RNA–Protein interactions for RNA: YBL079W

NUP170, Transcript of Subunit of the inner ring of the nuclear pore complex (NPC), yeastyeast

Gene NUP170, Length 4,509 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP170YBL079W INO80P53115 1489 aa4.59□□□□□ -1.67
NUP170YBL079W MON2P48563 1636 aaPredicted RBP4.58□□□□□ -1.68
NUP170YBL079W TCB3Q03640 1545 aaKnown RBP4.48□□□□□ -1.69
NUP170YBL079W KOG1P38873 1557 aa4.44□□□□□ -1.7
NUP170YBL079W SWR1Q05471 1514 aa4.32□□□□□ -1.72
NUP170YBL079W RSE1Q04693 1361 aaKnown RBP4.28□□□□□ -1.72
NUP170YBL079W DNA2P38859 1522 aa4.28□□□□□ -1.72
NUP170YBL079W TOM1Q03280 3268 aa4.27□□□□□ -1.73
NUP170YBL079W TY1B-DR4Q07793 1604 aa4.24□□□□□ -1.73
NUP170YBL079W SPA2P23201 1466 aaKnown RBP4.24□□□□□ -1.73
NUP170YBL079W SGS1P35187 1447 aa4.21□□□□□ -1.74
NUP170YBL079W THO2P53552 1597 aaKnown RBP4.2□□□□□ -1.74
NUP170YBL079W SPT6P23615 1451 aaKnown RBP4.17□□□□□ -1.74
NUP170YBL079W MTC1P47018 478 aaKnown RBP4.13□□□□□ -1.75
NUP170YBL079W BUD4P47136 1447 aa4.13□□□□□ -1.75
NUP170YBL079W HSL1P34244 1518 aa4.11□□□□□ -1.75
NUP170YBL079W MDS3P53094 1487 aa4.03□□□□□ -1.76
NUP170YBL079W SSK2P53599 1579 aa4.02□□□□□ -1.77
NUP170YBL079W ECM5Q03214 1411 aa4.01□□□□□ -1.77
NUP170YBL079W REV3P14284 1504 aa4□□□□□ -1.77
NUP170YBL079W HIR3P47171 1648 aa4□□□□□ -1.77
NUP170YBL079W SIN3P22579 1536 aa3.99□□□□□ -1.77
NUP170YBL079W BPT1P14772 1559 aa3.97□□□□□ -1.77
NUP170YBL079W PEP1P32319 1579 aa3.95□□□□□ -1.78
NUP170YBL079W MIF2P35201 549 aa3.94□□□□□ -1.78
NUP170YBL079W LTE1P07866 1435 aa3.94□□□□□ -1.78
NUP170YBL079W MYO2P19524 1574 aaKnown RBP3.93□□□□□ -1.78
NUP170YBL079W XRN1P22147 1528 aaKnown RBP3.92□□□□□ -1.78
NUP170YBL079W MET5P47169 1442 aa3.92□□□□□ -1.78
NUP170YBL079W YCF1P39109 1515 aaKnown RBP3.92□□□□□ -1.78
NUP170YBL079W TAF2P23255 1407 aa3.9□□□□□ -1.78
NUP170YBL079W GEA2P39993 1459 aaKnown RBP3.87□□□□□ -1.79
NUP170YBL079W ESC1Q03661 1658 aaKnown RBP3.86□□□□□ -1.79
NUP170YBL079W SKI3P17883 1432 aaKnown RBP3.86□□□□□ -1.79
NUP170YBL079W DRS1P32892 752 aaKnown RBP3.85□□□□□ -1.79
NUP170YBL079W ATG2P53855 1592 aa3.85□□□□□ -1.79
NUP170YBL079W SSN2P38931 1420 aa3.85□□□□□ -1.79
NUP170YBL079W ESP1Q03018 1630 aa3.84□□□□□ -1.79
NUP170YBL079W YPK9Q12697 1472 aa3.84□□□□□ -1.79
NUP170YBL079W TRM732Q03496 1420 aa3.8□□□□□ -1.8
NUP170YBL079W RKR1Q04781 1562 aa3.8□□□□□ -1.8
NUP170YBL079W DNF1P32660 1571 aa3.8□□□□□ -1.8
NUP170YBL079W DRS2P39524 1355 aa3.79□□□□□ -1.8
NUP170YBL079W RPO31P04051 1460 aa3.79□□□□□ -1.8
NUP170YBL079W TRM3Q07527 1436 aa3.79□□□□□ -1.8
NUP170YBL079W TOP2P06786 1428 aaKnown RBP3.78□□□□□ -1.8
NUP170YBL079W UFD4P33202 1483 aa3.78□□□□□ -1.8
NUP170YBL079W CHD1P32657 1468 aa3.78□□□□□ -1.81
