Protein–RNA interactions for Protein: P40889

YJL225C, Y' element ATP-dependent helicase YJL225C, yeastyeast

Predictions only

Length 1,758 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
YJL225CP40889 YML009W-BYML009W-B 477 nt27.25■■□□□ 1.95
YJL225CP40889 NSR1YGR159C 1245 nt26.04■■□□□ 1.76
YJL225CP40889 NOP1YDL014W 984 nt25.9■■□□□ 1.74
YJL225CP40889 YKL036CYKL036C 393 nt24.8■■□□□ 1.56
YJL225CP40889 MDJ1YFL016C 1536 nt23.36■■□□□ 1.33
YJL225CP40889 SRX1YKL086W 384 nt23.21■■□□□ 1.31
YJL225CP40889 Q0297Q0297 156 nt23.2■■□□□ 1.3
YJL225CP40889 YJL027CYJL027C 417 nt23.17■■□□□ 1.3
YJL225CP40889 SCS3YGL126W 1143 nt23.11■■□□□ 1.29
YJL225CP40889 YCR051WYCR051W 669 nt22.01■■□□□ 1.11
YJL225CP40889 PKP1YIL042C 1185 nt21.33■■□□□ 1.01
YJL225CP40889 YOL085CYOL085C 342 nt21.31■■□□□ 1
YJL225CP40889 TRN1tP(UGG)A 72 nt20.82■□□□□ 0.92
YJL225CP40889 SUF9tP(UGG)F 72 nt20.82■□□□□ 0.92
YJL225CP40889 SUF8tP(UGG)H 72 nt20.82■□□□□ 0.92
YJL225CP40889 tP(UGG)LtP(UGG)L 72 nt20.82■□□□□ 0.92
YJL225CP40889 SUF7tP(UGG)M 72 nt20.82■□□□□ 0.92
YJL225CP40889 tP(UGG)N1tP(UGG)N1 72 nt20.82■□□□□ 0.92
YJL225CP40889 tP(UGG)N2tP(UGG)N2 72 nt20.82■□□□□ 0.92
YJL225CP40889 tP(UGG)O1tP(UGG)O1 72 nt20.82■□□□□ 0.92
YJL225CP40889 SUF11tP(UGG)O2 72 nt20.82■□□□□ 0.92
YJL225CP40889 DBP2YNL112W 1641 nt20.81■□□□□ 0.92
YJL225CP40889 RPP1BYDL130W 321 nt20.74■□□□□ 0.91
YJL225CP40889 SCJ1YMR214W 1134 nt20.54■□□□□ 0.88
YJL225CP40889 ATS1YAL020C 1002 nt20.44■□□□□ 0.86
YJL225CP40889 CCC1YLR220W 969 nt20.43■□□□□ 0.86
YJL225CP40889 PET122YER153C 765 nt20.1■□□□□ 0.81
YJL225CP40889 tP(UGG)O3tP(UGG)O3 72 nt19.67■□□□□ 0.74
YJL225CP40889 SCR1SCR1 522 nt19.65■□□□□ 0.74
YJL225CP40889 RRN5YLR141W 1092 nt19.33■□□□□ 0.68
YJL225CP40889 YBR190WYBR190W 312 nt19.29■□□□□ 0.68
YJL225CP40889 RVS167YDR388W 1449 nt19.24■□□□□ 0.67
YJL225CP40889 RSB1YOR049C 1065 nt19.24■□□□□ 0.67
YJL225CP40889 RTC3YHR087W 336 nt19.01■□□□□ 0.63
YJL225CP40889 YER088W-BYER088W-B 147 nt18.98■□□□□ 0.63
YJL225CP40889 PST2YDR032C 597 nt18.86■□□□□ 0.61
YJL225CP40889 SHR5YOL110W 714 nt18.83■□□□□ 0.6
YJL225CP40889 YDJ1YNL064C 1230 nt18.79■□□□□ 0.6
YJL225CP40889 GAR1YHR089C 618 nt18.51■□□□□ 0.55
YJL225CP40889 YKL097CYKL097C 411 nt18.5■□□□□ 0.55
YJL225CP40889 DEP1YAL013W 1218 nt18.45■□□□□ 0.54
YJL225CP40889 SHU1YHL006C 453 nt18.25■□□□□ 0.51
YJL225CP40889 URN1YPR152C 1398 nt18.2■□□□□ 0.5
YJL225CP40889 YAL037C-BYAL037C-B 975 nt18.03■□□□□ 0.48
YJL225CP40889 YOR139CYOR139C 393 nt17.93■□□□□ 0.46
YJL225CP40889 SRB2YHR041C 633 nt17.87■□□□□ 0.45
YJL225CP40889 TIR1YER011W 765 nt17.82■□□□□ 0.44
YJL225CP40889 YNL208WYNL208W 600 nt17.72■□□□□ 0.43
