Protein–RNA interactions for Protein: P05318

RPP1A, 60S acidic ribosomal protein P1-alpha, yeastyeast

Predicted RBP Predictions only

Length 106 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
RPP1AP05318 NSR1YGR159C 1245 nt16.67■□□□□ 0.26
RPP1AP05318 YML009W-BYML009W-B 477 nt16.03■□□□□ 0.16
RPP1AP05318 MDJ1YFL016C 1536 nt15.4■□□□□ 0.06
RPP1AP05318 NOP1YDL014W 984 nt15.37■□□□□ 0.05
RPP1AP05318 YJL027CYJL027C 417 nt14.2□□□□□ -0.14
RPP1AP05318 SSA3YBL075C 1950 nt13.92□□□□□ -0.18
RPP1AP05318 YKL036CYKL036C 393 nt13.46□□□□□ -0.25
RPP1AP05318 SRX1YKL086W 384 nt13.41□□□□□ -0.26
RPP1AP05318 YBR190WYBR190W 312 nt13.41□□□□□ -0.26
RPP1AP05318 Q0182Q0182 405 nt13.37□□□□□ -0.27
RPP1AP05318 DBP2YNL112W 1641 nt13.35□□□□□ -0.27
RPP1AP05318 Q0297Q0297 156 nt13.2□□□□□ -0.3
RPP1AP05318 MOT3YMR070W 1473 nt13.04□□□□□ -0.32
RPP1AP05318 RTC3YHR087W 336 nt13.01□□□□□ -0.33
RPP1AP05318 PUT4YOR348C 1884 nt12.72□□□□□ -0.37
RPP1AP05318 YGR139WYGR139W 339 nt12.65□□□□□ -0.38
RPP1AP05318 YCR051WYCR051W 669 nt12.61□□□□□ -0.39
RPP1AP05318 TRN1tP(UGG)A 72 nt12.55□□□□□ -0.4
RPP1AP05318 SUF9tP(UGG)F 72 nt12.55□□□□□ -0.4
RPP1AP05318 SUF8tP(UGG)H 72 nt12.55□□□□□ -0.4
RPP1AP05318 tP(UGG)LtP(UGG)L 72 nt12.55□□□□□ -0.4
RPP1AP05318 SUF7tP(UGG)M 72 nt12.55□□□□□ -0.4
RPP1AP05318 tP(UGG)N1tP(UGG)N1 72 nt12.55□□□□□ -0.4
RPP1AP05318 tP(UGG)N2tP(UGG)N2 72 nt12.55□□□□□ -0.4
RPP1AP05318 tP(UGG)O1tP(UGG)O1 72 nt12.55□□□□□ -0.4
RPP1AP05318 SUF11tP(UGG)O2 72 nt12.55□□□□□ -0.4
RPP1AP05318 RVS167YDR388W 1449 nt12.44□□□□□ -0.42
RPP1AP05318 CCC1YLR220W 969 nt12.35□□□□□ -0.43
RPP1AP05318 ARE1YCR048W 1833 nt12.24□□□□□ -0.45
RPP1AP05318 POA1YBR022W 534 nt12.23□□□□□ -0.45
RPP1AP05318 NME1NME1 340 nt12.19□□□□□ -0.46
RPP1AP05318 SCJ1YMR214W 1134 nt12.14□□□□□ -0.47
RPP1AP05318 SPT5YML010W 3192 nt12.14□□□□□ -0.47
RPP1AP05318 BSC6YOL137W 1494 nt12.12□□□□□ -0.47
RPP1AP05318 YHR049C-AYHR049C-A 297 nt12.08□□□□□ -0.48
RPP1AP05318 SSA4YER103W 1929 nt12.07□□□□□ -0.48
RPP1AP05318 SAH1YER043C 1350 nt12□□□□□ -0.49
RPP1AP05318 OPI9YLR338W 858 nt11.94□□□□□ -0.5
RPP1AP05318 URN1YPR152C 1398 nt11.92□□□□□ -0.5
RPP1AP05318 RPP1BYDL130W 321 nt11.83□□□□□ -0.52
RPP1AP05318 SCS3YGL126W 1143 nt11.82□□□□□ -0.52
RPP1AP05318 SHR5YOL110W 714 nt11.82□□□□□ -0.52
RPP1AP05318 PAC11YDR488C 1602 nt11.79□□□□□ -0.52
RPP1AP05318 BUD23YCR047C 828 nt11.73□□□□□ -0.53
RPP1AP05318 NVJ2YPR091C 2313 nt11.7□□□□□ -0.54
RPP1AP05318 BDF1YLR399C 2061 nt11.7□□□□□ -0.54
RPP1AP05318 YOL085CYOL085C 342 nt11.66□□□□□ -0.54
RPP1AP05318 DEP1YAL013W 1218 nt11.65□□□□□ -0.54
RPP1AP05318 RPN10YHR200W 807 nt11.63□□□□□ -0.55
RPP1AP05318 tP(UGG)O3tP(UGG)O3 72 nt11.62□□□□□ -0.55
RPP1AP05318 PUN1YLR414C 792 nt11.6□□□□□ -0.55
RPP1AP05318 TAT1YBR069C 1860 nt11.53□□□□□ -0.56
RPP1AP05318 NAB2YGL122C 1578 nt11.53□□□□□ -0.56
RPP1AP05318 PTC2YER089C 1395 nt11.53□□□□□ -0.56
RPP1AP05318 PKP1YIL042C 1185 nt11.5□□□□□ -0.57
RPP1AP05318 MEP2YNL142W 1500 nt11.49□□□□□ -0.57
RPP1AP05318 YNL208WYNL208W 600 nt11.47□□□□□ -0.57
RPP1AP05318 CSM2YIL132C 642 nt11.44□□□□□ -0.58
RPP1AP05318 FPS1YLL043W 2010 nt11.4□□□□□ -0.59
RPP1AP05318 PET122YER153C 765 nt11.35□□□□□ -0.59
RPP1AP05318 YJR018WYJR018W 363 nt11.35□□□□□ -0.59
RPP1AP05318 YDJ1YNL064C 1230 nt11.3□□□□□ -0.6
RPP1AP05318 FIS1YIL065C 468 nt11.25□□□□□ -0.61
RPP1AP05318 DCW1YKL046C 1350 nt11.23□□□□□ -0.61
RPP1AP05318 DAL1YIR027C 1383 nt11.22□□□□□ -0.61
RPP1AP05318 YJL225CYJL225C 5277 nt11.18□□□□□ -0.62
RPP1AP05318 YPS1YLR120C 1710 nt11.16□□□□□ -0.62
RPP1AP05318 YBR220CYBR220C 1683 nt11.15□□□□□ -0.62
RPP1AP05318 YMR090WYMR090W 684 nt11.15□□□□□ -0.62
RPP1AP05318 FPR4YLR449W 1179 nt11.12□□□□□ -0.63
RPP1AP05318 EMI2YDR516C 1503 nt11.1□□□□□ -0.63
RPP1AP05318 PAU21YOR394W 495 nt11.1□□□□□ -0.63
RPP1AP05318 PAU22YPL282C 495 nt11.1□□□□□ -0.63
RPP1AP05318 PHO4YFR034C 939 nt11.09□□□□□ -0.63
RPP1AP05318 INM2YDR287W 879 nt11.08□□□□□ -0.64
RPP1AP05318 GAR1YHR089C 618 nt11.08□□□□□ -0.64
RPP1AP05318 YHR165W-AYHR165W-A 312 nt11.07□□□□□ -0.64
RPP1AP05318 SCR1SCR1 522 nt11.07□□□□□ -0.64
RPP1AP05318 ARO7YPR060C 771 nt11.07□□□□□ -0.64
RPP1AP05318 YDR095CYDR095C 411 nt10.98□□□□□ -0.65
RPP1AP05318 SDH1YKL148C 1923 nt10.97□□□□□ -0.65
RPP1AP05318 YJR120WYJR120W 351 nt10.97□□□□□ -0.65
RPP1AP05318 SSA1YAL005C 1929 nt10.97□□□□□ -0.65
RPP1AP05318 YDL221WYDL221W 552 nt10.96□□□□□ -0.65
RPP1AP05318 RRN5YLR141W 1092 nt10.95□□□□□ -0.66
RPP1AP05318 PCH2YBR186W 1695 nt10.95□□□□□ -0.66
RPP1AP05318 RPP2BYDR382W 333 nt10.94□□□□□ -0.66
RPP1AP05318 SEC11YIR022W 504 nt10.93□□□□□ -0.66
RPP1AP05318 GUT2YIL155C 1950 nt10.91□□□□□ -0.66
RPP1AP05318 PAM17YKR065C 594 nt10.84□□□□□ -0.67
RPP1AP05318 RDN37-1RDN37-1 5354 nt10.83□□□□□ -0.68
RPP1AP05318 RDN37-2RDN37-2 5354 nt10.83□□□□□ -0.68
RPP1AP05318 CAC2YML102W 1407 nt10.82□□□□□ -0.68
RPP1AP05318 UME6YDR207C 2511 nt10.81□□□□□ -0.68
RPP1AP05318 SCC4YER147C 1875 nt10.79□□□□□ -0.68
RPP1AP05318 YBL100CYBL100C 315 nt10.79□□□□□ -0.68
RPP1AP05318 PTP1YDL230W 1008 nt10.78□□□□□ -0.68
RPP1AP05318 TIR1YER011W 765 nt10.77□□□□□ -0.69
RPP1AP05318 RPP2AYOL039W 321 nt10.77□□□□□ -0.69
RPP1AP05318 YER088W-BYER088W-B 147 nt10.73□□□□□ -0.69
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms