Protein–RNA interactions for Protein: Q07688

YPD1, Phosphorelay intermediate protein YPD1, yeastyeast

Predictions only

Length 167 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPD1Q07688 NSR1YGR159C 1245 nt16.85■□□□□ 0.29
YPD1Q07688 YML009W-BYML009W-B 477 nt16.8■□□□□ 0.28
YPD1Q07688 NOP1YDL014W 984 nt16.34■□□□□ 0.21
YPD1Q07688 MDJ1YFL016C 1536 nt15.04■□□□□ -0
YPD1Q07688 YKL036CYKL036C 393 nt14.88□□□□□ -0.03
YPD1Q07688 SRX1YKL086W 384 nt14.22□□□□□ -0.13
YPD1Q07688 Q0297Q0297 156 nt14.2□□□□□ -0.14
YPD1Q07688 YJL027CYJL027C 417 nt13.93□□□□□ -0.18
YPD1Q07688 SSA3YBL075C 1950 nt13.78□□□□□ -0.2
YPD1Q07688 YCR051WYCR051W 669 nt13.47□□□□□ -0.25
YPD1Q07688 SCS3YGL126W 1143 nt13.43□□□□□ -0.26
YPD1Q07688 DBP2YNL112W 1641 nt13.23□□□□□ -0.29
YPD1Q07688 YBR190WYBR190W 312 nt12.97□□□□□ -0.33
YPD1Q07688 TRN1tP(UGG)A 72 nt12.94□□□□□ -0.34
YPD1Q07688 SUF9tP(UGG)F 72 nt12.94□□□□□ -0.34
YPD1Q07688 SUF8tP(UGG)H 72 nt12.94□□□□□ -0.34
YPD1Q07688 tP(UGG)LtP(UGG)L 72 nt12.94□□□□□ -0.34
YPD1Q07688 SUF7tP(UGG)M 72 nt12.94□□□□□ -0.34
YPD1Q07688 tP(UGG)N1tP(UGG)N1 72 nt12.94□□□□□ -0.34
YPD1Q07688 tP(UGG)N2tP(UGG)N2 72 nt12.94□□□□□ -0.34
YPD1Q07688 tP(UGG)O1tP(UGG)O1 72 nt12.94□□□□□ -0.34
YPD1Q07688 SUF11tP(UGG)O2 72 nt12.94□□□□□ -0.34
YPD1Q07688 YOL085CYOL085C 342 nt12.86□□□□□ -0.35
YPD1Q07688 CCC1YLR220W 969 nt12.78□□□□□ -0.36
YPD1Q07688 RPP1BYDL130W 321 nt12.75□□□□□ -0.37
YPD1Q07688 RTC3YHR087W 336 nt12.71□□□□□ -0.37
YPD1Q07688 PKP1YIL042C 1185 nt12.64□□□□□ -0.39
YPD1Q07688 RVS167YDR388W 1449 nt12.54□□□□□ -0.4
YPD1Q07688 PUT4YOR348C 1884 nt12.32□□□□□ -0.44
YPD1Q07688 SCJ1YMR214W 1134 nt12.32□□□□□ -0.44
YPD1Q07688 tP(UGG)O3tP(UGG)O3 72 nt12.18□□□□□ -0.46
YPD1Q07688 PET122YER153C 765 nt12.15□□□□□ -0.46
YPD1Q07688 SCR1SCR1 522 nt12.07□□□□□ -0.48
YPD1Q07688 SHR5YOL110W 714 nt12.02□□□□□ -0.49
YPD1Q07688 ATS1YAL020C 1002 nt11.97□□□□□ -0.49
YPD1Q07688 POA1YBR022W 534 nt11.91□□□□□ -0.5
YPD1Q07688 ARE1YCR048W 1833 nt11.86□□□□□ -0.51
YPD1Q07688 PAC11YDR488C 1602 nt11.85□□□□□ -0.51
YPD1Q07688 NVJ2YPR091C 2313 nt11.82□□□□□ -0.52
YPD1Q07688 YDJ1YNL064C 1230 nt11.82□□□□□ -0.52
YPD1Q07688 BSC6YOL137W 1494 nt11.79□□□□□ -0.52
YPD1Q07688 RRN5YLR141W 1092 nt11.78□□□□□ -0.52
YPD1Q07688 YHR049C-AYHR049C-A 297 nt11.76□□□□□ -0.53
YPD1Q07688 SSA4YER103W 1929 nt11.76□□□□□ -0.53
YPD1Q07688 URN1YPR152C 1398 nt11.75□□□□□ -0.53
YPD1Q07688 FPS1YLL043W 2010 nt11.74□□□□□ -0.53
YPD1Q07688 SPT5YML010W 3192 nt11.69□□□□□ -0.54
YPD1Q07688 SAH1YER043C 1350 nt11.66□□□□□ -0.54
YPD1Q07688 DEP1YAL013W 1218 nt11.65□□□□□ -0.54
