Protein–RNA interactions for Protein: Q02792

RAT1, 5'-3' exoribonuclease 2, yeastyeast

Known RBP Predictions only

Length 1,006 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RAT1Q02792 YML009W-BYML009W-B 477 nt25.46■■□□□ 1.67
RAT1Q02792 NOP1YDL014W 984 nt24.94■■□□□ 1.58
RAT1Q02792 NSR1YGR159C 1245 nt24.81■■□□□ 1.56
RAT1Q02792 YKL036CYKL036C 393 nt23.47■■□□□ 1.35
RAT1Q02792 YJL027CYJL027C 417 nt22.02■■□□□ 1.12
RAT1Q02792 Q0297Q0297 156 nt21.95■■□□□ 1.1
RAT1Q02792 SRX1YKL086W 384 nt21.77■■□□□ 1.08
RAT1Q02792 SCS3YGL126W 1143 nt21.6■■□□□ 1.05
RAT1Q02792 MDJ1YFL016C 1536 nt21.58■■□□□ 1.04
RAT1Q02792 YCR051WYCR051W 669 nt20.74■□□□□ 0.91
RAT1Q02792 YOL085CYOL085C 342 nt20.28■□□□□ 0.84
RAT1Q02792 PKP1YIL042C 1185 nt19.96■□□□□ 0.79
RAT1Q02792 SCJ1YMR214W 1134 nt19.74■□□□□ 0.75
RAT1Q02792 RPP1BYDL130W 321 nt19.71■□□□□ 0.75
RAT1Q02792 ATS1YAL020C 1002 nt19.45■□□□□ 0.7
RAT1Q02792 TRN1tP(UGG)A 72 nt19.37■□□□□ 0.69
RAT1Q02792 SUF9tP(UGG)F 72 nt19.37■□□□□ 0.69
RAT1Q02792 SUF8tP(UGG)H 72 nt19.37■□□□□ 0.69
RAT1Q02792 tP(UGG)LtP(UGG)L 72 nt19.37■□□□□ 0.69
RAT1Q02792 SUF7tP(UGG)M 72 nt19.37■□□□□ 0.69
RAT1Q02792 tP(UGG)N1tP(UGG)N1 72 nt19.37■□□□□ 0.69
RAT1Q02792 tP(UGG)N2tP(UGG)N2 72 nt19.37■□□□□ 0.69
RAT1Q02792 tP(UGG)O1tP(UGG)O1 72 nt19.37■□□□□ 0.69
RAT1Q02792 SUF11tP(UGG)O2 72 nt19.37■□□□□ 0.69
RAT1Q02792 CCC1YLR220W 969 nt19.24■□□□□ 0.67
RAT1Q02792 DBP2YNL112W 1641 nt19.24■□□□□ 0.67
RAT1Q02792 PET122YER153C 765 nt18.78■□□□□ 0.6
RAT1Q02792 SCR1SCR1 522 nt18.76■□□□□ 0.59
RAT1Q02792 tP(UGG)O3tP(UGG)O3 72 nt18.51■□□□□ 0.55
RAT1Q02792 RRN5YLR141W 1092 nt18.29■□□□□ 0.52
RAT1Q02792 RVS167YDR388W 1449 nt18.29■□□□□ 0.52
RAT1Q02792 YBR190WYBR190W 312 nt18.25■□□□□ 0.51
RAT1Q02792 RSB1YOR049C 1065 nt18.1■□□□□ 0.49
RAT1Q02792 RTC3YHR087W 336 nt18.01■□□□□ 0.47
RAT1Q02792 YER088W-BYER088W-B 147 nt17.93■□□□□ 0.46
RAT1Q02792 PST2YDR032C 597 nt17.91■□□□□ 0.46
RAT1Q02792 YDJ1YNL064C 1230 nt17.89■□□□□ 0.45
RAT1Q02792 SHR5YOL110W 714 nt17.74■□□□□ 0.43
RAT1Q02792 YKL097CYKL097C 411 nt17.52■□□□□ 0.4
RAT1Q02792 GAR1YHR089C 618 nt17.45■□□□□ 0.38
RAT1Q02792 DEP1YAL013W 1218 nt17.1■□□□□ 0.33
RAT1Q02792 SHU1YHL006C 453 nt17.08■□□□□ 0.32
RAT1Q02792 URN1YPR152C 1398 nt16.95■□□□□ 0.3
RAT1Q02792 YNL208WYNL208W 600 nt16.87■□□□□ 0.29
RAT1Q02792 RPN10YHR200W 807 nt16.84■□□□□ 0.29
RAT1Q02792 TIR1YER011W 765 nt16.83■□□□□ 0.28
RAT1Q02792 YAL037C-BYAL037C-B 975 nt16.69■□□□□ 0.26
RAT1Q02792 YOR139CYOR139C 393 nt16.68■□□□□ 0.26
