Protein–RNA interactions for Protein: O13527

TY1B-A, Truncated transposon Ty1-A Gag-Pol polyprotein, yeastyeast

Known RBP Predictions only

Length 1,196 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
TY1B-AO13527 YML009W-BYML009W-B 477 nt23.13■■□□□ 1.29
TY1B-AO13527 NSR1YGR159C 1245 nt22.73■■□□□ 1.23
TY1B-AO13527 NOP1YDL014W 984 nt22.65■■□□□ 1.22
TY1B-AO13527 YKL036CYKL036C 393 nt21.11■□□□□ 0.97
TY1B-AO13527 MDJ1YFL016C 1536 nt19.86■□□□□ 0.77
TY1B-AO13527 Q0297Q0297 156 nt19.82■□□□□ 0.76
TY1B-AO13527 YJL027CYJL027C 417 nt19.79■□□□□ 0.76
TY1B-AO13527 SRX1YKL086W 384 nt19.72■□□□□ 0.75
TY1B-AO13527 SCS3YGL126W 1143 nt19.29■□□□□ 0.68
TY1B-AO13527 YCR051WYCR051W 669 nt18.79■□□□□ 0.6
TY1B-AO13527 YOL085CYOL085C 342 nt18.24■□□□□ 0.51
TY1B-AO13527 PKP1YIL042C 1185 nt17.95■□□□□ 0.46
TY1B-AO13527 RPP1BYDL130W 321 nt17.81■□□□□ 0.44
TY1B-AO13527 DBP2YNL112W 1641 nt17.61■□□□□ 0.41
TY1B-AO13527 TRN1tP(UGG)A 72 nt17.61■□□□□ 0.41
TY1B-AO13527 SUF9tP(UGG)F 72 nt17.61■□□□□ 0.41
TY1B-AO13527 SUF8tP(UGG)H 72 nt17.61■□□□□ 0.41
TY1B-AO13527 tP(UGG)LtP(UGG)L 72 nt17.61■□□□□ 0.41
TY1B-AO13527 SUF7tP(UGG)M 72 nt17.61■□□□□ 0.41
TY1B-AO13527 tP(UGG)N1tP(UGG)N1 72 nt17.61■□□□□ 0.41
TY1B-AO13527 tP(UGG)N2tP(UGG)N2 72 nt17.61■□□□□ 0.41
TY1B-AO13527 tP(UGG)O1tP(UGG)O1 72 nt17.61■□□□□ 0.41
TY1B-AO13527 SUF11tP(UGG)O2 72 nt17.61■□□□□ 0.41
TY1B-AO13527 CCC1YLR220W 969 nt17.55■□□□□ 0.4
TY1B-AO13527 SCJ1YMR214W 1134 nt17.48■□□□□ 0.39
TY1B-AO13527 ATS1YAL020C 1002 nt17.36■□□□□ 0.37
TY1B-AO13527 SCR1SCR1 522 nt16.97■□□□□ 0.31
TY1B-AO13527 PET122YER153C 765 nt16.95■□□□□ 0.3
TY1B-AO13527 YBR190WYBR190W 312 nt16.89■□□□□ 0.29
TY1B-AO13527 RVS167YDR388W 1449 nt16.81■□□□□ 0.28
TY1B-AO13527 tP(UGG)O3tP(UGG)O3 72 nt16.81■□□□□ 0.28
TY1B-AO13527 RTC3YHR087W 336 nt16.62■□□□□ 0.25
TY1B-AO13527 RRN5YLR141W 1092 nt16.54■□□□□ 0.24
TY1B-AO13527 RSB1YOR049C 1065 nt16.32■□□□□ 0.2
TY1B-AO13527 YDJ1YNL064C 1230 nt16.24■□□□□ 0.19
TY1B-AO13527 SHR5YOL110W 714 nt16.22■□□□□ 0.19
TY1B-AO13527 YER088W-BYER088W-B 147 nt16.19■□□□□ 0.18
TY1B-AO13527 PST2YDR032C 597 nt16■□□□□ 0.15
TY1B-AO13527 GAR1YHR089C 618 nt15.88■□□□□ 0.13
TY1B-AO13527 SSA3YBL075C 1950 nt15.77■□□□□ 0.12
TY1B-AO13527 DEP1YAL013W 1218 nt15.68■□□□□ 0.1
TY1B-AO13527 URN1YPR152C 1398 nt15.6■□□□□ 0.09
TY1B-AO13527 YKL097CYKL097C 411 nt15.59■□□□□ 0.09
TY1B-AO13527 RPN10YHR200W 807 nt15.5■□□□□ 0.07
TY1B-AO13527 YNL208WYNL208W 600 nt15.48■□□□□ 0.07
TY1B-AO13527 TIR1YER011W 765 nt15.31■□□□□ 0.04
TY1B-AO13527 SHU1YHL006C 453 nt15.28■□□□□ 0.04
TY1B-AO13527 OPI9YLR338W 858 nt15.28■□□□□ 0.04
TY1B-AO13527 SAH1YER043C 1350 nt15.11■□□□□ 0.01
TY1B-AO13527 PUT4YOR348C 1884 nt15.03■□□□□ -0
TY1B-AO13527 SSA1YAL005C 1929 nt15.01□□□□□ -0.01
TY1B-AO13527 YAL037C-BYAL037C-B 975 nt14.99□□□□□ -0.01
TY1B-AO13527 YJR018WYJR018W 363 nt14.91□□□□□ -0.02
TY1B-AO13527 PUN1YLR414C 792 nt14.89□□□□□ -0.03
TY1B-AO13527 ARE1YCR048W 1833 nt14.86□□□□□ -0.03
TY1B-AO13527 YOR139CYOR139C 393 nt14.81□□□□□ -0.04
TY1B-AO13527 RPP2BYDR382W 333 nt14.76□□□□□ -0.05
TY1B-AO13527 NPL3YDR432W 1245 nt14.75□□□□□ -0.05
TY1B-AO13527 SRB2YHR041C 633 nt14.72□□□□□ -0.05
TY1B-AO13527 YHR049C-AYHR049C-A 297 nt14.72□□□□□ -0.05
TY1B-AO13527 YGR021WYGR021W 873 nt14.71□□□□□ -0.05
TY1B-AO13527 POA1YBR022W 534 nt14.68□□□□□ -0.06
TY1B-AO13527 WWM1YFL010C 636 nt14.66□□□□□ -0.06
TY1B-AO13527 PTC2YER089C 1395 nt14.64□□□□□ -0.07
TY1B-AO13527 HOM6YJR139C 1080 nt14.61□□□□□ -0.07
TY1B-AO13527 YJR120WYJR120W 351 nt14.58□□□□□ -0.08
TY1B-AO13527 MNP1YGL068W 585 nt14.57□□□□□ -0.08
TY1B-AO13527 YOL037CYOL037C 354 nt14.49□□□□□ -0.09
TY1B-AO13527 BUD23YCR047C 828 nt14.48□□□□□ -0.09
TY1B-AO13527 YFL021C-AYFL021C-A 855 nt14.44□□□□□ -0.1
TY1B-AO13527 BDH2YAL061W 1254 nt14.43□□□□□ -0.1
TY1B-AO13527 NAB2YGL122C 1578 nt14.42□□□□□ -0.1
TY1B-AO13527 RKM5YLR137W 1104 nt14.41□□□□□ -0.1
TY1B-AO13527 INM2YDR287W 879 nt14.37□□□□□ -0.11
TY1B-AO13527 FPR4YLR449W 1179 nt14.33□□□□□ -0.12
TY1B-AO13527 LSM3YLR438C-A 270 nt14.32□□□□□ -0.12
TY1B-AO13527 DAL1YIR027C 1383 nt14.28□□□□□ -0.12
TY1B-AO13527 BSC6YOL137W 1494 nt14.26□□□□□ -0.13
TY1B-AO13527 tM(CAU)CtM(CAU)C 72 nt14.25□□□□□ -0.13
TY1B-AO13527 IMT4tM(CAU)E 72 nt14.25□□□□□ -0.13
TY1B-AO13527 IMT3tM(CAU)J3 72 nt14.25□□□□□ -0.13
TY1B-AO13527 IMT1tM(CAU)O1 72 nt14.25□□□□□ -0.13
TY1B-AO13527 IMT2tM(CAU)P 72 nt14.25□□□□□ -0.13
TY1B-AO13527 YBL100CYBL100C 315 nt14.25□□□□□ -0.13
TY1B-AO13527 TRM9YML014W 840 nt14.18□□□□□ -0.14
TY1B-AO13527 FIS1YIL065C 468 nt14.13□□□□□ -0.15
TY1B-AO13527 PUS2YGL063W 1113 nt14.12□□□□□ -0.15
TY1B-AO13527 PHO4YFR034C 939 nt14.11□□□□□ -0.15
TY1B-AO13527 YLR281CYLR281C 468 nt14.11□□□□□ -0.15
TY1B-AO13527 FUN26YAL022C 1554 nt14.08□□□□□ -0.16
TY1B-AO13527 WHI5YOR083W 888 nt14.05□□□□□ -0.16
TY1B-AO13527 CCT6YDR188W 1641 nt13.92□□□□□ -0.18
TY1B-AO13527 ALF1YNL148C 765 nt13.9□□□□□ -0.18
TY1B-AO13527 SUF2tP(AGG)C 72 nt13.88□□□□□ -0.19
TY1B-AO13527 SUF10tP(AGG)N 72 nt13.88□□□□□ -0.19
TY1B-AO13527 YLR154C-GYLR154C-G 150 nt13.83□□□□□ -0.2
TY1B-AO13527 MOT3YMR070W 1473 nt13.8□□□□□ -0.2
TY1B-AO13527 DSK2YMR276W 1122 nt13.79□□□□□ -0.2
TY1B-AO13527 IMP2'YIL154C 1041 nt13.78□□□□□ -0.2
TY1B-AO13527 FMP45YDL222C 930 nt13.75□□□□□ -0.21
Retrieved 100 of 7,029 protein–RNA pairs in 15.7 ms