Protein–RNA interactions for Protein: P36516

MRPL3, 54S ribosomal protein L3, mitochondrial, yeastyeast

Predictions only

Length 390 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
MRPL3P36516 NSR1YGR159C 1245 nt17.46■□□□□ 0.39
MRPL3P36516 YML009W-BYML009W-B 477 nt17.05■□□□□ 0.32
MRPL3P36516 NOP1YDL014W 984 nt16.35■□□□□ 0.21
MRPL3P36516 MDJ1YFL016C 1536 nt16.07■□□□□ 0.16
MRPL3P36516 YJL027CYJL027C 417 nt14.8□□□□□ -0.04
MRPL3P36516 YKL036CYKL036C 393 nt14.48□□□□□ -0.09
MRPL3P36516 SRX1YKL086W 384 nt14.24□□□□□ -0.13
MRPL3P36516 Q0297Q0297 156 nt14.07□□□□□ -0.16
MRPL3P36516 SSA3YBL075C 1950 nt14.04□□□□□ -0.16
MRPL3P36516 DBP2YNL112W 1641 nt13.93□□□□□ -0.18
MRPL3P36516 YBR190WYBR190W 312 nt13.88□□□□□ -0.19
MRPL3P36516 RTC3YHR087W 336 nt13.55□□□□□ -0.24
MRPL3P36516 YCR051WYCR051W 669 nt13.47□□□□□ -0.25
MRPL3P36516 TRN1tP(UGG)A 72 nt13.24□□□□□ -0.29
MRPL3P36516 SUF9tP(UGG)F 72 nt13.24□□□□□ -0.29
MRPL3P36516 SUF8tP(UGG)H 72 nt13.24□□□□□ -0.29
MRPL3P36516 tP(UGG)LtP(UGG)L 72 nt13.24□□□□□ -0.29
MRPL3P36516 SUF7tP(UGG)M 72 nt13.24□□□□□ -0.29
MRPL3P36516 tP(UGG)N1tP(UGG)N1 72 nt13.24□□□□□ -0.29
MRPL3P36516 tP(UGG)N2tP(UGG)N2 72 nt13.24□□□□□ -0.29
MRPL3P36516 tP(UGG)O1tP(UGG)O1 72 nt13.24□□□□□ -0.29
MRPL3P36516 SUF11tP(UGG)O2 72 nt13.24□□□□□ -0.29
MRPL3P36516 CCC1YLR220W 969 nt13.09□□□□□ -0.31
MRPL3P36516 RVS167YDR388W 1449 nt13.05□□□□□ -0.32
MRPL3P36516 PUT4YOR348C 1884 nt13.04□□□□□ -0.32
MRPL3P36516 SCS3YGL126W 1143 nt12.84□□□□□ -0.35
MRPL3P36516 SCJ1YMR214W 1134 nt12.78□□□□□ -0.36
MRPL3P36516 RPP1BYDL130W 321 nt12.63□□□□□ -0.39
MRPL3P36516 ARE1YCR048W 1833 nt12.6□□□□□ -0.39
MRPL3P36516 POA1YBR022W 534 nt12.58□□□□□ -0.4
MRPL3P36516 YOL085CYOL085C 342 nt12.54□□□□□ -0.4
MRPL3P36516 YHR049C-AYHR049C-A 297 nt12.49□□□□□ -0.41
MRPL3P36516 SAH1YER043C 1350 nt12.44□□□□□ -0.42
MRPL3P36516 URN1YPR152C 1398 nt12.44□□□□□ -0.42
MRPL3P36516 BSC6YOL137W 1494 nt12.44□□□□□ -0.42
MRPL3P36516 SHR5YOL110W 714 nt12.42□□□□□ -0.42
MRPL3P36516 PKP1YIL042C 1185 nt12.41□□□□□ -0.42
MRPL3P36516 SPT5YML010W 3192 nt12.39□□□□□ -0.43
MRPL3P36516 OPI9YLR338W 858 nt12.38□□□□□ -0.43
MRPL3P36516 SSA4YER103W 1929 nt12.35□□□□□ -0.43
MRPL3P36516 tP(UGG)O3tP(UGG)O3 72 nt12.32□□□□□ -0.44
MRPL3P36516 DEP1YAL013W 1218 nt12.24□□□□□ -0.45
MRPL3P36516 RPN10YHR200W 807 nt12.17□□□□□ -0.46
MRPL3P36516 BUD23YCR047C 828 nt12.16□□□□□ -0.46
MRPL3P36516 PET122YER153C 765 nt12.13□□□□□ -0.47
MRPL3P36516 PUN1YLR414C 792 nt12.05□□□□□ -0.48
MRPL3P36516 YNL208WYNL208W 600 nt12.02□□□□□ -0.49
MRPL3P36516 PTC2YER089C 1395 nt11.97□□□□□ -0.49
MRPL3P36516 BDF1YLR399C 2061 nt11.96□□□□□ -0.5
MRPL3P36516 YDJ1YNL064C 1230 nt11.94□□□□□ -0.5
MRPL3P36516 NAB2YGL122C 1578 nt11.92□□□□□ -0.5
MRPL3P36516 SCR1SCR1 522 nt11.88□□□□□ -0.51
MRPL3P36516 YJR018WYJR018W 363 nt11.83□□□□□ -0.52
MRPL3P36516 TAT1YBR069C 1860 nt11.78□□□□□ -0.52
MRPL3P36516 GAR1YHR089C 618 nt11.76□□□□□ -0.53
MRPL3P36516 MEP2YNL142W 1500 nt11.75□□□□□ -0.53
MRPL3P36516 RRN5YLR141W 1092 nt11.7□□□□□ -0.54
MRPL3P36516 FIS1YIL065C 468 nt11.68□□□□□ -0.54
MRPL3P36516 PAC11YDR488C 1602 nt11.68□□□□□ -0.54
MRPL3P36516 DAL1YIR027C 1383 nt11.66□□□□□ -0.54
MRPL3P36516 FPR4YLR449W 1179 nt11.61□□□□□ -0.55
MRPL3P36516 PHO4YFR034C 939 nt11.54□□□□□ -0.56
MRPL3P36516 DCW1YKL046C 1350 nt11.52□□□□□ -0.57
MRPL3P36516 YPS1YLR120C 1710 nt11.51□□□□□ -0.57
MRPL3P36516 INM2YDR287W 879 nt11.5□□□□□ -0.57
MRPL3P36516 RPP2BYDR382W 333 nt11.47□□□□□ -0.57
MRPL3P36516 YER088W-BYER088W-B 147 nt11.47□□□□□ -0.57
MRPL3P36516 YJR120WYJR120W 351 nt11.47□□□□□ -0.57
MRPL3P36516 YHR165W-AYHR165W-A 312 nt11.45□□□□□ -0.58
MRPL3P36516 YMR090WYMR090W 684 nt11.4□□□□□ -0.58
MRPL3P36516 TIR1YER011W 765 nt11.39□□□□□ -0.59
MRPL3P36516 YBR220CYBR220C 1683 nt11.38□□□□□ -0.59
MRPL3P36516 EMI2YDR516C 1503 nt11.38□□□□□ -0.59
MRPL3P36516 YDR095CYDR095C 411 nt11.36□□□□□ -0.59
MRPL3P36516 NVJ2YPR091C 2313 nt11.36□□□□□ -0.59
MRPL3P36516 SSA1YAL005C 1929 nt11.35□□□□□ -0.59
MRPL3P36516 RSB1YOR049C 1065 nt11.31□□□□□ -0.6
MRPL3P36516 ATS1YAL020C 1002 nt11.3□□□□□ -0.6
MRPL3P36516 YBL100CYBL100C 315 nt11.29□□□□□ -0.6
MRPL3P36516 YDL221WYDL221W 552 nt11.25□□□□□ -0.61
MRPL3P36516 SDH1YKL148C 1923 nt11.22□□□□□ -0.61
MRPL3P36516 PCH2YBR186W 1695 nt11.17□□□□□ -0.62
MRPL3P36516 RPP2AYOL039W 321 nt11.15□□□□□ -0.62
MRPL3P36516 CAC2YML102W 1407 nt11.14□□□□□ -0.63
MRPL3P36516 FUN26YAL022C 1554 nt11.13□□□□□ -0.63
MRPL3P36516 ALF1YNL148C 765 nt11.13□□□□□ -0.63
MRPL3P36516 GUT2YIL155C 1950 nt11.13□□□□□ -0.63
MRPL3P36516 PTP1YDL230W 1008 nt11.11□□□□□ -0.63
MRPL3P36516 SEC11YIR022W 504 nt11.1□□□□□ -0.63
MRPL3P36516 BDH2YAL061W 1254 nt11.1□□□□□ -0.63
MRPL3P36516 SCC4YER147C 1875 nt11.06□□□□□ -0.64
MRPL3P36516 SRB2YHR041C 633 nt11□□□□□ -0.65
MRPL3P36516 TRM9YML014W 840 nt11□□□□□ -0.65
MRPL3P36516 FPS1YLL043W 2010 nt11□□□□□ -0.65
MRPL3P36516 IRC15YPL017C 1500 nt10.98□□□□□ -0.65
MRPL3P36516 PIB2YGL023C 1908 nt10.93□□□□□ -0.66
MRPL3P36516 GIS3YLR094C 1509 nt10.93□□□□□ -0.66
MRPL3P36516 SIS1YNL007C 1059 nt10.92□□□□□ -0.66
MRPL3P36516 CCT6YDR188W 1641 nt10.91□□□□□ -0.66
MRPL3P36516 SUF2tP(AGG)C 72 nt10.91□□□□□ -0.66
Retrieved 100 of 7,029 protein–RNA pairs in 14.7 ms