RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C MLC2Q06580 163 aa2.32□□□□□ -2.04
VPS13YLL040C COS7Q07788 383 aa2.32□□□□□ -2.04
VPS13YLL040C TGL5Q12043 749 aa2.32□□□□□ -2.04
VPS13YLL040C LDB17Q12342 491 aa2.32□□□□□ -2.04
VPS13YLL040C STE3P06783 470 aa2.32□□□□□ -2.04
VPS13YLL040C RPB4P20433 221 aaPredicted RBP2.32□□□□□ -2.04
VPS13YLL040C PHO11P35842 467 aa2.32□□□□□ -2.04
VPS13YLL040C YKL151CP36059 337 aa2.32□□□□□ -2.04
VPS13YLL040C MRPL3P36516 390 aa2.32□□□□□ -2.04
VPS13YLL040C PHO12P38693 467 aa2.32□□□□□ -2.04
VPS13YLL040C RPT2P40327 437 aaKnown RBP2.32□□□□□ -2.04
VPS13YLL040C FKH2P41813 862 aa2.32□□□□□ -2.04
VPS13YLL040C FET5P43561 622 aa2.32□□□□□ -2.04
VPS13YLL040C NUP100Q02629 959 aa2.32□□□□□ -2.04
VPS13YLL040C APM4Q99186 491 aa2.32□□□□□ -2.04
VPS13YLL040C MTF1P14908 341 aaKnown RBP2.32□□□□□ -2.04
VPS13YLL040C SKT5P34226 696 aa2.32□□□□□ -2.04
VPS13YLL040C YHI9P38765 294 aa2.32□□□□□ -2.04
VPS13YLL040C FAD1P38913 306 aa2.32□□□□□ -2.04
VPS13YLL040C MPT5P39016 859 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
VPS13YLL040C ESL1P40456 1118 aa2.32□□□□□ -2.04
VPS13YLL040C ALT1P52893 592 aa2.32□□□□□ -2.04
VPS13YLL040C LSM3P57743 89 aaKnown RBP2.32□□□□□ -2.04
VPS13YLL040C ARP9Q05123 467 aa2.32□□□□□ -2.04
VPS13YLL040C ASA1Q06822 443 aa2.32□□□□□ -2.04
VPS13YLL040C YPD1Q07688 167 aa2.32□□□□□ -2.04
VPS13YLL040C YLL058WQ12198 575 aa2.32□□□□□ -2.04
VPS13YLL040C CMC2Q3E7A4 109 aa2.32□□□□□ -2.04
VPS13YLL040C MOT1P32333 1867 aa2.32□□□□□ -2.04
VPS13YLL040C PHO80P20052 293 aa2.32□□□□□ -2.04
VPS13YLL040C RVS161P25343 265 aaKnown RBP2.32□□□□□ -2.04
VPS13YLL040C TKL2P33315 681 aa2.32□□□□□ -2.04
VPS13YLL040C EMP65P40085 556 aa2.32□□□□□ -2.04
VPS13YLL040C DAM1P53267 343 aa2.32□□□□□ -2.04
VPS13YLL040C ATF2P53296 535 aa2.32□□□□□ -2.04
VPS13YLL040C CPR8P53728 308 aa2.32□□□□□ -2.04
VPS13YLL040C SPO71Q03868 1245 aa2.32□□□□□ -2.04
VPS13YLL040C YEH2Q07950 538 aa2.32□□□□□ -2.04
VPS13YLL040C FLC1Q08967 793 aa2.32□□□□□ -2.04
VPS13YLL040C YLR358CO13565 187 aa2.31□□□□□ -2.04
VPS13YLL040C TY2A-LR1P0C2J4 438 aa2.31□□□□□ -2.04
VPS13YLL040C TY2A-FP0CX61 438 aa2.31□□□□□ -2.04
VPS13YLL040C TY2A-GR2P0CX62 438 aa2.31□□□□□ -2.04
VPS13YLL040C HSP26P15992 214 aaKnown RBP RIP-Chip data2.31□□□□□ -2.04 RIP-Chip
VPS13YLL040C VMA2P16140 517 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C DBP2P24783 546 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C RSA4P25382 515 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C TY2A-CP25383 438 aa2.31□□□□□ -2.04
VPS13YLL040C NDI1P32340 513 aa2.31□□□□□ -2.04
VPS13YLL040C YBR242WP38331 238 aa2.31□□□□□ -2.04
VPS13YLL040C SBE22P38814 852 aa2.31□□□□□ -2.04
