Protein–RNA interactions for Protein: P40327

RPT2, 26S proteasome regulatory subunit 4 homolog, yeastyeast

Known RBP Predictions only

Length 437 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPT2P40327 YML009W-BYML009W-B 477 nt21.54■■□□□ 1.04
RPT2P40327 NSR1YGR159C 1245 nt21.39■■□□□ 1.01
RPT2P40327 NOP1YDL014W 984 nt20.93■□□□□ 0.94
RPT2P40327 YKL036CYKL036C 393 nt19.38■□□□□ 0.69
RPT2P40327 MDJ1YFL016C 1536 nt18.98■□□□□ 0.63
RPT2P40327 Q0297Q0297 156 nt18.4■□□□□ 0.54
RPT2P40327 SRX1YKL086W 384 nt18.33■□□□□ 0.52
RPT2P40327 YJL027CYJL027C 417 nt18.07■□□□□ 0.48
RPT2P40327 SCS3YGL126W 1143 nt17.69■□□□□ 0.42
RPT2P40327 YCR051WYCR051W 669 nt17.35■□□□□ 0.37
RPT2P40327 DBP2YNL112W 1641 nt16.85■□□□□ 0.29
RPT2P40327 YOL085CYOL085C 342 nt16.81■□□□□ 0.28
RPT2P40327 TRN1tP(UGG)A 72 nt16.59■□□□□ 0.25
RPT2P40327 SUF9tP(UGG)F 72 nt16.59■□□□□ 0.25
RPT2P40327 SUF8tP(UGG)H 72 nt16.59■□□□□ 0.25
RPT2P40327 tP(UGG)LtP(UGG)L 72 nt16.59■□□□□ 0.25
RPT2P40327 SUF7tP(UGG)M 72 nt16.59■□□□□ 0.25
RPT2P40327 tP(UGG)N1tP(UGG)N1 72 nt16.59■□□□□ 0.25
RPT2P40327 tP(UGG)N2tP(UGG)N2 72 nt16.59■□□□□ 0.25
RPT2P40327 tP(UGG)O1tP(UGG)O1 72 nt16.59■□□□□ 0.25
RPT2P40327 SUF11tP(UGG)O2 72 nt16.59■□□□□ 0.25
RPT2P40327 PKP1YIL042C 1185 nt16.52■□□□□ 0.24
RPT2P40327 RPP1BYDL130W 321 nt16.49■□□□□ 0.23
RPT2P40327 CCC1YLR220W 969 nt16.33■□□□□ 0.2
RPT2P40327 YBR190WYBR190W 312 nt16.16■□□□□ 0.18
RPT2P40327 ATS1YAL020C 1002 nt15.82■□□□□ 0.12
RPT2P40327 SCJ1YMR214W 1134 nt15.79■□□□□ 0.12
RPT2P40327 PET122YER153C 765 nt15.76■□□□□ 0.11
RPT2P40327 RVS167YDR388W 1449 nt15.76■□□□□ 0.11
RPT2P40327 RTC3YHR087W 336 nt15.74■□□□□ 0.11
RPT2P40327 tP(UGG)O3tP(UGG)O3 72 nt15.68■□□□□ 0.1
RPT2P40327 SCR1SCR1 522 nt15.54■□□□□ 0.08
RPT2P40327 RRN5YLR141W 1092 nt15.3■□□□□ 0.04
RPT2P40327 SHR5YOL110W 714 nt15.26■□□□□ 0.03
RPT2P40327 YDJ1YNL064C 1230 nt15.17■□□□□ 0.02
RPT2P40327 YER088W-BYER088W-B 147 nt15.01□□□□□ -0.01
RPT2P40327 RSB1YOR049C 1065 nt14.96□□□□□ -0.01
RPT2P40327 GAR1YHR089C 618 nt14.8□□□□□ -0.04
RPT2P40327 URN1YPR152C 1398 nt14.8□□□□□ -0.04
RPT2P40327 DEP1YAL013W 1218 nt14.79□□□□□ -0.04
RPT2P40327 PUT4YOR348C 1884 nt14.69□□□□□ -0.06
RPT2P40327 PST2YDR032C 597 nt14.66□□□□□ -0.06
RPT2P40327 OPI9YLR338W 858 nt14.6□□□□□ -0.07
RPT2P40327 YNL208WYNL208W 600 nt14.57□□□□□ -0.08
RPT2P40327 RPN10YHR200W 807 nt14.56□□□□□ -0.08
RPT2P40327 Q0182Q0182 405 nt14.55□□□□□ -0.08
RPT2P40327 SAH1YER043C 1350 nt14.48□□□□□ -0.09
RPT2P40327 ARE1YCR048W 1833 nt14.43□□□□□ -0.1
RPT2P40327 TIR1YER011W 765 nt14.32□□□□□ -0.12
RPT2P40327 YHR049C-AYHR049C-A 297 nt14.21□□□□□ -0.13
RPT2P40327 POA1YBR022W 534 nt14.18□□□□□ -0.14
RPT2P40327 SSA1YAL005C 1929 nt14.16□□□□□ -0.14
RPT2P40327 PUN1YLR414C 792 nt14.16□□□□□ -0.14
RPT2P40327 SSA3YBL075C 1950 nt14.15□□□□□ -0.14
RPT2P40327 YJR018WYJR018W 363 nt14.11□□□□□ -0.15
RPT2P40327 YKL097CYKL097C 411 nt14.06□□□□□ -0.16
RPT2P40327 SHU1YHL006C 453 nt14.05□□□□□ -0.16
RPT2P40327 YJR120WYJR120W 351 nt14□□□□□ -0.17
RPT2P40327 SRB2YHR041C 633 nt13.99□□□□□ -0.17
RPT2P40327 PTC2YER089C 1395 nt13.96□□□□□ -0.17
RPT2P40327 BSC6YOL137W 1494 nt13.89□□□□□ -0.19
RPT2P40327 BUD23YCR047C 828 nt13.84□□□□□ -0.19
RPT2P40327 RPP2BYDR382W 333 nt13.8□□□□□ -0.2
RPT2P40327 YAL037C-BYAL037C-B 975 nt13.79□□□□□ -0.2
RPT2P40327 NAB2YGL122C 1578 nt13.79□□□□□ -0.2
RPT2P40327 WWM1YFL010C 636 nt13.7□□□□□ -0.22
RPT2P40327 FIS1YIL065C 468 nt13.67□□□□□ -0.22
RPT2P40327 DAL1YIR027C 1383 nt13.62□□□□□ -0.23
RPT2P40327 YGR021WYGR021W 873 nt13.61□□□□□ -0.23
RPT2P40327 HOM6YJR139C 1080 nt13.61□□□□□ -0.23
RPT2P40327 INM2YDR287W 879 nt13.59□□□□□ -0.23
RPT2P40327 BDH2YAL061W 1254 nt13.59□□□□□ -0.23
RPT2P40327 YOR139CYOR139C 393 nt13.55□□□□□ -0.24
RPT2P40327 MNP1YGL068W 585 nt13.54□□□□□ -0.24
RPT2P40327 FPR4YLR449W 1179 nt13.53□□□□□ -0.24
RPT2P40327 PHO4YFR034C 939 nt13.51□□□□□ -0.25
RPT2P40327 YBL100CYBL100C 315 nt13.49□□□□□ -0.25
RPT2P40327 YFL021C-AYFL021C-A 855 nt13.48□□□□□ -0.25
RPT2P40327 MOT3YMR070W 1473 nt13.47□□□□□ -0.25
RPT2P40327 LSM3YLR438C-A 270 nt13.42□□□□□ -0.26
RPT2P40327 RKM5YLR137W 1104 nt13.4□□□□□ -0.26
RPT2P40327 FPS1YLL043W 2010 nt13.35□□□□□ -0.27
RPT2P40327 NPL3YDR432W 1245 nt13.35□□□□□ -0.27
RPT2P40327 FUN26YAL022C 1554 nt13.33□□□□□ -0.28
RPT2P40327 YOL037CYOL037C 354 nt13.33□□□□□ -0.28
RPT2P40327 SPT5YML010W 3192 nt13.28□□□□□ -0.28
RPT2P40327 TRM9YML014W 840 nt13.28□□□□□ -0.28
RPT2P40327 YPS1YLR120C 1710 nt13.24□□□□□ -0.29
RPT2P40327 CCT6YDR188W 1641 nt13.21□□□□□ -0.3
RPT2P40327 YDR095CYDR095C 411 nt13.18□□□□□ -0.3
RPT2P40327 ALF1YNL148C 765 nt13.09□□□□□ -0.31
RPT2P40327 YHR165W-AYHR165W-A 312 nt13.04□□□□□ -0.32
RPT2P40327 MEP2YNL142W 1500 nt13.03□□□□□ -0.32
RPT2P40327 SUF2tP(AGG)C 72 nt13.03□□□□□ -0.32
RPT2P40327 SUF10tP(AGG)N 72 nt13.03□□□□□ -0.32
RPT2P40327 YLR281CYLR281C 468 nt13.02□□□□□ -0.33
RPT2P40327 tM(CAU)CtM(CAU)C 72 nt13□□□□□ -0.33
RPT2P40327 IMT4tM(CAU)E 72 nt13□□□□□ -0.33
RPT2P40327 IMT3tM(CAU)J3 72 nt13□□□□□ -0.33
RPT2P40327 IMT1tM(CAU)O1 72 nt13□□□□□ -0.33
Retrieved 100 of 7,029 protein–RNA pairs in 12.7 ms