YJL225CP40889 SSA1YAL005C 1929 nt17.67■□□□□ 0.42
YJL225CP40889 SAH1YER043C 1350 nt17.62■□□□□ 0.41
YJL225CP40889 MNP1YGL068W 585 nt17.62■□□□□ 0.41
YJL225CP40889 OPI9YLR338W 858 nt17.62■□□□□ 0.41
YJL225CP40889 RPN10YHR200W 807 nt17.61■□□□□ 0.41
YJL225CP40889 YJR120WYJR120W 351 nt17.55■□□□□ 0.4
YJL225CP40889 WWM1YFL010C 636 nt17.4■□□□□ 0.38
YJL225CP40889 NPL3YDR432W 1245 nt17.39■□□□□ 0.37
YJL225CP40889 ARE1YCR048W 1833 nt17.37■□□□□ 0.37
YJL225CP40889 PUT4YOR348C 1884 nt17.36■□□□□ 0.37
YJL225CP40889 YHR049C-AYHR049C-A 297 nt17.3■□□□□ 0.36
YJL225CP40889 HOM6YJR139C 1080 nt17.28■□□□□ 0.36
YJL225CP40889 YJR018WYJR018W 363 nt17.24■□□□□ 0.35
YJL225CP40889 SSA3YBL075C 1950 nt17.11■□□□□ 0.33
YJL225CP40889 YOL037CYOL037C 354 nt17.09■□□□□ 0.33
YJL225CP40889 YGR021WYGR021W 873 nt17.08■□□□□ 0.33
YJL225CP40889 PUN1YLR414C 792 nt17.01■□□□□ 0.31
YJL225CP40889 RKM5YLR137W 1104 nt16.9■□□□□ 0.3
YJL225CP40889 POA1YBR022W 534 nt16.87■□□□□ 0.29
YJL225CP40889 YFL021C-AYFL021C-A 855 nt16.84■□□□□ 0.29
YJL225CP40889 tM(CAU)CtM(CAU)C 72 nt16.81■□□□□ 0.28
YJL225CP40889 IMT4tM(CAU)E 72 nt16.81■□□□□ 0.28
YJL225CP40889 IMT3tM(CAU)J3 72 nt16.81■□□□□ 0.28
YJL225CP40889 IMT1tM(CAU)O1 72 nt16.81■□□□□ 0.28
YJL225CP40889 IMT2tM(CAU)P 72 nt16.81■□□□□ 0.28
YJL225CP40889 RPP2BYDR382W 333 nt16.79■□□□□ 0.28
YJL225CP40889 PTC2YER089C 1395 nt16.78■□□□□ 0.28
YJL225CP40889 BUD23YCR047C 828 nt16.78■□□□□ 0.28
YJL225CP40889 BDH2YAL061W 1254 nt16.78■□□□□ 0.28
YJL225CP40889 FIS1YIL065C 468 nt16.74■□□□□ 0.27
YJL225CP40889 PUS2YGL063W 1113 nt16.64■□□□□ 0.25
YJL225CP40889 YLR281CYLR281C 468 nt16.59■□□□□ 0.25
YJL225CP40889 YLR236CYLR236C 324 nt16.57■□□□□ 0.24
YJL225CP40889 YBL100CYBL100C 315 nt16.55■□□□□ 0.24
YJL225CP40889 WHI5YOR083W 888 nt16.54■□□□□ 0.24
YJL225CP40889 BSC6YOL137W 1494 nt16.53■□□□□ 0.24
YJL225CP40889 MOT3YMR070W 1473 nt16.52■□□□□ 0.24
YJL225CP40889 PHO4YFR034C 939 nt16.51■□□□□ 0.23
YJL225CP40889 NAB2YGL122C 1578 nt16.5■□□□□ 0.23
YJL225CP40889 YPR011CYPR011C 981 nt16.48■□□□□ 0.23
YJL225CP40889 FPR4YLR449W 1179 nt16.36■□□□□ 0.21
YJL225CP40889 FMP45YDL222C 930 nt16.35■□□□□ 0.21
YJL225CP40889 DAL1YIR027C 1383 nt16.31■□□□□ 0.2
YJL225CP40889 YLR154C-GYLR154C-G 150 nt16.27■□□□□ 0.2
YJL225CP40889 LSM3YLR438C-A 270 nt16.26■□□□□ 0.19
YJL225CP40889 DSK2YMR276W 1122 nt16.23■□□□□ 0.19
YJL225CP40889 LPX1YOR084W 1164 nt16.2■□□□□ 0.18
YJL225CP40889 INM2YDR287W 879 nt16.19■□□□□ 0.18
YJL225CP40889 FUN26YAL022C 1554 nt16.18■□□□□ 0.18
YJL225CP40889 TRM9YML014W 840 nt16.15■□□□□ 0.18
YJL225CP40889 CCT6YDR188W 1641 nt16.1■□□□□ 0.17
YJL225CP40889 SPP1YPL138C 1062 nt16.03■□□□□ 0.16
Retrieved 100 of 7,029 protein–RNA pairs in 7.3 ms