RNA–Protein interactions for RNA: YLL040C

VPS13, Transcript of Protein involved in prospore membrane morphogenesis, yeastyeast

Gene VPS13, Length 9,435 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
VPS13YLL040C INO80P53115 1489 aa4.35□□□□□ -1.71
VPS13YLL040C SPA2P23201 1466 aaKnown RBP4.31□□□□□ -1.72
VPS13YLL040C SGS1P35187 1447 aa4.17□□□□□ -1.74
VPS13YLL040C SSN2P38931 1420 aa4.1□□□□□ -1.75
VPS13YLL040C TCB3Q03640 1545 aaKnown RBP4.09□□□□□ -1.76
VPS13YLL040C SKI3P17883 1432 aaKnown RBP4.04□□□□□ -1.76
VPS13YLL040C CHD1P32657 1468 aa4.02□□□□□ -1.77
VPS13YLL040C SPT6P23615 1451 aaKnown RBP3.95□□□□□ -1.78
VPS13YLL040C TY1B-DR4Q07793 1604 aa3.94□□□□□ -1.78
VPS13YLL040C SIN3P22579 1536 aa3.92□□□□□ -1.78
VPS13YLL040C XRN1P22147 1528 aaKnown RBP3.88□□□□□ -1.79
VPS13YLL040C HSL1P34244 1518 aa3.85□□□□□ -1.79
VPS13YLL040C DRS1P32892 752 aaKnown RBP3.81□□□□□ -1.8
VPS13YLL040C ECM5Q03214 1411 aa3.78□□□□□ -1.8
VPS13YLL040C MON2P48563 1636 aaPredicted RBP3.78□□□□□ -1.81
VPS13YLL040C THO2P53552 1597 aaKnown RBP3.76□□□□□ -1.81
VPS13YLL040C RSE1Q04693 1361 aaKnown RBP3.76□□□□□ -1.81
VPS13YLL040C SSK2P53599 1579 aa3.76□□□□□ -1.81
VPS13YLL040C MMS22Q06164 1454 aa3.75□□□□□ -1.81
VPS13YLL040C POL1P13382 1468 aa3.75□□□□□ -1.81
VPS13YLL040C MYO4P32492 1471 aa3.75□□□□□ -1.81
VPS13YLL040C HIR3P47171 1648 aa3.74□□□□□ -1.81
VPS13YLL040C REV3P14284 1504 aa3.74□□□□□ -1.81
VPS13YLL040C YPK9Q12697 1472 aa3.73□□□□□ -1.81
VPS13YLL040C NUP170P38181 1502 aa3.73□□□□□ -1.81
VPS13YLL040C MYO2P19524 1574 aaKnown RBP3.72□□□□□ -1.81
VPS13YLL040C YTA7P40340 1379 aa3.72□□□□□ -1.81
VPS13YLL040C SWR1Q05471 1514 aa3.7□□□□□ -1.82
VPS13YLL040C STU1P38198 1513 aa3.69□□□□□ -1.82
VPS13YLL040C SMC4Q12267 1418 aa3.68□□□□□ -1.82
VPS13YLL040C DNA2P38859 1522 aa3.67□□□□□ -1.82
VPS13YLL040C RPO31P04051 1460 aa3.67□□□□□ -1.82
VPS13YLL040C SPP41P38904 1435 aa3.67□□□□□ -1.82
VPS13YLL040C UFD4P33202 1483 aa3.66□□□□□ -1.82
VPS13YLL040C BUD4P47136 1447 aa3.65□□□□□ -1.83
VPS13YLL040C PDR10P51533 1564 aa3.64□□□□□ -1.83
VPS13YLL040C YOR1P53049 1477 aa3.64□□□□□ -1.83
VPS13YLL040C TAF2P23255 1407 aa3.63□□□□□ -1.83
VPS13YLL040C ESP1Q03018 1630 aa3.62□□□□□ -1.83
VPS13YLL040C TOP2P06786 1428 aaKnown RBP3.61□□□□□ -1.83
VPS13YLL040C TAF7Q05021 590 aa3.61□□□□□ -1.83
VPS13YLL040C PDR5P33302 1511 aaKnown RBP3.6□□□□□ -1.83
VPS13YLL040C PEP1P32319 1579 aa3.6□□□□□ -1.83
VPS13YLL040C SCC2Q04002 1493 aa3.6□□□□□ -1.83
VPS13YLL040C ATG2P53855 1592 aa3.58□□□□□ -1.84
VPS13YLL040C IKI3Q06706 1349 aaKnown RBP3.58□□□□□ -1.84
VPS13YLL040C YCF1P39109 1515 aaKnown RBP3.57□□□□□ -1.84
VPS13YLL040C KOG1P38873 1557 aa3.57□□□□□ -1.84
VPS13YLL040C IQG1Q12280 1495 aa3.55□□□□□ -1.84
VPS13YLL040C SNT2P53127 1403 aa3.54□□□□□ -1.84
VPS13YLL040C TRM732Q03496 1420 aa3.53□□□□□ -1.84
VPS13YLL040C SNQ2P32568 1501 aaKnown RBP3.53□□□□□ -1.84
VPS13YLL040C RKR1Q04781 1562 aa3.52□□□□□ -1.85
VPS13YLL040C MDS3P53094 1487 aa3.51□□□□□ -1.85
VPS13YLL040C CAT8P39113 1433 aa3.5□□□□□ -1.85
VPS13YLL040C IOC4Q04213 475 aa3.49□□□□□ -1.85
VPS13YLL040C CDC25P04821 1589 aa3.48□□□□□ -1.85
VPS13YLL040C STH1P32597 1359 aa3.48□□□□□ -1.85
VPS13YLL040C PDR12Q02785 1511 aa3.47□□□□□ -1.85
VPS13YLL040C IRC20Q06554 1556 aa3.47□□□□□ -1.85
VPS13YLL040C HAP1P0CE41 1502 aa3.46□□□□□ -1.86
VPS13YLL040C GEA1P47102 1408 aaPredicted RBP3.46□□□□□ -1.86
VPS13YLL040C TSC11P40061 1430 aa3.46□□□□□ -1.86
VPS13YLL040C SEC3P33332 1336 aaKnown RBP3.46□□□□□ -1.86
VPS13YLL040C GEA2P39993 1459 aaKnown RBP3.45□□□□□ -1.86
VPS13YLL040C TFA1P36100 482 aa3.44□□□□□ -1.86
VPS13YLL040C MLP2P40457 1679 aa3.44□□□□□ -1.86
VPS13YLL040C MMS1Q06211 1407 aa3.43□□□□□ -1.86
VPS13YLL040C BPT1P14772 1559 aa3.43□□□□□ -1.86
VPS13YLL040C NUP159P40477 1460 aa3.43□□□□□ -1.86
VPS13YLL040C VTH1P40438 1549 aa3.42□□□□□ -1.86
VPS13YLL040C VTH2P40890 1549 aa3.42□□□□□ -1.86
VPS13YLL040C ULS1Q08562 1619 aa3.42□□□□□ -1.86
VPS13YLL040C TY3B-GQ99315 1547 aa3.41□□□□□ -1.86
VPS13YLL040C SCT1P32784 759 aa3.4□□□□□ -1.86
VPS13YLL040C SRB8P25648 1427 aa3.4□□□□□ -1.87
VPS13YLL040C PAN1P32521 1480 aa3.4□□□□□ -1.87
VPS13YLL040C PDR15Q04182 1529 aaKnown RBP3.4□□□□□ -1.87
VPS13YLL040C YLR419WQ06698 1435 aaKnown RBP3.39□□□□□ -1.87
VPS13YLL040C ESC1Q03661 1658 aaKnown RBP3.39□□□□□ -1.87
VPS13YLL040C VPS15P22219 1454 aa3.39□□□□□ -1.87
VPS13YLL040C TY3B-IQ7LHG5 1498 aaKnown RBP3.38□□□□□ -1.87
VPS13YLL040C TY1B-DR3Q99231 1755 aa3.38□□□□□ -1.87
VPS13YLL040C GCN2P15442 1659 aa3.38□□□□□ -1.87
VPS13YLL040C ENP1P38333 483 aaKnown RBP3.37□□□□□ -1.87
VPS13YLL040C TY2B-LR1P0C2J3 1770 aa3.36□□□□□ -1.87
VPS13YLL040C TY2B-FP0CX63 1770 aa3.36□□□□□ -1.87
VPS13YLL040C TY2B-GR2P0CX64 1770 aa3.36□□□□□ -1.87
VPS13YLL040C TY2B-CP25384 1770 aa3.36□□□□□ -1.87
VPS13YLL040C TY2B-DR2Q03494 1770 aa3.36□□□□□ -1.87
VPS13YLL040C TY1B-DR1Q03855 1755 aa3.36□□□□□ -1.87
VPS13YLL040C TY2B-DR3Q07791 1770 aaKnown RBP3.36□□□□□ -1.87
VPS13YLL040C TY2B-OR1Q12113 1770 aa3.36□□□□□ -1.87
VPS13YLL040C TY2B-DR1Q12472 1770 aa3.36□□□□□ -1.87
VPS13YLL040C TY2B-OR2Q12501 1770 aa3.36□□□□□ -1.87
VPS13YLL040C TY1B-HO13535 1793 aa3.35□□□□□ -1.87
VPS13YLL040C TY1B-DR5P0C2I2 1755 aa3.35□□□□□ -1.87
VPS13YLL040C TY1B-DR6P0C2I3 1755 aa3.35□□□□□ -1.87
VPS13YLL040C TY1B-LR2P0C2I5 1755 aa3.35□□□□□ -1.87
VPS13YLL040C TY1B-LR3P0C2I6 1755 aaKnown RBP3.35□□□□□ -1.87
Retrieved 100 of 5,963 RNA–protein pairs in 14.6 ms