YPD1Q07688 RPN10YHR200W 807 nt11.62□□□□□ -0.55
YPD1Q07688 OPI9YLR338W 858 nt11.62□□□□□ -0.55
YPD1Q07688 SSA1YAL005C 1929 nt11.58□□□□□ -0.55
YPD1Q07688 YER088W-BYER088W-B 147 nt11.56□□□□□ -0.56
YPD1Q07688 GAR1YHR089C 618 nt11.53□□□□□ -0.56
YPD1Q07688 YNL208WYNL208W 600 nt11.53□□□□□ -0.56
YPD1Q07688 RSB1YOR049C 1065 nt11.52□□□□□ -0.57
YPD1Q07688 BUD23YCR047C 828 nt11.47□□□□□ -0.57
YPD1Q07688 BDF1YLR399C 2061 nt11.33□□□□□ -0.6
YPD1Q07688 PUN1YLR414C 792 nt11.31□□□□□ -0.6
YPD1Q07688 PTC2YER089C 1395 nt11.21□□□□□ -0.61
YPD1Q07688 YJR018WYJR018W 363 nt11.2□□□□□ -0.62
YPD1Q07688 TAT1YBR069C 1860 nt11.19□□□□□ -0.62
YPD1Q07688 TIR1YER011W 765 nt11.18□□□□□ -0.62
YPD1Q07688 NAB2YGL122C 1578 nt11.18□□□□□ -0.62
YPD1Q07688 MEP2YNL142W 1500 nt11.14□□□□□ -0.63
YPD1Q07688 PST2YDR032C 597 nt11.1□□□□□ -0.63
YPD1Q07688 RDN37-1RDN37-1 5354 nt11.06□□□□□ -0.64
YPD1Q07688 RDN37-2RDN37-2 5354 nt11.06□□□□□ -0.64
YPD1Q07688 RPP2BYDR382W 333 nt11□□□□□ -0.65
YPD1Q07688 YJL225CYJL225C 5277 nt10.96□□□□□ -0.65
YPD1Q07688 DCW1YKL046C 1350 nt10.92□□□□□ -0.66
YPD1Q07688 YJR120WYJR120W 351 nt10.92□□□□□ -0.66
YPD1Q07688 FPR4YLR449W 1179 nt10.89□□□□□ -0.67
YPD1Q07688 DAL1YIR027C 1383 nt10.89□□□□□ -0.67
YPD1Q07688 FIS1YIL065C 468 nt10.88□□□□□ -0.67
YPD1Q07688 YMR090WYMR090W 684 nt10.88□□□□□ -0.67
YPD1Q07688 INM2YDR287W 879 nt10.85□□□□□ -0.67
YPD1Q07688 UME6YDR207C 2511 nt10.84□□□□□ -0.67
YPD1Q07688 YBR220CYBR220C 1683 nt10.82□□□□□ -0.68
YPD1Q07688 YHR165W-AYHR165W-A 312 nt10.81□□□□□ -0.68
YPD1Q07688 YPS1YLR120C 1710 nt10.81□□□□□ -0.68
YPD1Q07688 EMI2YDR516C 1503 nt10.79□□□□□ -0.68
YPD1Q07688 PHO4YFR034C 939 nt10.77□□□□□ -0.69
YPD1Q07688 SRB2YHR041C 633 nt10.74□□□□□ -0.69
YPD1Q07688 BDH2YAL061W 1254 nt10.71□□□□□ -0.69
YPD1Q07688 YBL100CYBL100C 315 nt10.71□□□□□ -0.69
YPD1Q07688 SHU1YHL006C 453 nt10.66□□□□□ -0.7
YPD1Q07688 SDH1YKL148C 1923 nt10.65□□□□□ -0.7
YPD1Q07688 PCH2YBR186W 1695 nt10.64□□□□□ -0.71
YPD1Q07688 YDL221WYDL221W 552 nt10.64□□□□□ -0.71
YPD1Q07688 WWM1YFL010C 636 nt10.62□□□□□ -0.71
YPD1Q07688 YDR095CYDR095C 411 nt10.61□□□□□ -0.71
YPD1Q07688 YGR021WYGR021W 873 nt10.61□□□□□ -0.71
YPD1Q07688 SEC11YIR022W 504 nt10.61□□□□□ -0.71
YPD1Q07688 YKL097CYKL097C 411 nt10.61□□□□□ -0.71
YPD1Q07688 GUT2YIL155C 1950 nt10.59□□□□□ -0.71
YPD1Q07688 LSM3YLR438C-A 270 nt10.56□□□□□ -0.72
YPD1Q07688 FUN26YAL022C 1554 nt10.56□□□□□ -0.72
YPD1Q07688 TRM9YML014W 840 nt10.54□□□□□ -0.72
YPD1Q07688 YFL021C-AYFL021C-A 855 nt10.52□□□□□ -0.73
Retrieved 100 of 7,029 protein–RNA pairs in 14.4 ms