C 72 nt13.04□□□□□ -0.32
PCA1P38360 SUF10tP(AGG)N 72 nt13.04□□□□□ -0.32
PCA1P38360 RPP2AYOL039W 321 nt12.99□□□□□ -0.33
PCA1P38360 YOR139CYOR139C 393 nt12.97□□□□□ -0.33
PCA1P38360 SIS1YNL007C 1059 nt12.94□□□□□ -0.34
PCA1P38360 PTP1YDL230W 1008 nt12.93□□□□□ -0.34
PCA1P38360 YOL037CYOL037C 354 nt12.91□□□□□ -0.34
PCA1P38360 EMI2YDR516C 1503 nt12.9□□□□□ -0.34
PCA1P38360 NPL3YDR432W 1245 nt12.87□□□□□ -0.35
PCA1P38360 CAC2YML102W 1407 nt12.87□□□□□ -0.35
PCA1P38360 YMR090WYMR090W 684 nt12.83□□□□□ -0.36
Retrieved 100 of 7,029 protein–RNA pairs in 26.8 ms