Protein–RNA interactions for Protein: P57743

LSM3, U6 snRNA-associated Sm-like protein LSm3, yeastyeast

Known RBP Predictions only

Length 89 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
LSM3P57743 NSR1YGR159C 1245 nt20.08■□□□□ 0.81
LSM3P57743 YML009W-BYML009W-B 477 nt19.99■□□□□ 0.79
LSM3P57743 NOP1YDL014W 984 nt19.34■□□□□ 0.69
LSM3P57743 MDJ1YFL016C 1536 nt18.05■□□□□ 0.48
LSM3P57743 YKL036CYKL036C 393 nt17.62■□□□□ 0.41
LSM3P57743 SRX1YKL086W 384 nt16.9■□□□□ 0.3
LSM3P57743 Q0297Q0297 156 nt16.85■□□□□ 0.29
LSM3P57743 YJL027CYJL027C 417 nt16.65■□□□□ 0.26
LSM3P57743 YCR051WYCR051W 669 nt16■□□□□ 0.15
LSM3P57743 SCS3YGL126W 1143 nt15.9■□□□□ 0.14
LSM3P57743 DBP2YNL112W 1641 nt15.89■□□□□ 0.13
LSM3P57743 YBR190WYBR190W 312 nt15.47■□□□□ 0.07
LSM3P57743 TRN1tP(UGG)A 72 nt15.43■□□□□ 0.06
LSM3P57743 SUF9tP(UGG)F 72 nt15.43■□□□□ 0.06
LSM3P57743 SUF8tP(UGG)H 72 nt15.43■□□□□ 0.06
LSM3P57743 tP(UGG)LtP(UGG)L 72 nt15.43■□□□□ 0.06
LSM3P57743 SUF7tP(UGG)M 72 nt15.43■□□□□ 0.06
LSM3P57743 tP(UGG)N1tP(UGG)N1 72 nt15.43■□□□□ 0.06
LSM3P57743 tP(UGG)N2tP(UGG)N2 72 nt15.43■□□□□ 0.06
LSM3P57743 tP(UGG)O1tP(UGG)O1 72 nt15.43■□□□□ 0.06
LSM3P57743 SUF11tP(UGG)O2 72 nt15.43■□□□□ 0.06
LSM3P57743 YOL085CYOL085C 342 nt15.26■□□□□ 0.03
LSM3P57743 CCC1YLR220W 969 nt15.25■□□□□ 0.03
LSM3P57743 RPP1BYDL130W 321 nt15.12■□□□□ 0.01
LSM3P57743 RTC3YHR087W 336 nt15.09■□□□□ 0.01
LSM3P57743 PKP1YIL042C 1185 nt15.05■□□□□ -0
LSM3P57743 RVS167YDR388W 1449 nt14.88□□□□□ -0.03
LSM3P57743 SCJ1YMR214W 1134 nt14.76□□□□□ -0.05
LSM3P57743 tP(UGG)O3tP(UGG)O3 72 nt14.51□□□□□ -0.09
LSM3P57743 PET122YER153C 765 nt14.47□□□□□ -0.09
LSM3P57743 SHR5YOL110W 714 nt14.31□□□□□ -0.12
LSM3P57743 SCR1SCR1 522 nt14.25□□□□□ -0.13
LSM3P57743 PUT4YOR348C 1884 nt14.24□□□□□ -0.13
LSM3P57743 ATS1YAL020C 1002 nt14.15□□□□□ -0.14
LSM3P57743 URN1YPR152C 1398 nt14.05□□□□□ -0.16
LSM3P57743 YDJ1YNL064C 1230 nt14.04□□□□□ -0.16
LSM3P57743 RRN5YLR141W 1092 nt14.03□□□□□ -0.16
LSM3P57743 DEP1YAL013W 1218 nt13.96□□□□□ -0.17
LSM3P57743 ARE1YCR048W 1833 nt13.91□□□□□ -0.18
LSM3P57743 OPI9YLR338W 858 nt13.9□□□□□ -0.18
LSM3P57743 SAH1YER043C 1350 nt13.87□□□□□ -0.19
LSM3P57743 SSA3YBL075C 1950 nt13.85□□□□□ -0.19
LSM3P57743 RPN10YHR200W 807 nt13.79□□□□□ -0.2
LSM3P57743 GAR1YHR089C 618 nt13.76□□□□□ -0.21
LSM3P57743 POA1YBR022W 534 nt13.76□□□□□ -0.21
LSM3P57743 YER088W-BYER088W-B 147 nt13.75□□□□□ -0.21
LSM3P57743 YNL208WYNL208W 600 nt13.74□□□□□ -0.21
LSM3P57743 YHR049C-AYHR049C-A 297 nt13.72□□□□□ -0.21
LSM3P57743 RSB1YOR049C 1065 nt13.66□□□□□ -0.22
