RNA–Protein interactions for RNA: YBR222C

PCS60, Transcript of Oxalyl-CoA synthetase, yeastyeast

Gene PCS60, Length 1,632 nt, Biotype protein coding, Subcellular localisation Peroxisome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PCS60YBR222C GDE1Q02979 1223 aa7.01□□□□□ -1.29
PCS60YBR222C SGS1P35187 1447 aa7.01□□□□□ -1.29
PCS60YBR222C HSL1P34244 1518 aa7□□□□□ -1.29
PCS60YBR222C SEC27P41811 889 aaKnown RBP7□□□□□ -1.29
PCS60YBR222C TAF1P46677 1066 aa7□□□□□ -1.29
PCS60YBR222C YGL081WP53156 320 aa7□□□□□ -1.29
PCS60YBR222C NST1P53935 1240 aa7□□□□□ -1.29
PCS60YBR222C TMA64Q04600 565 aaKnown RBP7□□□□□ -1.29
PCS60YBR222C TY1B-AO13527 1196 aaKnown RBP6.99□□□□□ -1.29
PCS60YBR222C RAD51P25454 400 aa6.99□□□□□ -1.29
PCS60YBR222C BOI2P39969 1040 aa6.99□□□□□ -1.29
PCS60YBR222C VPS27P40343 622 aaKnown RBP6.99□□□□□ -1.29
PCS60YBR222C VMA4P22203 233 aaKnown RBP6.98□□□□□ -1.29
PCS60YBR222C HGH1P48362 394 aaKnown RBP6.98□□□□□ -1.29
PCS60YBR222C CLF1Q12309 687 aaPredicted RBP6.98□□□□□ -1.29
PCS60YBR222C OPI1P21957 404 aa6.98□□□□□ -1.29
PCS60YBR222C UBP9P39967 754 aa6.98□□□□□ -1.29
PCS60YBR222C IES1P43579 692 aa6.98□□□□□ -1.29
PCS60YBR222C NNF2P53253 936 aa6.98□□□□□ -1.29
PCS60YBR222C CEF1Q03654 590 aaPredicted RBP6.98□□□□□ -1.29
PCS60YBR222C YLR257WQ06146 321 aaKnown RBP6.98□□□□□ -1.29
PCS60YBR222C ETT1Q08421 412 aaKnown RBP6.98□□□□□ -1.29
PCS60YBR222C ARP8Q12386 881 aaKnown RBP RIP-Chip data6.98□□□□□ -1.29not detected
PCS60YBR222C TPM2P40414 161 aa6.97□□□□□ -1.29
PCS60YBR222C RRN6P32786 894 aa6.96□□□□□ -1.3
PCS60YBR222C SLD2P34252 453 aa6.96□□□□□ -1.3
PCS60YBR222C PUS1Q12211 544 aaKnown RBP6.96□□□□□ -1.3
PCS60YBR222C LEM3P42838 414 aa6.95□□□□□ -1.3
PCS60YBR222C ALD4P46367 519 aaKnown RBP6.95□□□□□ -1.3
PCS60YBR222C IMH1Q06704 911 aaKnown RBP6.95□□□□□ -1.3
PCS60YBR222C TY4B-PA0A0B7P3V8 1104 aa6.94□□□□□ -1.3
PCS60YBR222C KIN1P13185 1064 aa6.94□□□□□ -1.3
PCS60YBR222C ESF2P53743 316 aaKnown RBP6.94□□□□□ -1.3
PCS60YBR222C HEL2Q05580 639 aaKnown RBP6.94□□□□□ -1.3
PCS60YBR222C MAM3Q12296 706 aa6.94□□□□□ -1.3
PCS60YBR222C TY4A-HQ6Q5P6 413 aa6.94□□□□□ -1.3
PCS60YBR222C PWP2P25635 923 aaKnown RBP6.94□□□□□ -1.3
PCS60YBR222C NPR3P38742 1146 aa6.93□□□□□ -1.3
PCS60YBR222C HSP42Q12329 375 aa6.93□□□□□ -1.3
PCS60YBR222C ERP4Q12450 207 aa6.93□□□□□ -1.3
PCS60YBR222C BUD4P47136 1447 aa6.92□□□□□ -1.3
PCS60YBR222C PIM1P36775 1133 aa6.92□□□□□ -1.3
PCS60YBR222C MUM2P38236 366 aa6.92□□□□□ -1.3
PCS60YBR222C HOS2P53096 452 aaPredicted RBP6.92□□□□□ -1.3
PCS60YBR222C FAF1P40546 346 aaPredicted RBP6.91□□□□□ -1.3
PCS60YBR222C NOP58Q12499 511 aaKnown RBP6.91□□□□□ -1.3
PCS60YBR222C KEX1P09620 729 aa6.9□□□□□ -1.3
PCS60YBR222C RRP14P36080 434 aaKnown RBP6.9□□□□□ -1.3
PCS60YBR222C AIM20P40451 204 aa6.9□□□□□ -1.3
PCS60YBR222C PRP43P53131 767 aaKnown RBP6.9□□□□□ -1.3
PCS60YBR222C ECM16Q04217 1267 aaKnown RBP6.9□□□□□ -1.3
PCS60YBR222C COG4Q06096 861 aa6.9□□□□□ -1.3
PCS60YBR222C YLL054CQ12244 843 aa6.9□□□□□ -1.3
PCS60YBR222C NFU1P32860 256 aa6.9□□□□□ -1.31
PCS60YBR222C PSD2P53037 1138 aaKnown RBP6.9□□□□□ -1.31
PCS60YBR222C ENT2Q05785 613 aa6.9□□□□□ -1.31
PCS60YBR222C SUB2Q07478 446 aaKnown RBP6.9□□□□□ -1.31
PCS60YBR222C YOR238WQ08634 303 aa6.9□□□□□ -1.31
PCS60YBR222C SSF2Q12153 453 aaPredicted RBP6.9□□□□□ -1.31
PCS60YBR222C SNU66Q12420 587 aaPredicted RBP6.9□□□□□ -1.31
PCS60YBR222C TSR4P25040 408 aa6.89□□□□□ -1.31
PCS60YBR222C SAP190P36123 1033 aa6.89□□□□□ -1.31
PCS60YBR222C JIP5Q06214 492 aaPredicted RBP6.89□□□□□ -1.31
PCS60YBR222C YPR172WQ06608 200 aa6.89□□□□□ -1.31
PCS60YBR222C VPS5Q92331 675 aa6.89□□□□□ -1.31
PCS60YBR222C MAL31P38156 614 aa6.88□□□□□ -1.31
PCS60YBR222C CTF4Q01454 927 aa6.88□□□□□ -1.31
PCS60YBR222C YOL057WQ08225 711 aa6.88□□□□□ -1.31
PCS60YBR222C CHD1P32657 1468 aa6.88□□□□□ -1.31
PCS60YBR222C MDS3P53094 1487 aa6.88□□□□□ -1.31
PCS60YBR222C SPB4P25808 606 aaPredicted RBP6.87□□□□□ -1.31
PCS60YBR222C STE5P32917 917 aa6.87□□□□□ -1.31
PCS60YBR222C THO2P53552 1597 aaKnown RBP6.87□□□□□ -1.31
PCS60YBR222C MSM1P22438 575 aa6.87□□□□□ -1.31
PCS60YBR222C CBF5P33322 483 aaKnown RBP RIP-Chip data6.87□□□□□ -1.31not detected
PCS60YBR222C MGA2P40578 1113 aa6.87□□□□□ -1.31
PCS60YBR222C BFA1P47113 574 aa6.87□□□□□ -1.31
PCS60YBR222C TAN1P53072 289 aaPredicted RBP6.87□□□□□ -1.31
PCS60YBR222C VID30P53076 958 aa6.87□□□□□ -1.31
PCS60YBR222C BNI5P53890 448 aaKnown RBP6.87□□□□□ -1.31
PCS60YBR222C DNM1P54861 757 aa6.87□□□□□ -1.31
PCS60YBR222C SGT2Q12118 346 aaKnown RBP6.87□□□□□ -1.31
PCS60YBR222C SAC3P46674 1301 aa6.86□□□□□ -1.31
PCS60YBR222C CST6P40535 587 aa6.86□□□□□ -1.31
PCS60YBR222C YAP5P40574 245 aa6.86□□□□□ -1.31
PCS60YBR222C MDM1Q01846 1127 aa6.86□□□□□ -1.31
PCS60YBR222C PRP3Q03338 469 aaPredicted RBP6.86□□□□□ -1.31
PCS60YBR222C NOP56Q12460 504 aaKnown RBP RIP-Chip data6.86□□□□□ -1.31 RIP-Chip
PCS60YBR222C KAR1P11927 433 aa6.85□□□□□ -1.31
PCS60YBR222C MRM1P25270 412 aa6.85□□□□□ -1.31
PCS60YBR222C PPH3P32345 308 aa6.85□□□□□ -1.31
PCS60YBR222C MIF2P35201 549 aa6.85□□□□□ -1.31
PCS60YBR222C MSH4P40965 878 aaPredicted RBP6.85□□□□□ -1.31
PCS60YBR222C CEX1Q12453 761 aa6.85□□□□□ -1.31
PCS60YBR222C NKP1Q12493 238 aa6.85□□□□□ -1.31
PCS60YBR222C REV3P14284 1504 aa6.84□□□□□ -1.31
PCS60YBR222C MST1P07236 462 aa6.84□□□□□ -1.31
PCS60YBR222C RPL5P26321 297 aaKnown RBP6.84□□□□□ -1.31
PCS60YBR222C PPX1P38698 397 aa6.84□□□□□ -1.31
PCS60YBR222C PES4P39684 611 aa6.84□□□□□ -1.31
Retrieved 100 of 5,963 RNA–protein pairs in 11 ms