RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W ENP1P38333 483 aaKnown RBP3.23□□□□□ -1.89
NUP170YBL079W LAM6Q08001 693 aa3.23□□□□□ -1.89
NUP170YBL079W RAD9P14737 1309 aa3.23□□□□□ -1.89
NUP170YBL079W YNR029CP53729 429 aaKnown RBP3.23□□□□□ -1.89
NUP170YBL079W IKI3Q06706 1349 aaKnown RBP3.23□□□□□ -1.89
NUP170YBL079W RRT14P40470 206 aa3.23□□□□□ -1.89
NUP170YBL079W MEC3Q02574 474 aa3.23□□□□□ -1.89
NUP170YBL079W RAV1P47104 1357 aa3.22□□□□□ -1.89
NUP170YBL079W RIA1P53893 1110 aa3.22□□□□□ -1.89
NUP170YBL079W ALD3P54114 506 aa3.22□□□□□ -1.89
NUP170YBL079W YFR016CP43597 1233 aaKnown RBP3.21□□□□□ -1.89
NUP170YBL079W ESL2P36168 1195 aa3.21□□□□□ -1.9
NUP170YBL079W YRF1-2P40105 1681 aa3.2□□□□□ -1.9
NUP170YBL079W TAF5P38129 798 aa3.2□□□□□ -1.9
NUP170YBL079W ENV9Q08651 330 aa3.2□□□□□ -1.9
NUP170YBL079W RTC1Q08281 1341 aa3.19□□□□□ -1.9
NUP170YBL079W SSA1P10591 642 aaKnown RBP3.19□□□□□ -1.9
NUP170YBL079W MDG1P53885 366 aa3.19□□□□□ -1.9
NUP170YBL079W BUD31P25337 157 aaPredicted RBP3.18□□□□□ -1.9
NUP170YBL079W NUP192P47054 1683 aa3.17□□□□□ -1.9
NUP170YBL079W RTF1P53064 558 aa3.17□□□□□ -1.9
NUP170YBL079W ENT1Q12518 454 aa3.17□□□□□ -1.9
NUP170YBL079W USO1P25386 1790 aa3.17□□□□□ -1.9
NUP170YBL079W BDF1P35817 686 aa3.17□□□□□ -1.9
NUP170YBL079W SAP155P43612 1002 aa3.17□□□□□ -1.9
NUP170YBL079W ALD4P46367 519 aaKnown RBP3.17□□□□□ -1.9
NUP170YBL079W RSF2P46974 1380 aa3.17□□□□□ -1.9
NUP170YBL079W PSK1P31374 1356 aa3.16□□□□□ -1.9
NUP170YBL079W YLL066CQ99208 1374 aa3.16□□□□□ -1.9
NUP170YBL079W REB1P21538 810 aa3.16□□□□□ -1.9
NUP170YBL079W YIL177CP40434 1758 aa3.15□□□□□ -1.9
NUP170YBL079W YJL225CP40889 1758 aa3.15□□□□□ -1.9
NUP170YBL079W TCB1Q12466 1186 aa3.15□□□□□ -1.9
NUP170YBL079W SSA2P10592 639 aaKnown RBP3.15□□□□□ -1.91
NUP170YBL079W MTR4P47047 1073 aaKnown RBP3.15□□□□□ -1.91
NUP170YBL079W DIB1Q06819 143 aaPredicted RBP3.14□□□□□ -1.91
NUP170YBL079W ADE6P38972 1358 aaKnown RBP3.14□□□□□ -1.91
NUP170YBL079W PEX21P50091 288 aa3.13□□□□□ -1.91
NUP170YBL079W BUG1Q12191 341 aa3.13□□□□□ -1.91
NUP170YBL079W IES2P40154 320 aa3.13□□□□□ -1.91
NUP170YBL079W UTP22P53254 1237 aaPredicted RBP3.13□□□□□ -1.91
NUP170YBL079W PRP5P21372 849 aaPredicted RBP3.13□□□□□ -1.91
NUP170YBL079W CTF4Q01454 927 aa3.12□□□□□ -1.91
NUP170YBL079W KRE5P22023 1365 aa3.12□□□□□ -1.91
NUP170YBL079W TYS1P36421 394 aaKnown RBP3.12□□□□□ -1.91
NUP170YBL079W YBL086CP38177 466 aa3.12□□□□□ -1.91
NUP170YBL079W CHZ1P40019 153 aaPredicted RBP3.12□□□□□ -1.91
NUP170YBL079W GRX1P25373 110 aaKnown RBP3.12□□□□□ -1.91
NUP170YBL079W SIR4P11978 1358 aa3.11□□□□□ -1.91
NUP170YBL079W PRP43P53131 767 aaKnown RBP3.11□□□□□ -1.91
NUP170YBL079W GRX4P32642 244 aa3.11□□□□□ -1.91
NUP170YBL079W RRP5Q05022 1729 aaKnown RBP3.11□□□□□ -1.91
NUP170YBL079W CTT1P06115 562 aa3.1□□□□□ -1.91
NUP170YBL079W PRP45P28004 379 aaPredicted RBP3.1□□□□□ -1.91
NUP170YBL079W TY3B-IQ7LHG5 1498 aaKnown RBP3.1□□□□□ -1.91
NUP170YBL079W UBX2Q04228 584 aa3.09□□□□□ -1.91
NUP170YBL079W RAD4P14736 754 aa3.09□□□□□ -1.91
NUP170YBL079W MSB4Q12317 492 aa3.09□□□□□ -1.91
NUP170YBL079W LEU2P04173 364 aaPredicted RBP3.09□□□□□ -1.92
NUP170YBL079W PDI1P17967 522 aaKnown RBP3.08□□□□□ -1.92
NUP170YBL079W YKL222CP35995 705 aa3.08□□□□□ -1.92
NUP170YBL079W CPS1P27614 576 aa3.08□□□□□ -1.92
NUP170YBL079W APP1P53933 587 aa3.08□□□□□ -1.92
NUP170YBL079W ATG13Q06628 738 aa3.08□□□□□ -1.92
NUP170YBL079W GRX6Q12438 231 aa3.08□□□□□ -1.92
NUP170YBL079W YKL133CP36066 463 aa3.07□□□□□ -1.92
NUP170YBL079W YER156CP40093 338 aaKnown RBP3.07□□□□□ -1.92
NUP170YBL079W SLM3Q12093 417 aa3.07□□□□□ -1.92
NUP170YBL079W GLC3P32775 704 aa3.07□□□□□ -1.92
NUP170YBL079W TIF4632P39936 914 aaKnown RBP3.07□□□□□ -1.92
NUP170YBL079W CAB1Q04430 367 aa3.07□□□□□ -1.92
NUP170YBL079W YRF1-4O13559 1382 aa3.06□□□□□ -1.92
NUP170YBL079W CSE4P36012 229 aa3.06□□□□□ -1.92
NUP170YBL079W SEC3P33332 1336 aaKnown RBP3.05□□□□□ -1.92
NUP170YBL079W FPK1P53739 893 aa3.05□□□□□ -1.92
NUP170YBL079W RSC30P38781 883 aa3.05□□□□□ -1.92
NUP170YBL079W RRD1P40454 393 aaKnown RBP3.05□□□□□ -1.92
NUP170YBL079W HPC2Q01448 625 aa3.05□□□□□ -1.92
NUP170YBL079W TAF8Q03750 510 aa3.05□□□□□ -1.92
NUP170YBL079W RPN11P43588 306 aaKnown RBP3.04□□□□□ -1.92
NUP170YBL079W XKS1P42826 600 aa3.04□□□□□ -1.92
NUP170YBL079W NST1P53935 1240 aa3.04□□□□□ -1.92
NUP170YBL079W PSF3Q12146 194 aa3.04□□□□□ -1.92
NUP170YBL079W SUP35P05453 685 aaKnown RBP3.04□□□□□ -1.92
NUP170YBL079W DAL5P15365 543 aa3.04□□□□□ -1.92
NUP170YBL079W AAD16Q02895 342 aa3.04□□□□□ -1.92
NUP170YBL079W SRF1Q12516 437 aa3.04□□□□□ -1.92
NUP170YBL079W SPE2P21182 396 aa3.03□□□□□ -1.92
NUP170YBL079W SSK22P25390 1331 aaPredicted RBP3.03□□□□□ -1.92
NUP170YBL079W BSD2P38356 321 aa3.03□□□□□ -1.92
NUP170YBL079W TAP42Q04372 366 aa3.03□□□□□ -1.92
NUP170YBL079W RAT1Q02792 1006 aaKnown RBP3.03□□□□□ -1.92
NUP170YBL079W RPG1P38249 964 aaKnown RBP3.03□□□□□ -1.92
NUP170YBL079W MSN5P52918 1224 aa3.03□□□□□ -1.92
NUP170YBL079W PFF1P38244 976 aa3.02□□□□□ -1.93
NUP170YBL079W LEO1P38439 464 aa3.02□□□□□ -1.93
NUP170YBL079W MHP1P43638 1398 aa3.02□□□□□ -1.93
NUP170YBL079W CRF1Q04930 467 aa3.02□□□□□ -1.93
NUP170YBL079W TYW1Q08960 810 aaKnown RBP3.02□□□□□ -1.93
NUP170YBL079W EAR1Q03212 550 aa3.01□□□□□ -1.93
Retrieved 100 of 5,963 RNA–protein pairs in 6.4 ms