LSM3P57743 BSC6YOL137W 1494 nt13.51□□□□□ -0.25
LSM3P57743 PUN1YLR414C 792 nt13.5□□□□□ -0.25
LSM3P57743 YJR018WYJR018W 363 nt13.39□□□□□ -0.27
LSM3P57743 PTC2YER089C 1395 nt13.37□□□□□ -0.27
LSM3P57743 BUD23YCR047C 828 nt13.37□□□□□ -0.27
LSM3P57743 TIR1YER011W 765 nt13.31□□□□□ -0.28
LSM3P57743 NAB2YGL122C 1578 nt13.24□□□□□ -0.29
LSM3P57743 SSA1YAL005C 1929 nt13.21□□□□□ -0.3
LSM3P57743 PST2YDR032C 597 nt13.15□□□□□ -0.3
LSM3P57743 YJR120WYJR120W 351 nt13.14□□□□□ -0.31
LSM3P57743 SPT5YML010W 3192 nt13.08□□□□□ -0.32
LSM3P57743 RPP2BYDR382W 333 nt13.05□□□□□ -0.32
LSM3P57743 FIS1YIL065C 468 nt13.03□□□□□ -0.32
LSM3P57743 DAL1YIR027C 1383 nt13.02□□□□□ -0.33
LSM3P57743 FPR4YLR449W 1179 nt12.96□□□□□ -0.33
LSM3P57743 INM2YDR287W 879 nt12.95□□□□□ -0.34
LSM3P57743 SRB2YHR041C 633 nt12.94□□□□□ -0.34
LSM3P57743 PHO4YFR034C 939 nt12.9□□□□□ -0.34
LSM3P57743 YBL100CYBL100C 315 nt12.78□□□□□ -0.36
LSM3P57743 BDH2YAL061W 1254 nt12.76□□□□□ -0.37
LSM3P57743 YPS1YLR120C 1710 nt12.73□□□□□ -0.37
LSM3P57743 MEP2YNL142W 1500 nt12.71□□□□□ -0.38
LSM3P57743 SSA4YER103W 1929 nt12.7□□□□□ -0.38
LSM3P57743 WWM1YFL010C 636 nt12.68□□□□□ -0.38
LSM3P57743 SHU1YHL006C 453 nt12.67□□□□□ -0.38
LSM3P57743 FUN26YAL022C 1554 nt12.62□□□□□ -0.39
LSM3P57743 YDR095CYDR095C 411 nt12.62□□□□□ -0.39
LSM3P57743 YHR165W-AYHR165W-A 312 nt12.6□□□□□ -0.39
LSM3P57743 YKL097CYKL097C 411 nt12.56□□□□□ -0.4
LSM3P57743 LSM3YLR438C-A 270 nt12.55□□□□□ -0.4
LSM3P57743 TRM9YML014W 840 nt12.55□□□□□ -0.4
LSM3P57743 YGR021WYGR021W 873 nt12.54□□□□□ -0.4
LSM3P57743 YAL037C-BYAL037C-B 975 nt12.54□□□□□ -0.4
LSM3P57743 DCW1YKL046C 1350 nt12.5□□□□□ -0.41
LSM3P57743 YFL021C-AYFL021C-A 855 nt12.49□□□□□ -0.41
LSM3P57743 HOM6YJR139C 1080 nt12.49□□□□□ -0.41
LSM3P57743 ALF1YNL148C 765 nt12.49□□□□□ -0.41
LSM3P57743 CCT6YDR188W 1641 nt12.45□□□□□ -0.42
LSM3P57743 MNP1YGL068W 585 nt12.38□□□□□ -0.43
LSM3P57743 RPP2AYOL039W 321 nt12.37□□□□□ -0.43
LSM3P57743 SUF2tP(AGG)C 72 nt12.36□□□□□ -0.43
LSM3P57743 SUF10tP(AGG)N 72 nt12.36□□□□□ -0.43
LSM3P57743 PTP1YDL230W 1008 nt12.35□□□□□ -0.43
LSM3P57743 EMI2YDR516C 1503 nt12.34□□□□□ -0.43
LSM3P57743 SIS1YNL007C 1059 nt12.32□□□□□ -0.44
LSM3P57743 RKM5YLR137W 1104 nt12.3□□□□□ -0.44
LSM3P57743 CAC2YML102W 1407 nt12.28□□□□□ -0.44
LSM3P57743 YMR090WYMR090W 684 nt12.27□□□□□ -0.45
LSM3P57743 YDL221WYDL221W 552 nt12.24□□□□□ -0.45
LSM3P57743 BDF1YLR399C 2061 nt12.23□□□□□ -0.45
LSM3P57743 YBR220CYBR220C 1683 nt12.19□□□□□ -0.46
Retrieved 100 of 7,029 protein–RNA pairs in 15.8 ms