Protein–RNA interactions for Protein: P11978

SIR4, Regulatory protein SIR4, yeastyeast

Predictions only

Length 1,358 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SIR4P11978 YML009W-BYML009W-B 477 nt26.72■■□□□ 1.87
SIR4P11978 NOP1YDL014W 984 nt25.97■■□□□ 1.75
SIR4P11978 NSR1YGR159C 1245 nt25.89■■□□□ 1.74
SIR4P11978 YKL036CYKL036C 393 nt24.47■■□□□ 1.51
SIR4P11978 YJL027CYJL027C 417 nt22.98■■□□□ 1.27
SIR4P11978 Q0297Q0297 156 nt22.88■■□□□ 1.25
SIR4P11978 MDJ1YFL016C 1536 nt22.87■■□□□ 1.25
SIR4P11978 SRX1YKL086W 384 nt22.72■■□□□ 1.23
SIR4P11978 SCS3YGL126W 1143 nt22.58■■□□□ 1.21
SIR4P11978 YCR051WYCR051W 669 nt21.71■■□□□ 1.07
SIR4P11978 YOL085CYOL085C 342 nt21.14■□□□□ 0.98
SIR4P11978 PKP1YIL042C 1185 nt20.92■□□□□ 0.94
SIR4P11978 RPP1BYDL130W 321 nt20.56■□□□□ 0.88
SIR4P11978 SCJ1YMR214W 1134 nt20.38■□□□□ 0.85
SIR4P11978 TRN1tP(UGG)A 72 nt20.33■□□□□ 0.84
SIR4P11978 SUF9tP(UGG)F 72 nt20.33■□□□□ 0.84
SIR4P11978 SUF8tP(UGG)H 72 nt20.33■□□□□ 0.84
SIR4P11978 tP(UGG)LtP(UGG)L 72 nt20.33■□□□□ 0.84
SIR4P11978 SUF7tP(UGG)M 72 nt20.33■□□□□ 0.84
SIR4P11978 tP(UGG)N1tP(UGG)N1 72 nt20.33■□□□□ 0.84
SIR4P11978 tP(UGG)N2tP(UGG)N2 72 nt20.33■□□□□ 0.84
SIR4P11978 tP(UGG)O1tP(UGG)O1 72 nt20.33■□□□□ 0.84
SIR4P11978 SUF11tP(UGG)O2 72 nt20.33■□□□□ 0.84
SIR4P11978 DBP2YNL112W 1641 nt20.23■□□□□ 0.83
SIR4P11978 ATS1YAL020C 1002 nt20.22■□□□□ 0.83
SIR4P11978 CCC1YLR220W 969 nt20.19■□□□□ 0.82
SIR4P11978 PET122YER153C 765 nt19.69■□□□□ 0.74
SIR4P11978 SCR1SCR1 522 nt19.55■□□□□ 0.72
SIR4P11978 tP(UGG)O3tP(UGG)O3 72 nt19.36■□□□□ 0.69
SIR4P11978 YBR190WYBR190W 312 nt19.31■□□□□ 0.68
SIR4P11978 RVS167YDR388W 1449 nt19.16■□□□□ 0.66
SIR4P11978 RRN5YLR141W 1092 nt19.09■□□□□ 0.65
SIR4P11978 RTC3YHR087W 336 nt19.03■□□□□ 0.64
SIR4P11978 RSB1YOR049C 1065 nt18.94■□□□□ 0.62
SIR4P11978 YER088W-BYER088W-B 147 nt18.73■□□□□ 0.59
SIR4P11978 YDJ1YNL064C 1230 nt18.65■□□□□ 0.58
SIR4P11978 PST2YDR032C 597 nt18.6■□□□□ 0.57
SIR4P11978 SHR5YOL110W 714 nt18.59■□□□□ 0.57
SIR4P11978 GAR1YHR089C 618 nt18.3■□□□□ 0.52
SIR4P11978 YKL097CYKL097C 411 nt18.24■□□□□ 0.51
SIR4P11978 DEP1YAL013W 1218 nt18.03■□□□□ 0.48
SIR4P11978 SHU1YHL006C 453 nt17.85■□□□□ 0.45
SIR4P11978 URN1YPR152C 1398 nt17.82■□□□□ 0.44
SIR4P11978 YNL208WYNL208W 600 nt17.66■□□□□ 0.42
SIR4P11978 RPN10YHR200W 807 nt17.64■□□□□ 0.41
SIR4P11978 TIR1YER011W 765 nt17.61■□□□□ 0.41
SIR4P11978 PUT4YOR348C 1884 nt17.59■□□□□ 0.41
SIR4P11978 YAL037C-BYAL037C-B 975 nt17.48■□□□□ 0.39
SIR4P11978 OPI9YLR338W 858 nt17.43■□□□□ 0.38
SIR4P11978 SAH1YER043C 1350 nt17.43■□□□□ 0.38
SIR4P11978 YOR139CYOR139C 393 nt17.4■□□□□ 0.38
SIR4P11978 SSA1YAL005C 1929 nt17.3■□□□□ 0.36
SIR4P11978 ARE1YCR048W 1833 nt17.3■□□□□ 0.36
SIR4P11978 YHR049C-AYHR049C-A 297 nt17.21■□□□□ 0.35
SIR4P11978 NPL3YDR432W 1245 nt17.19■□□□□ 0.34
SIR4P11978 SRB2YHR041C 633 nt17.18■□□□□ 0.34
SIR4P11978 POA1YBR022W 534 nt17.11■□□□□ 0.33
SIR4P11978 MNP1YGL068W 585 nt17.07■□□□□ 0.32
SIR4P11978 YJR018WYJR018W 363 nt16.99■□□□□ 0.31
SIR4P11978 WWM1YFL010C 636 nt16.96■□□□□ 0.31
SIR4P11978 YGR021WYGR021W 873 nt16.95■□□□□ 0.3
SIR4P11978 PUN1YLR414C 792 nt16.94■□□□□ 0.3
SIR4P11978 HOM6YJR139C 1080 nt16.92■□□□□ 0.3
SIR4P11978 YJR120WYJR120W 351 nt16.88■□□□□ 0.29
SIR4P11978 YOL037CYOL037C 354 nt16.85■□□□□ 0.29
SIR4P11978 BUD23YCR047C 828 nt16.82■□□□□ 0.28
SIR4P11978 PTC2YER089C 1395 nt16.79■□□□□ 0.28
SIR4P11978 RPP2BYDR382W 333 nt16.78■□□□□ 0.28
SIR4P11978 BSC6YOL137W 1494 nt16.78■□□□□ 0.28
SIR4P11978 RKM5YLR137W 1104 nt16.7■□□□□ 0.26
SIR4P11978 YFL021C-AYFL021C-A 855 nt16.62■□□□□ 0.25
SIR4P11978 tM(CAU)CtM(CAU)C 72 nt16.62■□□□□ 0.25
SIR4P11978 IMT4tM(CAU)E 72 nt16.62■□□□□ 0.25
SIR4P11978 IMT3tM(CAU)J3 72 nt16.62■□□□□ 0.25
SIR4P11978 IMT1tM(CAU)O1 72 nt16.62■□□□□ 0.25
SIR4P11978 IMT2tM(CAU)P 72 nt16.62■□□□□ 0.25
SIR4P11978 NAB2YGL122C 1578 nt16.51■□□□□ 0.23
SIR4P11978 BDH2YAL061W 1254 nt16.51■□□□□ 0.23
SIR4P11978 SSA3YBL075C 1950 nt16.46■□□□□ 0.22
SIR4P11978 FPR4YLR449W 1179 nt16.42■□□□□ 0.22
SIR4P11978 PUS2YGL063W 1113 nt16.41■□□□□ 0.22
SIR4P11978 FIS1YIL065C 468 nt16.4■□□□□ 0.22
SIR4P11978 YLR281CYLR281C 468 nt16.34■□□□□ 0.21
SIR4P11978 DAL1YIR027C 1383 nt16.32■□□□□ 0.2
SIR4P11978 YBL100CYBL100C 315 nt16.3■□□□□ 0.2
SIR4P11978 LSM3YLR438C-A 270 nt16.27■□□□□ 0.2
SIR4P11978 WHI5YOR083W 888 nt16.27■□□□□ 0.2
SIR4P11978 MOT3YMR070W 1473 nt16.25■□□□□ 0.19
SIR4P11978 PHO4YFR034C 939 nt16.25■□□□□ 0.19
SIR4P11978 INM2YDR287W 879 nt16.23■□□□□ 0.19
SIR4P11978 FMP45YDL222C 930 nt16.08■□□□□ 0.16
SIR4P11978 TRM9YML014W 840 nt16.08■□□□□ 0.16
SIR4P11978 FUN26YAL022C 1554 nt16.07■□□□□ 0.16
SIR4P11978 YLR236CYLR236C 324 nt16.03■□□□□ 0.16
SIR4P11978 DSK2YMR276W 1122 nt16■□□□□ 0.15
SIR4P11978 YPR011CYPR011C 981 nt15.97■□□□□ 0.15
SIR4P11978 YLR154C-GYLR154C-G 150 nt15.93■□□□□ 0.14
SIR4P11978 CCT6YDR188W 1641 nt15.9■□□□□ 0.14
SIR4P11978 YPS1YLR120C 1710 nt15.85■□□□□ 0.13
SIR4P11978 YCH1YGR203W 447 nt15.83■□□□□ 0.12
Retrieved 100 of 7,029 protein–RNA pairs in 943.6 ms