VPS13YLL040C GAT1P43574 510 aa2.31□□□□□ -2.04
VPS13YLL040C RSC4Q02206 625 aa2.31□□□□□ -2.04
VPS13YLL040C TY2A-DR2Q03483 438 aa2.31□□□□□ -2.04
VPS13YLL040C YDR131CQ03899 556 aa2.31□□□□□ -2.04
VPS13YLL040C OPT2Q06593 877 aa2.31□□□□□ -2.04
VPS13YLL040C MLH3Q12083 715 aa2.31□□□□□ -2.04
VPS13YLL040C YPR063CQ12160 140 aa2.31□□□□□ -2.04
VPS13YLL040C TY2A-BQ12260 438 aa2.31□□□□□ -2.04
VPS13YLL040C TY2A-OR2Q12293 438 aa2.31□□□□□ -2.04
VPS13YLL040C TY2A-DR1Q12392 438 aa2.31□□□□□ -2.04
VPS13YLL040C TY2A-OR1Q12439 438 aa2.31□□□□□ -2.04
VPS13YLL040C YMR030W-AQ3E760 96 aa2.31□□□□□ -2.04
VPS13YLL040C TY2A-DR3Q99303 438 aa2.31□□□□□ -2.04
VPS13YLL040C RPL24AP04449 155 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C PUT1P09368 476 aa2.31□□□□□ -2.04
VPS13YLL040C SSA1P10591 642 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C IDP1P21954 428 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C TRR1P29509 319 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C MOT2P34909 587 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C RPL13BP40212 199 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C GYP8P43570 497 aa2.31□□□□□ -2.04
VPS13YLL040C YNL134CP53912 376 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C TRM12Q04235 462 aa2.31□□□□□ -2.04
VPS13YLL040C DUS3Q06053 668 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C RRP9Q06506 573 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C SDO1Q07953 250 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C NMD4Q12129 218 aa2.31□□□□□ -2.04
VPS13YLL040C NBP2Q12163 236 aa2.31□□□□□ -2.04
VPS13YLL040C YOR131CQ12486 218 aa2.31□□□□□ -2.04
VPS13YLL040C RPL13AQ12690 199 aaPredicted RBP2.31□□□□□ -2.04
VPS13YLL040C ARE1P25628 610 aa2.31□□□□□ -2.04
VPS13YLL040C PTM1P32857 523 aa2.31□□□□□ -2.04
VPS13YLL040C YBR137WP38276 179 aa2.31□□□□□ -2.04
VPS13YLL040C KHA1P40309 873 aa2.31□□□□□ -2.04
VPS13YLL040C AVT1P47082 602 aa2.31□□□□□ -2.04
VPS13YLL040C YGR053CP53234 283 aa2.31□□□□□ -2.04
VPS13YLL040C ARP4P80428 489 aa2.31□□□□□ -2.04
VPS13YLL040C YML083CQ04526 418 aa2.31□□□□□ -2.04
VPS13YLL040C BRR1Q99177 341 aaPredicted RBP2.31□□□□□ -2.04
VPS13YLL040C LDB7P38210 180 aa2.31□□□□□ -2.04
VPS13YLL040C SRP68P38687 599 aaKnown RBP2.31□□□□□ -2.04
VPS13YLL040C AVT6P40074 448 aa2.31□□□□□ -2.04
VPS13YLL040C MPM1P40364 252 aa2.31□□□□□ -2.04
VPS13YLL040C SSU1P41930 458 aa2.31□□□□□ -2.04
VPS13YLL040C GCV2P49095 1034 aa2.31□□□□□ -2.04
VPS13YLL040C HOL1P53389 586 aa2.31□□□□□ -2.04
VPS13YLL040C BSC1Q12140 328 aa2.31□□□□□ -2.04
VPS13YLL040C SVS1Q12254 260 aa2.31□□□□□ -2.04
VPS13YLL040C Q0010Q9ZZX9 128 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 18.1 ms