NUP170YBL079W CDC25P04821 1589 aa3.77□□□□□ -1.81
NUP170YBL079W PAN1P32521 1480 aa3.77□□□□□ -1.81
NUP170YBL079W SMC4Q12267 1418 aa3.76□□□□□ -1.81
NUP170YBL079W TAF7Q05021 590 aa3.76□□□□□ -1.81
NUP170YBL079W SCC2Q04002 1493 aa3.75□□□□□ -1.81
NUP170YBL079W RPA190P10964 1664 aaKnown RBP3.75□□□□□ -1.81
NUP170YBL079W STU1P38198 1513 aa3.75□□□□□ -1.81
NUP170YBL079W STH1P32597 1359 aa3.75□□□□□ -1.81
NUP170YBL079W MMS22Q06164 1454 aa3.74□□□□□ -1.81
NUP170YBL079W MMS1Q06211 1407 aa3.73□□□□□ -1.81
NUP170YBL079W BUD3P25558 1636 aa3.73□□□□□ -1.81
NUP170YBL079W URN1Q06525 465 aaKnown RBP3.72□□□□□ -1.81
NUP170YBL079W ABP1P15891 592 aaKnown RBP3.71□□□□□ -1.81
NUP170YBL079W RQC2Q12532 1038 aaKnown RBP3.71□□□□□ -1.81
NUP170YBL079W MYO4P32492 1471 aa3.71□□□□□ -1.82
NUP170YBL079W YTA7P40340 1379 aa3.7□□□□□ -1.82
NUP170YBL079W VPS15P22219 1454 aa3.7□□□□□ -1.82
NUP170YBL079W POL1P13382 1468 aa3.69□□□□□ -1.82
NUP170YBL079W NUP159P40477 1460 aa3.69□□□□□ -1.82
NUP170YBL079W NUP170P38181 1502 aa3.68□□□□□ -1.82
NUP170YBL079W YOR1P53049 1477 aa3.68□□□□□ -1.82
NUP170YBL079W SPP41P38904 1435 aa3.67□□□□□ -1.82
NUP170YBL079W TRA1P38811 3744 aa3.67□□□□□ -1.82
NUP170YBL079W SNT2P53127 1403 aa3.67□□□□□ -1.82
NUP170YBL079W RTT106P40161 455 aa3.65□□□□□ -1.83
NUP170YBL079W YFR006WP43590 535 aa3.64□□□□□ -1.83
NUP170YBL079W IRC20Q06554 1556 aa3.64□□□□□ -1.83
NUP170YBL079W TSC11P40061 1430 aa3.64□□□□□ -1.83
NUP170YBL079W MET10P39692 1035 aa3.63□□□□□ -1.83
NUP170YBL079W YOR093CQ12275 1648 aa3.62□□□□□ -1.83
NUP170YBL079W VTH1P40438 1549 aa3.62□□□□□ -1.83
NUP170YBL079W VTH2P40890 1549 aa3.62□□□□□ -1.83
NUP170YBL079W NTE1Q04958 1679 aa3.62□□□□□ -1.83
NUP170YBL079W IQG1Q12280 1495 aa3.61□□□□□ -1.83
NUP170YBL079W SCT1P32784 759 aa3.6□□□□□ -1.83
NUP170YBL079W BNR1P40450 1375 aa3.6□□□□□ -1.83
NUP170YBL079W PDR12Q02785 1511 aa3.59□□□□□ -1.83
NUP170YBL079W CAT8P39113 1433 aa3.59□□□□□ -1.83
NUP170YBL079W DOP1Q03921 1698 aa3.59□□□□□ -1.84
NUP170YBL079W ULS1Q08562 1619 aa3.58□□□□□ -1.84
NUP170YBL079W RPO21P04050 1733 aaKnown RBP3.58□□□□□ -1.84
NUP170YBL079W HAP1P0CE41 1502 aa3.58□□□□□ -1.84
NUP170YBL079W VPS13Q07878 3144 aa3.58□□□□□ -1.84
NUP170YBL079W DNF2Q12675 1612 aa3.57□□□□□ -1.84
NUP170YBL079W GDB1Q06625 1536 aa3.57□□□□□ -1.84
NUP170YBL079W PDR10P51533 1564 aa3.57□□□□□ -1.84
NUP170YBL079W MLP2P40457 1679 aa3.56□□□□□ -1.84
NUP170YBL079W EDE1P34216 1381 aa3.56□□□□□ -1.84
NUP170YBL079W YMR196WQ04336 1088 aa3.56□□□□□ -1.84
NUP170YBL079W ITT1Q04638 464 aa3.56□□□□□ -1.84
NUP170YBL079W TY1B-BRQ12193 1756 aa3.56□□□□□ -1.84
NUP170YBL079W TY1B-GR3Q12316 1755 aa3.56□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms