Protein–RNA interactions for Protein: P29509

TRR1, Thioredoxin reductase 1, yeastyeast

Known RBP Predictions only

Length 319 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TRR1P29509 NSR1YGR159C 1245 nt17.16■□□□□ 0.34
TRR1P29509 YML009W-BYML009W-B 477 nt16.93■□□□□ 0.3
TRR1P29509 NOP1YDL014W 984 nt16.35■□□□□ 0.21
TRR1P29509 MDJ1YFL016C 1536 nt15.71■□□□□ 0.11
TRR1P29509 YKL036CYKL036C 393 nt14.74□□□□□ -0.05
TRR1P29509 YJL027CYJL027C 417 nt14.45□□□□□ -0.1
TRR1P29509 SRX1YKL086W 384 nt14.27□□□□□ -0.13
TRR1P29509 Q0297Q0297 156 nt14.19□□□□□ -0.14
TRR1P29509 DBP2YNL112W 1641 nt13.63□□□□□ -0.23
TRR1P29509 YCR051WYCR051W 669 nt13.49□□□□□ -0.25
TRR1P29509 YBR190WYBR190W 312 nt13.46□□□□□ -0.25
TRR1P29509 RTC3YHR087W 336 nt13.24□□□□□ -0.29
TRR1P29509 SCS3YGL126W 1143 nt13.22□□□□□ -0.29
TRR1P29509 TRN1tP(UGG)A 72 nt13.1□□□□□ -0.31
TRR1P29509 SUF9tP(UGG)F 72 nt13.1□□□□□ -0.31
TRR1P29509 SUF8tP(UGG)H 72 nt13.1□□□□□ -0.31
TRR1P29509 tP(UGG)LtP(UGG)L 72 nt13.1□□□□□ -0.31
TRR1P29509 SUF7tP(UGG)M 72 nt13.1□□□□□ -0.31
TRR1P29509 tP(UGG)N1tP(UGG)N1 72 nt13.1□□□□□ -0.31
TRR1P29509 tP(UGG)N2tP(UGG)N2 72 nt13.1□□□□□ -0.31
TRR1P29509 tP(UGG)O1tP(UGG)O1 72 nt13.1□□□□□ -0.31
TRR1P29509 SUF11tP(UGG)O2 72 nt13.1□□□□□ -0.31
TRR1P29509 CCC1YLR220W 969 nt13.03□□□□□ -0.32
TRR1P29509 SSA3YBL075C 1950 nt12.81□□□□□ -0.36
TRR1P29509 RVS167YDR388W 1449 nt12.8□□□□□ -0.36
TRR1P29509 YOL085CYOL085C 342 nt12.78□□□□□ -0.36
TRR1P29509 RPP1BYDL130W 321 nt12.73□□□□□ -0.37
TRR1P29509 PKP1YIL042C 1185 nt12.6□□□□□ -0.39
TRR1P29509 SCJ1YMR214W 1134 nt12.59□□□□□ -0.39
TRR1P29509 PUT4YOR348C 1884 nt12.55□□□□□ -0.4
TRR1P29509 tP(UGG)O3tP(UGG)O3 72 nt12.29□□□□□ -0.44
TRR1P29509 SHR5YOL110W 714 nt12.2□□□□□ -0.46
TRR1P29509 ARE1YCR048W 1833 nt12.2□□□□□ -0.46
TRR1P29509 PET122YER153C 765 nt12.19□□□□□ -0.46
TRR1P29509 URN1YPR152C 1398 nt12.18□□□□□ -0.46
TRR1P29509 POA1YBR022W 534 nt12.18□□□□□ -0.46
TRR1P29509 SAH1YER043C 1350 nt12.13□□□□□ -0.47
TRR1P29509 YHR049C-AYHR049C-A 297 nt12.1□□□□□ -0.47
TRR1P29509 DEP1YAL013W 1218 nt12.09□□□□□ -0.47
TRR1P29509 OPI9YLR338W 858 nt12.05□□□□□ -0.48
TRR1P29509 BSC6YOL137W 1494 nt11.99□□□□□ -0.49
TRR1P29509 SCR1SCR1 522 nt11.98□□□□□ -0.49
TRR1P29509 RPN10YHR200W 807 nt11.9□□□□□ -0.5
TRR1P29509 YDJ1YNL064C 1230 nt11.9□□□□□ -0.5
TRR1P29509 BUD23YCR047C 828 nt11.83□□□□□ -0.52
TRR1P29509 RRN5YLR141W 1092 nt11.8□□□□□ -0.52
TRR1P29509 YNL208WYNL208W 600 nt11.79□□□□□ -0.52
TRR1P29509 ATS1YAL020C 1002 nt11.73□□□□□ -0.53
TRR1P29509 PUN1YLR414C 792 nt11.71□□□□□ -0.53
TRR1P29509 GAR1YHR089C 618 nt11.68□□□□□ -0.54
TRR1P29509 PTC2YER089C 1395 nt11.67□□□□□ -0.54
TRR1P29509 SPT5YML010W 3192 nt11.63□□□□□ -0.55
TRR1P29509 YER088W-BYER088W-B 147 nt11.57□□□□□ -0.56
TRR1P29509 YJR018WYJR018W 363 nt11.57□□□□□ -0.56
TRR1P29509 NAB2YGL122C 1578 nt11.56□□□□□ -0.56
TRR1P29509 SSA4YER103W 1929 nt11.52□□□□□ -0.56
TRR1P29509 RSB1YOR049C 1065 nt11.45□□□□□ -0.58
TRR1P29509 FPR4YLR449W 1179 nt11.38□□□□□ -0.59
TRR1P29509 DAL1YIR027C 1383 nt11.33□□□□□ -0.6
TRR1P29509 FIS1YIL065C 468 nt11.33□□□□□ -0.6
TRR1P29509 TIR1YER011W 765 nt11.3□□□□□ -0.6
TRR1P29509 MEP2YNL142W 1500 nt11.28□□□□□ -0.6
TRR1P29509 RPP2BYDR382W 333 nt11.25□□□□□ -0.61
TRR1P29509 YJR120WYJR120W 351 nt11.24□□□□□ -0.61
TRR1P29509 SSA1YAL005C 1929 nt11.23□□□□□ -0.61
TRR1P29509 PHO4YFR034C 939 nt11.22□□□□□ -0.61
TRR1P29509 INM2YDR287W 879 nt11.2□□□□□ -0.62
TRR1P29509 YPS1YLR120C 1710 nt11.14□□□□□ -0.63
TRR1P29509 YHR165W-AYHR165W-A 312 nt11.12□□□□□ -0.63
TRR1P29509 DCW1YKL046C 1350 nt11.12□□□□□ -0.63
TRR1P29509 BDF1YLR399C 2061 nt11.07□□□□□ -0.64
TRR1P29509 YBL100CYBL100C 315 nt11.06□□□□□ -0.64
TRR1P29509 YDR095CYDR095C 411 nt10.99□□□□□ -0.65
TRR1P29509 SRB2YHR041C 633 nt10.96□□□□□ -0.65
TRR1P29509 EMI2YDR516C 1503 nt10.95□□□□□ -0.66
TRR1P29509 YMR090WYMR090W 684 nt10.95□□□□□ -0.66
TRR1P29509 PST2YDR032C 597 nt10.93□□□□□ -0.66
TRR1P29509 TAT1YBR069C 1860 nt10.92□□□□□ -0.66
TRR1P29509 BDH2YAL061W 1254 nt10.9□□□□□ -0.66
TRR1P29509 FUN26YAL022C 1554 nt10.9□□□□□ -0.67
TRR1P29509 ALF1YNL148C 765 nt10.89□□□□□ -0.67
TRR1P29509 YBR220CYBR220C 1683 nt10.86□□□□□ -0.67
TRR1P29509 YDL221WYDL221W 552 nt10.82□□□□□ -0.68
TRR1P29509 TRM9YML014W 840 nt10.81□□□□□ -0.68
TRR1P29509 RPP2AYOL039W 321 nt10.81□□□□□ -0.68
TRR1P29509 CAC2YML102W 1407 nt10.79□□□□□ -0.68
TRR1P29509 SDH1YKL148C 1923 nt10.77□□□□□ -0.69
TRR1P29509 PTP1YDL230W 1008 nt10.76□□□□□ -0.69
TRR1P29509 WWM1YFL010C 636 nt10.73□□□□□ -0.69
TRR1P29509 LSM3YLR438C-A 270 nt10.71□□□□□ -0.69
TRR1P29509 CCT6YDR188W 1641 nt10.67□□□□□ -0.7
TRR1P29509 SUF2tP(AGG)C 72 nt10.66□□□□□ -0.7
TRR1P29509 SUF10tP(AGG)N 72 nt10.66□□□□□ -0.7
TRR1P29509 SCC4YER147C 1875 nt10.66□□□□□ -0.7
TRR1P29509 SIS1YNL007C 1059 nt10.63□□□□□ -0.71
TRR1P29509 IRC15YPL017C 1500 nt10.62□□□□□ -0.71
TRR1P29509 YJL225CYJL225C 5277 nt10.61□□□□□ -0.71
TRR1P29509 YFL021C-AYFL021C-A 855 nt10.59□□□□□ -0.71
TRR1P29509 YGR021WYGR021W 873 nt10.59□□□□□ -0.71
TRR1P29509 GIS3YLR094C 1509 nt10.58□□□□□ -0.72
Retrieved 100 of 7,029 protein–RNA pairs in 15.9 ms