Protein–RNA interactions for Protein: Q06608

YPR172W, Pyridoxamine 5'-phosphate oxidase homolog, yeastyeast

Predictions only

Length 200 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YPR172WQ06608 YML009W-BYML009W-B 477 nt19.04■□□□□ 0.64
YPR172WQ06608 NSR1YGR159C 1245 nt18.93■□□□□ 0.62
YPR172WQ06608 NOP1YDL014W 984 nt18.57■□□□□ 0.56
YPR172WQ06608 YKL036CYKL036C 393 nt17.08■□□□□ 0.32
YPR172WQ06608 MDJ1YFL016C 1536 nt16.74■□□□□ 0.27
YPR172WQ06608 Q0297Q0297 156 nt16.18■□□□□ 0.18
YPR172WQ06608 SRX1YKL086W 384 nt16.16■□□□□ 0.18
YPR172WQ06608 YJL027CYJL027C 417 nt15.96■□□□□ 0.15
YPR172WQ06608 SCS3YGL126W 1143 nt15.48■□□□□ 0.07
YPR172WQ06608 YCR051WYCR051W 669 nt15.37■□□□□ 0.05
YPR172WQ06608 DBP2YNL112W 1641 nt14.77□□□□□ -0.05
YPR172WQ06608 YOL085CYOL085C 342 nt14.76□□□□□ -0.05
YPR172WQ06608 SSA3YBL075C 1950 nt14.74□□□□□ -0.05
YPR172WQ06608 TRN1tP(UGG)A 72 nt14.57□□□□□ -0.08
YPR172WQ06608 SUF9tP(UGG)F 72 nt14.57□□□□□ -0.08
YPR172WQ06608 SUF8tP(UGG)H 72 nt14.57□□□□□ -0.08
YPR172WQ06608 tP(UGG)LtP(UGG)L 72 nt14.57□□□□□ -0.08
YPR172WQ06608 SUF7tP(UGG)M 72 nt14.57□□□□□ -0.08
YPR172WQ06608 tP(UGG)N1tP(UGG)N1 72 nt14.57□□□□□ -0.08
YPR172WQ06608 tP(UGG)N2tP(UGG)N2 72 nt14.57□□□□□ -0.08
YPR172WQ06608 tP(UGG)O1tP(UGG)O1 72 nt14.57□□□□□ -0.08
YPR172WQ06608 SUF11tP(UGG)O2 72 nt14.57□□□□□ -0.08
YPR172WQ06608 PKP1YIL042C 1185 nt14.54□□□□□ -0.08
YPR172WQ06608 RPP1BYDL130W 321 nt14.53□□□□□ -0.08
YPR172WQ06608 CCC1YLR220W 969 nt14.49□□□□□ -0.09
YPR172WQ06608 YBR190WYBR190W 312 nt14.33□□□□□ -0.12
YPR172WQ06608 RTC3YHR087W 336 nt14.06□□□□□ -0.16
YPR172WQ06608 RVS167YDR388W 1449 nt14.04□□□□□ -0.16
YPR172WQ06608 ATS1YAL020C 1002 nt13.88□□□□□ -0.19
YPR172WQ06608 PET122YER153C 765 nt13.84□□□□□ -0.19
YPR172WQ06608 tP(UGG)O3tP(UGG)O3 72 nt13.82□□□□□ -0.2
YPR172WQ06608 SCR1SCR1 522 nt13.81□□□□□ -0.2
YPR172WQ06608 SCJ1YMR214W 1134 nt13.8□□□□□ -0.2
YPR172WQ06608 SHR5YOL110W 714 nt13.49□□□□□ -0.25
YPR172WQ06608 RRN5YLR141W 1092 nt13.48□□□□□ -0.25
YPR172WQ06608 YDJ1YNL064C 1230 nt13.38□□□□□ -0.27
YPR172WQ06608 SSA1YAL005C 1929 nt13.27□□□□□ -0.28
YPR172WQ06608 RSB1YOR049C 1065 nt13.22□□□□□ -0.29
YPR172WQ06608 YER088W-BYER088W-B 147 nt13.2□□□□□ -0.3
YPR172WQ06608 FPS1YLL043W 2010 nt13.12□□□□□ -0.31
YPR172WQ06608 URN1YPR152C 1398 nt13.11□□□□□ -0.31
YPR172WQ06608 GAR1YHR089C 618 nt13.09□□□□□ -0.31
YPR172WQ06608 DEP1YAL013W 1218 nt13.09□□□□□ -0.31
YPR172WQ06608 RPN10YHR200W 807 nt12.99□□□□□ -0.33
YPR172WQ06608 PUT4YOR348C 1884 nt12.93□□□□□ -0.34
YPR172WQ06608 YNL208WYNL208W 600 nt12.93□□□□□ -0.34
YPR172WQ06608 OPI9YLR338W 858 nt12.91□□□□□ -0.34
YPR172WQ06608 NVJ2YPR091C 2313 nt12.88□□□□□ -0.35
YPR172WQ06608 PST2YDR032C 597 nt12.84□□□□□ -0.35
YPR172WQ06608 SAH1YER043C 1350 nt12.81□□□□□ -0.36
YPR172WQ06608 PAC11YDR488C 1602 nt12.77□□□□□ -0.36
YPR172WQ06608 ARE1YCR048W 1833 nt12.7□□□□□ -0.38
YPR172WQ06608 TIR1YER011W 765 nt12.64□□□□□ -0.39
YPR172WQ06608 POA1YBR022W 534 nt12.59□□□□□ -0.39
YPR172WQ06608 PUN1YLR414C 792 nt12.58□□□□□ -0.4
YPR172WQ06608 YHR049C-AYHR049C-A 297 nt12.57□□□□□ -0.4
YPR172WQ06608 YJR018WYJR018W 363 nt12.53□□□□□ -0.4
YPR172WQ06608 PTC2YER089C 1395 nt12.4□□□□□ -0.42
YPR172WQ06608 YKL097CYKL097C 411 nt12.37□□□□□ -0.43
YPR172WQ06608 BUD23YCR047C 828 nt12.34□□□□□ -0.43
YPR172WQ06608 RPP2BYDR382W 333 nt12.33□□□□□ -0.44
YPR172WQ06608 SHU1YHL006C 453 nt12.3□□□□□ -0.44
YPR172WQ06608 BSC6YOL137W 1494 nt12.27□□□□□ -0.44
YPR172WQ06608 NAB2YGL122C 1578 nt12.26□□□□□ -0.45
YPR172WQ06608 YJR120WYJR120W 351 nt12.19□□□□□ -0.46
YPR172WQ06608 SSA4YER103W 1929 nt12.17□□□□□ -0.46
YPR172WQ06608 SRB2YHR041C 633 nt12.14□□□□□ -0.47
YPR172WQ06608 YAL037C-BYAL037C-B 975 nt12.13□□□□□ -0.47
YPR172WQ06608 INM2YDR287W 879 nt12.12□□□□□ -0.47
YPR172WQ06608 Q0182Q0182 405 nt12.09□□□□□ -0.47
YPR172WQ06608 FPR4YLR449W 1179 nt12.09□□□□□ -0.47
YPR172WQ06608 DAL1YIR027C 1383 nt12.08□□□□□ -0.48
YPR172WQ06608 WWM1YFL010C 636 nt12.05□□□□□ -0.48
YPR172WQ06608 YGR021WYGR021W 873 nt12.05□□□□□ -0.48
YPR172WQ06608 BDH2YAL061W 1254 nt12.02□□□□□ -0.49
YPR172WQ06608 FIS1YIL065C 468 nt11.97□□□□□ -0.49
YPR172WQ06608 YBL100CYBL100C 315 nt11.96□□□□□ -0.49
YPR172WQ06608 HOM6YJR139C 1080 nt11.94□□□□□ -0.5
YPR172WQ06608 PHO4YFR034C 939 nt11.93□□□□□ -0.5
YPR172WQ06608 BDF1YLR399C 2061 nt11.92□□□□□ -0.5
YPR172WQ06608 YFL021C-AYFL021C-A 855 nt11.9□□□□□ -0.5
YPR172WQ06608 LSM3YLR438C-A 270 nt11.89□□□□□ -0.51
YPR172WQ06608 MNP1YGL068W 585 nt11.85□□□□□ -0.51
YPR172WQ06608 TRM9YML014W 840 nt11.85□□□□□ -0.51
YPR172WQ06608 FUN26YAL022C 1554 nt11.81□□□□□ -0.52
YPR172WQ06608 NPL3YDR432W 1245 nt11.8□□□□□ -0.52
YPR172WQ06608 UME6YDR207C 2511 nt11.8□□□□□ -0.52
YPR172WQ06608 SPT5YML010W 3192 nt11.79□□□□□ -0.52
YPR172WQ06608 YOR139CYOR139C 393 nt11.79□□□□□ -0.52
YPR172WQ06608 RKM5YLR137W 1104 nt11.78□□□□□ -0.52
YPR172WQ06608 YOL037CYOL037C 354 nt11.73□□□□□ -0.53
YPR172WQ06608 ALF1YNL148C 765 nt11.71□□□□□ -0.53
YPR172WQ06608 RPM1RPM1 483 nt11.7□□□□□ -0.54
YPR172WQ06608 TAT1YBR069C 1860 nt11.7□□□□□ -0.54
YPR172WQ06608 YPS1YLR120C 1710 nt11.69□□□□□ -0.54
YPR172WQ06608 CCT6YDR188W 1641 nt11.66□□□□□ -0.54
YPR172WQ06608 SUF2tP(AGG)C 72 nt11.64□□□□□ -0.55
YPR172WQ06608 SUF10tP(AGG)N 72 nt11.64□□□□□ -0.55
YPR172WQ06608 YDR095CYDR095C 411 nt11.62□□□□□ -0.55
YPR172WQ06608 YHR165W-AYHR165W-A 312 nt11.62□□□□□ -0.55
Retrieved 100 of 7,029 protein–RNA pairs in 12.6 ms