Protein–RNA interactions for Protein: P20433

RPB4, DNA-directed RNA polymerase II subunit RPB4, yeastyeast

Predicted RBP Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPB4P20433 NSR1YGR159C 1245 nt20.23■□□□□ 0.83
RPB4P20433 YML009W-BYML009W-B 477 nt20.16■□□□□ 0.82
RPB4P20433 NOP1YDL014W 984 nt19.62■□□□□ 0.73
RPB4P20433 MDJ1YFL016C 1536 nt18.02■□□□□ 0.47
RPB4P20433 YKL036CYKL036C 393 nt17.9■□□□□ 0.46
RPB4P20433 SRX1YKL086W 384 nt17.09■□□□□ 0.33
RPB4P20433 Q0297Q0297 156 nt17.07■□□□□ 0.32
RPB4P20433 YJL027CYJL027C 417 nt16.69■□□□□ 0.26
RPB4P20433 YCR051WYCR051W 669 nt16.18■□□□□ 0.18
RPB4P20433 SCS3YGL126W 1143 nt16.16■□□□□ 0.18
RPB4P20433 DBP2YNL112W 1641 nt15.87■□□□□ 0.13
RPB4P20433 TRN1tP(UGG)A 72 nt15.53■□□□□ 0.08
RPB4P20433 SUF9tP(UGG)F 72 nt15.53■□□□□ 0.08
RPB4P20433 SUF8tP(UGG)H 72 nt15.53■□□□□ 0.08
RPB4P20433 tP(UGG)LtP(UGG)L 72 nt15.53■□□□□ 0.08
RPB4P20433 SUF7tP(UGG)M 72 nt15.53■□□□□ 0.08
RPB4P20433 tP(UGG)N1tP(UGG)N1 72 nt15.53■□□□□ 0.08
RPB4P20433 tP(UGG)N2tP(UGG)N2 72 nt15.53■□□□□ 0.08
RPB4P20433 tP(UGG)O1tP(UGG)O1 72 nt15.53■□□□□ 0.08
RPB4P20433 SUF11tP(UGG)O2 72 nt15.53■□□□□ 0.08
RPB4P20433 YBR190WYBR190W 312 nt15.49■□□□□ 0.07
RPB4P20433 YOL085CYOL085C 342 nt15.48■□□□□ 0.07
RPB4P20433 CCC1YLR220W 969 nt15.34■□□□□ 0.05
RPB4P20433 RPP1BYDL130W 321 nt15.32■□□□□ 0.04
RPB4P20433 PKP1YIL042C 1185 nt15.21■□□□□ 0.03
RPB4P20433 RTC3YHR087W 336 nt15.11■□□□□ 0.01
RPB4P20433 RVS167YDR388W 1449 nt15□□□□□ -0.01
RPB4P20433 SCJ1YMR214W 1134 nt14.77□□□□□ -0.05
RPB4P20433 tP(UGG)O3tP(UGG)O3 72 nt14.64□□□□□ -0.07
RPB4P20433 PET122YER153C 765 nt14.61□□□□□ -0.07
RPB4P20433 SSA3YBL075C 1950 nt14.56□□□□□ -0.08
RPB4P20433 SCR1SCR1 522 nt14.49□□□□□ -0.09
RPB4P20433 ATS1YAL020C 1002 nt14.43□□□□□ -0.1
RPB4P20433 SHR5YOL110W 714 nt14.41□□□□□ -0.1
RPB4P20433 YDJ1YNL064C 1230 nt14.2□□□□□ -0.14
RPB4P20433 RRN5YLR141W 1092 nt14.18□□□□□ -0.14
RPB4P20433 PUT4YOR348C 1884 nt14.13□□□□□ -0.15
RPB4P20433 URN1YPR152C 1398 nt14.08□□□□□ -0.16
RPB4P20433 DEP1YAL013W 1218 nt13.98□□□□□ -0.17
RPB4P20433 OPI9YLR338W 858 nt13.92□□□□□ -0.18
RPB4P20433 RPN10YHR200W 807 nt13.91□□□□□ -0.18
RPB4P20433 YER088W-BYER088W-B 147 nt13.9□□□□□ -0.18
RPB4P20433 RSB1YOR049C 1065 nt13.86□□□□□ -0.19
RPB4P20433 GAR1YHR089C 618 nt13.85□□□□□ -0.19
RPB4P20433 SAH1YER043C 1350 nt13.83□□□□□ -0.19
RPB4P20433 YNL208WYNL208W 600 nt13.83□□□□□ -0.2
RPB4P20433 ARE1YCR048W 1833 nt13.82□□□□□ -0.2
RPB4P20433 POA1YBR022W 534 nt13.67□□□□□ -0.22
RPB4P20433 YHR049C-AYHR049C-A 297 nt13.65□□□□□ -0.22
RPB4P20433 PUN1YLR414C 792 nt13.55□□□□□ -0.24
RPB4P20433 YJR018WYJR018W 363 nt13.43□□□□□ -0.26
RPB4P20433 TIR1YER011W 765 nt13.42□□□□□ -0.26
RPB4P20433 BSC6YOL137W 1494 nt13.41□□□□□ -0.26
RPB4P20433 PST2YDR032C 597 nt13.38□□□□□ -0.27
RPB4P20433 PTC2YER089C 1395 nt13.35□□□□□ -0.27
RPB4P20433 BUD23YCR047C 828 nt13.33□□□□□ -0.28
RPB4P20433 SSA1YAL005C 1929 nt13.25□□□□□ -0.29
RPB4P20433 NAB2YGL122C 1578 nt13.24□□□□□ -0.29
RPB4P20433 RPP2BYDR382W 333 nt13.17□□□□□ -0.3
RPB4P20433 YJR120WYJR120W 351 nt13.11□□□□□ -0.31
RPB4P20433 DAL1YIR027C 1383 nt13.03□□□□□ -0.32
RPB4P20433 INM2YDR287W 879 nt13.02□□□□□ -0.33
RPB4P20433 FIS1YIL065C 468 nt12.99□□□□□ -0.33
RPB4P20433 FPR4YLR449W 1179 nt12.97□□□□□ -0.33
RPB4P20433 SRB2YHR041C 633 nt12.92□□□□□ -0.34
RPB4P20433 PHO4YFR034C 939 nt12.89□□□□□ -0.35
RPB4P20433 SPT5YML010W 3192 nt12.85□□□□□ -0.35
RPB4P20433 SHU1YHL006C 453 nt12.85□□□□□ -0.35
RPB4P20433 BDH2YAL061W 1254 nt12.85□□□□□ -0.35
RPB4P20433 YBL100CYBL100C 315 nt12.83□□□□□ -0.36
RPB4P20433 YKL097CYKL097C 411 nt12.79□□□□□ -0.36
RPB4P20433 WWM1YFL010C 636 nt12.76□□□□□ -0.37
RPB4P20433 YGR021WYGR021W 873 nt12.73□□□□□ -0.37
RPB4P20433 YPS1YLR120C 1710 nt12.69□□□□□ -0.38
RPB4P20433 LSM3YLR438C-A 270 nt12.68□□□□□ -0.38
RPB4P20433 YAL037C-BYAL037C-B 975 nt12.67□□□□□ -0.38
RPB4P20433 FUN26YAL022C 1554 nt12.66□□□□□ -0.38
RPB4P20433 TRM9YML014W 840 nt12.64□□□□□ -0.39
RPB4P20433 YFL021C-AYFL021C-A 855 nt12.63□□□□□ -0.39
RPB4P20433 MEP2YNL142W 1500 nt12.62□□□□□ -0.39
RPB4P20433 HOM6YJR139C 1080 nt12.61□□□□□ -0.39
RPB4P20433 YDR095CYDR095C 411 nt12.59□□□□□ -0.39
RPB4P20433 YHR165W-AYHR165W-A 312 nt12.58□□□□□ -0.4
RPB4P20433 ALF1YNL148C 765 nt12.55□□□□□ -0.4
RPB4P20433 CCT6YDR188W 1641 nt12.51□□□□□ -0.41
RPB4P20433 FPS1YLL043W 2010 nt12.5□□□□□ -0.41
RPB4P20433 MNP1YGL068W 585 nt12.48□□□□□ -0.41
RPB4P20433 SSA4YER103W 1929 nt12.48□□□□□ -0.41
RPB4P20433 SUF2tP(AGG)C 72 nt12.46□□□□□ -0.41
RPB4P20433 SUF10tP(AGG)N 72 nt12.46□□□□□ -0.41
RPB4P20433 RKM5YLR137W 1104 nt12.44□□□□□ -0.42
RPB4P20433 PAC11YDR488C 1602 nt12.44□□□□□ -0.42
RPB4P20433 RPP2AYOL039W 321 nt12.37□□□□□ -0.43
RPB4P20433 NVJ2YPR091C 2313 nt12.37□□□□□ -0.43
RPB4P20433 DCW1YKL046C 1350 nt12.36□□□□□ -0.43
RPB4P20433 SIS1YNL007C 1059 nt12.33□□□□□ -0.44
RPB4P20433 YOL037CYOL037C 354 nt12.31□□□□□ -0.44
RPB4P20433 PTP1YDL230W 1008 nt12.28□□□□□ -0.44
RPB4P20433 YMR090WYMR090W 684 nt12.26□□□□□ -0.45
RPB4P20433 EMI2YDR516C 1503 nt12.26□□□□□ -0.45
Retrieved 100 of 7,029 protein–RNA pairs in 31.5 ms