RNA–Protein interactions for RNA: YKL068W

NUP100, Transcript of FG-nucleoporin component of central core of the nuclear pore complex, yeastyeast

Gene NUP100, Length 2,880 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NUP100YKL068W ARP2P32381 391 aaKnown RBP2.4□□□□□ -2.02
NUP100YKL068W POL12P38121 705 aaPredicted RBP2.4□□□□□ -2.02
NUP100YKL068W POA1P38218 177 aa2.4□□□□□ -2.02
NUP100YKL068W GIC1P38785 314 aa2.4□□□□□ -2.02
NUP100YKL068W BRE2P43132 505 aa2.4□□□□□ -2.02
NUP100YKL068W RAD17P48581 401 aa2.4□□□□□ -2.02
NUP100YKL068W LCL3P53153 274 aa2.4□□□□□ -2.02
NUP100YKL068W YBP2P53169 641 aa2.4□□□□□ -2.02
NUP100YKL068W DAK1P54838 584 aaKnown RBP2.4□□□□□ -2.02
NUP100YKL068W PRO2P54885 456 aaKnown RBP2.4□□□□□ -2.02
NUP100YKL068W UBP2Q01476 1272 aa2.4□□□□□ -2.02
NUP100YKL068W TOF2Q02208 771 aa2.4□□□□□ -2.02
NUP100YKL068W TY1A-MR1Q04215 440 aa2.4□□□□□ -2.02
NUP100YKL068W GIS4Q04233 774 aa2.4□□□□□ -2.02
NUP100YKL068W ECM22Q05958 814 aaPredicted RBP2.4□□□□□ -2.02
NUP100YKL068W SYT1Q06836 1226 aa2.4□□□□□ -2.02
NUP100YKL068W YPL260WQ08977 551 aa2.4□□□□□ -2.02
NUP100YKL068W YPL277CQ08989 487 aa2.4□□□□□ -2.02
NUP100YKL068W YRM1Q12340 786 aa2.4□□□□□ -2.02
NUP100YKL068W ATG11Q12527 1178 aa2.4□□□□□ -2.02
NUP100YKL068W PCK1P10963 549 aa2.4□□□□□ -2.03
NUP100YKL068W KAR3P17119 729 aa2.4□□□□□ -2.03
NUP100YKL068W OCA4P25366 362 aa2.4□□□□□ -2.03
NUP100YKL068W RPD3P32561 433 aa2.4□□□□□ -2.03
NUP100YKL068W YBL029WP38201 376 aa2.4□□□□□ -2.03
NUP100YKL068W SMF1P38925 575 aa2.4□□□□□ -2.03
NUP100YKL068W MRX1P40050 688 aa2.4□□□□□ -2.03
NUP100YKL068W LAM5P43560 674 aa2.4□□□□□ -2.03
NUP100YKL068W MET12P46151 657 aa2.4□□□□□ -2.03
NUP100YKL068W TCB2P48231 1178 aa2.4□□□□□ -2.03
NUP100YKL068W CUZ1P53899 274 aa2.4□□□□□ -2.03
NUP100YKL068W ORC4P54791 529 aa2.4□□□□□ -2.03
NUP100YKL068W REG1Q00816 1014 aa2.4□□□□□ -2.03
NUP100YKL068W ABZ2Q03266 374 aa2.4□□□□□ -2.03
NUP100YKL068W YMR210WQ03649 449 aa2.4□□□□□ -2.03
NUP100YKL068W IRC10Q08118 586 aa2.4□□□□□ -2.03
NUP100YKL068W RCN2Q12044 265 aa2.4□□□□□ -2.03
NUP100YKL068W RPN5Q12250 445 aaKnown RBP2.4□□□□□ -2.03
NUP100YKL068W MDM20Q12387 796 aaKnown RBP2.4□□□□□ -2.03
NUP100YKL068W AFI1Q99222 893 aa2.4□□□□□ -2.03
NUP100YKL068W SEC16P48415 2195 aaKnown RBP2.4□□□□□ -2.03
NUP100YKL068W MRPL25P23369 157 aa2.39□□□□□ -2.03
NUP100YKL068W CLB3P24870 427 aa2.39□□□□□ -2.03
NUP100YKL068W SPB1P25582 841 aaPredicted RBP2.39□□□□□ -2.03
NUP100YKL068W URA7P28274 579 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W SMY1P32364 656 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W MF(ALPHA)2P32435 120 aa2.39□□□□□ -2.03
NUP100YKL068W YHR033WP38690 423 aa2.39□□□□□ -2.03
NUP100YKL068W YHR054CP38780 354 aa2.39□□□□□ -2.03
NUP100YKL068W VPS45P38932 577 aa2.39□□□□□ -2.03
NUP100YKL068W BEM4P39011 633 aa2.39□□□□□ -2.03
NUP100YKL068W GCV1P48015 400 aa2.39□□□□□ -2.03
NUP100YKL068W YKE2P52553 114 aa2.39□□□□□ -2.03
NUP100YKL068W NUP84P52891 726 aa2.39□□□□□ -2.03
NUP100YKL068W LSB1P53281 241 aa2.39□□□□□ -2.03
NUP100YKL068W GPD1Q00055 391 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W SRT1Q03175 343 aa2.39□□□□□ -2.03
NUP100YKL068W ARX1Q03862 593 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W YLR346CQ06139 101 aa2.39□□□□□ -2.03
NUP100YKL068W PUF3Q07807 879 aaKnown RBP RIP-Chip data2.39□□□□□ -2.03not detected
NUP100YKL068W SLM3Q12093 417 aa2.39□□□□□ -2.03
NUP100YKL068W SKS1Q12505 502 aa2.39□□□□□ -2.03
NUP100YKL068W ISN1Q99312 450 aa2.39□□□□□ -2.03
NUP100YKL068W RPP1AP05318 106 aaPredicted RBP2.39□□□□□ -2.03
NUP100YKL068W YML002WP0CF17 737 aa2.39□□□□□ -2.03
NUP100YKL068W DBP3P20447 523 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W PHO84P25297 587 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W TRK2P28584 889 aa2.39□□□□□ -2.03
NUP100YKL068W SWH1P35845 1188 aa2.39□□□□□ -2.03
NUP100YKL068W HEL1P36113 551 aa2.39□□□□□ -2.03
NUP100YKL068W YKR078WP36158 585 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W KTR3P38130 404 aaPredicted RBP2.39□□□□□ -2.03
NUP100YKL068W YER034WP40022 185 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W MKT1P40850 830 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W LEM3P42838 414 aa2.39□□□□□ -2.03
NUP100YKL068W SHE4P51534 789 aa2.39□□□□□ -2.03
NUP100YKL068W TEL2P53038 688 aa2.39□□□□□ -2.03
NUP100YKL068W MTC3P53077 123 aa2.39□□□□□ -2.03
NUP100YKL068W YGR045CP53229 120 aa2.39□□□□□ -2.03
NUP100YKL068W EFR3Q03653 782 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W ROY1Q04847 553 aa2.39□□□□□ -2.03
NUP100YKL068W RSA3Q05942 220 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W DBP9Q06218 594 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W YSH1Q06224 779 aaPredicted RBP2.39□□□□□ -2.03
NUP100YKL068W NOP6Q07623 225 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W RIM20Q12033 661 aa2.39□□□□□ -2.03
NUP100YKL068W RTC5Q12108 567 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W CET1O13297 549 aaPredicted RBP2.39□□□□□ -2.03
NUP100YKL068W URA3P03962 267 aa2.39□□□□□ -2.03
NUP100YKL068W GAL7P08431 366 aa2.39□□□□□ -2.03
NUP100YKL068W DMC1P25453 334 aa2.39□□□□□ -2.03
NUP100YKL068W YCR051WP25631 222 aa2.39□□□□□ -2.03
NUP100YKL068W RME1P32338 300 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W FRD1P32614 470 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W YUH1P35127 236 aa2.39□□□□□ -2.03
NUP100YKL068W AKL1P38080 1108 aaKnown RBP2.39□□□□□ -2.03
NUP100YKL068W UBP13P38187 747 aa2.39□□□□□ -2.03
NUP100YKL068W REG2P38232 338 aa2.39□□□□□ -2.03
NUP100YKL068W MET18P40469 1032 aa2.39□□□□□ -2.03
NUP100YKL068W CAB2P40506 365 aa2.39□□□□□ -2.03
Retrieved 100 of 5,963 RNA–protein pairs in 23.3 ms