Protein–RNA interactions for Protein: Q02629

NUP100, Nucleoporin NUP100/NSP100, yeastyeast

Predictions only

Length 959 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
NUP100Q02629 YML009W-BYML009W-B 477 nt20.63■□□□□ 0.89
NUP100Q02629 NSR1YGR159C 1245 nt20.51■□□□□ 0.87
NUP100Q02629 NOP1YDL014W 984 nt20.01■□□□□ 0.79
NUP100Q02629 YKL036CYKL036C 393 nt18.46■□□□□ 0.55
NUP100Q02629 MDJ1YFL016C 1536 nt18.27■□□□□ 0.51
NUP100Q02629 Q0297Q0297 156 nt17.52■□□□□ 0.4
NUP100Q02629 SRX1YKL086W 384 nt17.51■□□□□ 0.39
NUP100Q02629 YJL027CYJL027C 417 nt17.23■□□□□ 0.35
NUP100Q02629 SCS3YGL126W 1143 nt16.8■□□□□ 0.28
NUP100Q02629 YCR051WYCR051W 669 nt16.62■□□□□ 0.25
NUP100Q02629 DBP2YNL112W 1641 nt16.15■□□□□ 0.18
NUP100Q02629 YOL085CYOL085C 342 nt16■□□□□ 0.15
NUP100Q02629 TRN1tP(UGG)A 72 nt15.85■□□□□ 0.13
NUP100Q02629 SUF9tP(UGG)F 72 nt15.85■□□□□ 0.13
NUP100Q02629 SUF8tP(UGG)H 72 nt15.85■□□□□ 0.13
NUP100Q02629 tP(UGG)LtP(UGG)L 72 nt15.85■□□□□ 0.13
NUP100Q02629 SUF7tP(UGG)M 72 nt15.85■□□□□ 0.13
NUP100Q02629 tP(UGG)N1tP(UGG)N1 72 nt15.85■□□□□ 0.13
NUP100Q02629 tP(UGG)N2tP(UGG)N2 72 nt15.85■□□□□ 0.13
NUP100Q02629 tP(UGG)O1tP(UGG)O1 72 nt15.85■□□□□ 0.13
NUP100Q02629 SUF11tP(UGG)O2 72 nt15.85■□□□□ 0.13
NUP100Q02629 PKP1YIL042C 1185 nt15.79■□□□□ 0.12
NUP100Q02629 RPP1BYDL130W 321 nt15.73■□□□□ 0.11
NUP100Q02629 CCC1YLR220W 969 nt15.71■□□□□ 0.11
NUP100Q02629 YBR190WYBR190W 312 nt15.55■□□□□ 0.08
NUP100Q02629 RTC3YHR087W 336 nt15.23■□□□□ 0.03
NUP100Q02629 RVS167YDR388W 1449 nt15.13■□□□□ 0.01
NUP100Q02629 SCJ1YMR214W 1134 nt15.1■□□□□ 0.01
NUP100Q02629 PET122YER153C 765 nt15.05■□□□□ -0
NUP100Q02629 ATS1YAL020C 1002 nt15.01□□□□□ -0.01
NUP100Q02629 tP(UGG)O3tP(UGG)O3 72 nt14.99□□□□□ -0.01
NUP100Q02629 SCR1SCR1 522 nt14.85□□□□□ -0.03
NUP100Q02629 SHR5YOL110W 714 nt14.62□□□□□ -0.07
NUP100Q02629 RRN5YLR141W 1092 nt14.61□□□□□ -0.07
NUP100Q02629 YDJ1YNL064C 1230 nt14.49□□□□□ -0.09
NUP100Q02629 YER088W-BYER088W-B 147 nt14.32□□□□□ -0.12
NUP100Q02629 RSB1YOR049C 1065 nt14.29□□□□□ -0.12
NUP100Q02629 DEP1YAL013W 1218 nt14.25□□□□□ -0.13
NUP100Q02629 URN1YPR152C 1398 nt14.24□□□□□ -0.13
NUP100Q02629 GAR1YHR089C 618 nt14.19□□□□□ -0.14
NUP100Q02629 PUT4YOR348C 1884 nt14.15□□□□□ -0.14
NUP100Q02629 OPI9YLR338W 858 nt14.03□□□□□ -0.16
NUP100Q02629 RPN10YHR200W 807 nt13.99□□□□□ -0.17
NUP100Q02629 YNL208WYNL208W 600 nt13.99□□□□□ -0.17
NUP100Q02629 SAH1YER043C 1350 nt13.97□□□□□ -0.17
NUP100Q02629 PST2YDR032C 597 nt13.91□□□□□ -0.18
NUP100Q02629 ARE1YCR048W 1833 nt13.9□□□□□ -0.18
NUP100Q02629 YHR049C-AYHR049C-A 297 nt13.72□□□□□ -0.21
NUP100Q02629 POA1YBR022W 534 nt13.72□□□□□ -0.21