RAT1Q02792 OPI9YLR338W 858 nt16.57■□□□□ 0.24
RAT1Q02792 SSA1YAL005C 1929 nt16.49■□□□□ 0.23
RAT1Q02792 NPL3YDR432W 1245 nt16.49■□□□□ 0.23
RAT1Q02792 SAH1YER043C 1350 nt16.35■□□□□ 0.21
RAT1Q02792 SRB2YHR041C 633 nt16.28■□□□□ 0.2
RAT1Q02792 YGR021WYGR021W 873 nt16.24■□□□□ 0.19
RAT1Q02792 MNP1YGL068W 585 nt16.2■□□□□ 0.18
RAT1Q02792 YJR018WYJR018W 363 nt16.2■□□□□ 0.18
RAT1Q02792 HOM6YJR139C 1080 nt16.18■□□□□ 0.18
RAT1Q02792 WWM1YFL010C 636 nt16.17■□□□□ 0.18
RAT1Q02792 PUT4YOR348C 1884 nt16.14■□□□□ 0.17
RAT1Q02792 YOL037CYOL037C 354 nt16.13■□□□□ 0.17
RAT1Q02792 PUN1YLR414C 792 nt16.12■□□□□ 0.17
RAT1Q02792 RPP2BYDR382W 333 nt16.04■□□□□ 0.16
RAT1Q02792 ARE1YCR048W 1833 nt16.03■□□□□ 0.16
RAT1Q02792 tM(CAU)CtM(CAU)C 72 nt16■□□□□ 0.15
RAT1Q02792 IMT4tM(CAU)E 72 nt16■□□□□ 0.15
RAT1Q02792 IMT3tM(CAU)J3 72 nt16■□□□□ 0.15
RAT1Q02792 IMT1tM(CAU)O1 72 nt16■□□□□ 0.15
RAT1Q02792 IMT2tM(CAU)P 72 nt16■□□□□ 0.15
RAT1Q02792 YJR120WYJR120W 351 nt15.99■□□□□ 0.15
RAT1Q02792 RKM5YLR137W 1104 nt15.95■□□□□ 0.14
RAT1Q02792 YFL021C-AYFL021C-A 855 nt15.9■□□□□ 0.14
RAT1Q02792 YHR049C-AYHR049C-A 297 nt15.86■□□□□ 0.13
RAT1Q02792 PTC2YER089C 1395 nt15.83■□□□□ 0.12
RAT1Q02792 BDH2YAL061W 1254 nt15.77■□□□□ 0.12
RAT1Q02792 PUS2YGL063W 1113 nt15.74■□□□□ 0.11
RAT1Q02792 POA1YBR022W 534 nt15.73■□□□□ 0.11
RAT1Q02792 YLR281CYLR281C 468 nt15.69■□□□□ 0.1
RAT1Q02792 SSA3YBL075C 1950 nt15.68■□□□□ 0.1
RAT1Q02792 LSM3YLR438C-A 270 nt15.64■□□□□ 0.09
RAT1Q02792 MOT3YMR070W 1473 nt15.59■□□□□ 0.09
RAT1Q02792 WHI5YOR083W 888 nt15.58■□□□□ 0.08
RAT1Q02792 BUD23YCR047C 828 nt15.57■□□□□ 0.08
RAT1Q02792 INM2YDR287W 879 nt15.55■□□□□ 0.08
RAT1Q02792 NAB2YGL122C 1578 nt15.54■□□□□ 0.08
RAT1Q02792 YBL100CYBL100C 315 nt15.5■□□□□ 0.07
RAT1Q02792 FPR4YLR449W 1179 nt15.48■□□□□ 0.07
RAT1Q02792 DAL1YIR027C 1383 nt15.45■□□□□ 0.06
RAT1Q02792 TRM9YML014W 840 nt15.4■□□□□ 0.06
RAT1Q02792 BSC6YOL137W 1494 nt15.4■□□□□ 0.06
RAT1Q02792 FMP45YDL222C 930 nt15.35■□□□□ 0.05
RAT1Q02792 FIS1YIL065C 468 nt15.35■□□□□ 0.05
RAT1Q02792 DSK2YMR276W 1122 nt15.32■□□□□ 0.04
RAT1Q02792 FUN26YAL022C 1554 nt15.32■□□□□ 0.04
RAT1Q02792 PHO4YFR034C 939 nt15.29■□□□□ 0.04
RAT1Q02792 IMP2'YIL154C 1041 nt15.25■□□□□ 0.03
RAT1Q02792 YPR011CYPR011C 981 nt15.25■□□□□ 0.03
RAT1Q02792 YLR154C-GYLR154C-G 150 nt15.23■□□□□ 0.03
RAT1Q02792 YLR236CYLR236C 324 nt15.22■□□□□ 0.03
RAT1Q02792 YCH1YGR203W 447 nt15.21■□□□□ 0.03
RAT1Q02792 CCT6YDR188W 1641 nt15.18■□□□□ 0.02
Retrieved 100 of 7,029 protein–RNA pairs in 13.2 ms