NUP100Q02629 TIR1YER011W 765 nt13.71□□□□□ -0.21
NUP100Q02629 PUN1YLR414C 792 nt13.61□□□□□ -0.23
NUP100Q02629 YJR018WYJR018W 363 nt13.58□□□□□ -0.24
NUP100Q02629 SSA1YAL005C 1929 nt13.56□□□□□ -0.24
NUP100Q02629 PTC2YER089C 1395 nt13.47□□□□□ -0.25
NUP100Q02629 BSC6YOL137W 1494 nt13.42□□□□□ -0.26
NUP100Q02629 BUD23YCR047C 828 nt13.41□□□□□ -0.26
NUP100Q02629 YJR120WYJR120W 351 nt13.4□□□□□ -0.26
NUP100Q02629 SHU1YHL006C 453 nt13.37□□□□□ -0.27
NUP100Q02629 SRB2YHR041C 633 nt13.36□□□□□ -0.27
NUP100Q02629 YKL097CYKL097C 411 nt13.33□□□□□ -0.28
NUP100Q02629 RPP2BYDR382W 333 nt13.28□□□□□ -0.28
NUP100Q02629 NAB2YGL122C 1578 nt13.28□□□□□ -0.28
NUP100Q02629 SSA3YBL075C 1950 nt13.26□□□□□ -0.29
NUP100Q02629 YAL037C-BYAL037C-B 975 nt13.19□□□□□ -0.3
NUP100Q02629 DAL1YIR027C 1383 nt13.11□□□□□ -0.31
NUP100Q02629 WWM1YFL010C 636 nt13.11□□□□□ -0.31
NUP100Q02629 FIS1YIL065C 468 nt13.11□□□□□ -0.31
NUP100Q02629 FPR4YLR449W 1179 nt13.1□□□□□ -0.31
NUP100Q02629 INM2YDR287W 879 nt13.08□□□□□ -0.32
NUP100Q02629 BDH2YAL061W 1254 nt13.03□□□□□ -0.32
NUP100Q02629 PHO4YFR034C 939 nt12.99□□□□□ -0.33
NUP100Q02629 YGR021WYGR021W 873 nt12.98□□□□□ -0.33
NUP100Q02629 HOM6YJR139C 1080 nt12.97□□□□□ -0.33
NUP100Q02629 YBL100CYBL100C 315 nt12.97□□□□□ -0.33
NUP100Q02629 MNP1YGL068W 585 nt12.92□□□□□ -0.34
NUP100Q02629 YFL021C-AYFL021C-A 855 nt12.87□□□□□ -0.35
NUP100Q02629 LSM3YLR438C-A 270 nt12.85□□□□□ -0.35
NUP100Q02629 YOR139CYOR139C 393 nt12.83□□□□□ -0.36
NUP100Q02629 FUN26YAL022C 1554 nt12.82□□□□□ -0.36
NUP100Q02629 SPT5YML010W 3192 nt12.79□□□□□ -0.36
NUP100Q02629 RKM5YLR137W 1104 nt12.78□□□□□ -0.36
NUP100Q02629 TRM9YML014W 840 nt12.78□□□□□ -0.36
NUP100Q02629 YPS1YLR120C 1710 nt12.74□□□□□ -0.37
NUP100Q02629 NPL3YDR432W 1245 nt12.7□□□□□ -0.38
NUP100Q02629 YDR095CYDR095C 411 nt12.66□□□□□ -0.38
NUP100Q02629 YOL037CYOL037C 354 nt12.66□□□□□ -0.38
NUP100Q02629 CCT6YDR188W 1641 nt12.65□□□□□ -0.38
NUP100Q02629 ALF1YNL148C 765 nt12.62□□□□□ -0.39
NUP100Q02629 YHR165W-AYHR165W-A 312 nt12.61□□□□□ -0.39
NUP100Q02629 MEP2YNL142W 1500 nt12.59□□□□□ -0.39
NUP100Q02629 SUF2tP(AGG)C 72 nt12.53□□□□□ -0.4
NUP100Q02629 SUF10tP(AGG)N 72 nt12.53□□□□□ -0.4
NUP100Q02629 SIS1YNL007C 1059 nt12.45□□□□□ -0.42
NUP100Q02629 RPP2AYOL039W 321 nt12.43□□□□□ -0.42
NUP100Q02629 DCW1YKL046C 1350 nt12.43□□□□□ -0.42
NUP100Q02629 PTP1YDL230W 1008 nt12.4□□□□□ -0.42
NUP100Q02629 YLR281CYLR281C 468 nt12.38□□□□□ -0.43
NUP100Q02629 WHI5YOR083W 888 nt12.35□□□□□ -0.43
NUP100Q02629 tM(CAU)CtM(CAU)C 72 nt12.34□□□□□ -0.43
NUP100Q02629 IMT4tM(CAU)E 72 nt12.34□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms