Protein–RNA interactions for Protein: Q99222

AFI1, ARF3-interacting protein 1, yeastyeast

Predictions only

Length 893 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
AFI1Q99222 YML009W-BYML009W-B 477 nt20.94■□□□□ 0.94
AFI1Q99222 NSR1YGR159C 1245 nt20.79■□□□□ 0.92
AFI1Q99222 NOP1YDL014W 984 nt20.36■□□□□ 0.85
AFI1Q99222 YKL036CYKL036C 393 nt18.83■□□□□ 0.6
AFI1Q99222 MDJ1YFL016C 1536 nt18.42■□□□□ 0.54
AFI1Q99222 Q0297Q0297 156 nt17.85■□□□□ 0.45
AFI1Q99222 SRX1YKL086W 384 nt17.8■□□□□ 0.44
AFI1Q99222 YJL027CYJL027C 417 nt17.59■□□□□ 0.41
AFI1Q99222 SCS3YGL126W 1143 nt17.16■□□□□ 0.34
AFI1Q99222 YCR051WYCR051W 669 nt16.88■□□□□ 0.29
AFI1Q99222 DBP2YNL112W 1641 nt16.34■□□□□ 0.21
AFI1Q99222 YOL085CYOL085C 342 nt16.31■□□□□ 0.2
AFI1Q99222 TRN1tP(UGG)A 72 nt16.09■□□□□ 0.17
AFI1Q99222 SUF9tP(UGG)F 72 nt16.09■□□□□ 0.17
AFI1Q99222 SUF8tP(UGG)H 72 nt16.09■□□□□ 0.17
AFI1Q99222 tP(UGG)LtP(UGG)L 72 nt16.09■□□□□ 0.17
AFI1Q99222 SUF7tP(UGG)M 72 nt16.09■□□□□ 0.17
AFI1Q99222 tP(UGG)N1tP(UGG)N1 72 nt16.09■□□□□ 0.17
AFI1Q99222 tP(UGG)N2tP(UGG)N2 72 nt16.09■□□□□ 0.17
AFI1Q99222 tP(UGG)O1tP(UGG)O1 72 nt16.09■□□□□ 0.17
AFI1Q99222 SUF11tP(UGG)O2 72 nt16.09■□□□□ 0.17
AFI1Q99222 PKP1YIL042C 1185 nt16.06■□□□□ 0.16
AFI1Q99222 RPP1BYDL130W 321 nt16.02■□□□□ 0.16
AFI1Q99222 CCC1YLR220W 969 nt15.9■□□□□ 0.14
AFI1Q99222 YBR190WYBR190W 312 nt15.7■□□□□ 0.1
AFI1Q99222 ATS1YAL020C 1002 nt15.36■□□□□ 0.05
AFI1Q99222 RVS167YDR388W 1449 nt15.34■□□□□ 0.05
AFI1Q99222 RTC3YHR087W 336 nt15.33■□□□□ 0.04
AFI1Q99222 PET122YER153C 765 nt15.3■□□□□ 0.04
AFI1Q99222 SCJ1YMR214W 1134 nt15.29■□□□□ 0.04
AFI1Q99222 tP(UGG)O3tP(UGG)O3 72 nt15.22■□□□□ 0.03
AFI1Q99222 SCR1SCR1 522 nt15.13■□□□□ 0.01
AFI1Q99222 RRN5YLR141W 1092 nt14.85□□□□□ -0.03
AFI1Q99222 SHR5YOL110W 714 nt14.82□□□□□ -0.04
AFI1Q99222 YDJ1YNL064C 1230 nt14.72□□□□□ -0.05
AFI1Q99222 YER088W-BYER088W-B 147 nt14.56□□□□□ -0.08
AFI1Q99222 RSB1YOR049C 1065 nt14.56□□□□□ -0.08
AFI1Q99222 GAR1YHR089C 618 nt14.39□□□□□ -0.11
AFI1Q99222 URN1YPR152C 1398 nt14.38□□□□□ -0.11
AFI1Q99222 DEP1YAL013W 1218 nt14.38□□□□□ -0.11
AFI1Q99222 PUT4YOR348C 1884 nt14.24□□□□□ -0.13
AFI1Q99222 PST2YDR032C 597 nt14.23□□□□□ -0.13
AFI1Q99222 RPN10YHR200W 807 nt14.17□□□□□ -0.14
AFI1Q99222 OPI9YLR338W 858 nt14.17□□□□□ -0.14
AFI1Q99222 YNL208WYNL208W 600 nt14.17□□□□□ -0.14
AFI1Q99222 SAH1YER043C 1350 nt14.07□□□□□ -0.16
AFI1Q99222 ARE1YCR048W 1833 nt14□□□□□ -0.17
AFI1Q99222 TIR1YER011W 765 nt13.91□□□□□ -0.18
AFI1Q99222 YHR049C-AYHR049C-A 297 nt13.8□□□□□ -0.2
AFI1Q99222 POA1YBR022W 534 nt13.78□□□□□ -0.2
AFI1Q99222 PUN1YLR414C 792 nt13.76□□□□□ -0.21
AFI1Q99222 SSA1YAL005C 1929 nt13.74□□□□□ -0.21
AFI1Q99222 YJR018WYJR018W 363 nt13.73□□□□□ -0.21
AFI1Q99222 YKL097CYKL097C 411 nt13.67□□□□□ -0.22
AFI1Q99222 SHU1YHL006C 453 nt13.64□□□□□ -0.23
AFI1Q99222 SSA3YBL075C 1950 nt13.61□□□□□ -0.23
AFI1Q99222 PTC2YER089C 1395 nt13.58□□□□□ -0.23
AFI1Q99222 YJR120WYJR120W 351 nt13.54□□□□□ -0.24
AFI1Q99222 SRB2YHR041C 633 nt13.53□□□□□ -0.24
AFI1Q99222 BSC6YOL137W 1494 nt13.48□□□□□ -0.25
AFI1Q99222 BUD23YCR047C 828 nt13.47□□□□□ -0.25
AFI1Q99222 RPP2BYDR382W 333 nt13.45□□□□□ -0.26
AFI1Q99222 YAL037C-BYAL037C-B 975 nt13.41□□□□□ -0.26
AFI1Q99222 NAB2YGL122C 1578 nt13.41□□□□□ -0.26
AFI1Q99222 WWM1YFL010C 636 nt13.3□□□□□ -0.28
AFI1Q99222 YGR021WYGR021W 873 nt13.24□□□□□ -0.29
AFI1Q99222 DAL1YIR027C 1383 nt13.23□□□□□ -0.29
AFI1Q99222 INM2YDR287W 879 nt13.23□□□□□ -0.29
AFI1Q99222 FIS1YIL065C 468 nt13.23□□□□□ -0.29
AFI1Q99222 HOM6YJR139C 1080 nt13.2□□□□□ -0.3
AFI1Q99222 BDH2YAL061W 1254 nt13.2□□□□□ -0.3
AFI1Q99222 FPR4YLR449W 1179 nt13.18□□□□□ -0.3
AFI1Q99222 MNP1YGL068W 585 nt13.14□□□□□ -0.31
AFI1Q99222 YOR139CYOR139C 393 nt13.12□□□□□ -0.31
AFI1Q99222 PHO4YFR034C 939 nt13.11□□□□□ -0.31
AFI1Q99222 YBL100CYBL100C 315 nt13.11□□□□□ -0.31
AFI1Q99222 YFL021C-AYFL021C-A 855 nt13.08□□□□□ -0.32
AFI1Q99222 LSM3YLR438C-A 270 nt13.03□□□□□ -0.32
AFI1Q99222 NPL3YDR432W 1245 nt13□□□□□ -0.33
AFI1Q99222 RKM5YLR137W 1104 nt13□□□□□ -0.33
AFI1Q99222 FUN26YAL022C 1554 nt12.96□□□□□ -0.33
AFI1Q99222 TRM9YML014W 840 nt12.93□□□□□ -0.34
AFI1Q99222 YOL037CYOL037C 354 nt12.93□□□□□ -0.34
AFI1Q99222 YPS1YLR120C 1710 nt12.85□□□□□ -0.35
AFI1Q99222 SPT5YML010W 3192 nt12.84□□□□□ -0.35
AFI1Q99222 CCT6YDR188W 1641 nt12.82□□□□□ -0.36
AFI1Q99222 YDR095CYDR095C 411 nt12.77□□□□□ -0.37
AFI1Q99222 ALF1YNL148C 765 nt12.75□□□□□ -0.37
AFI1Q99222 SUF2tP(AGG)C 72 nt12.69□□□□□ -0.38
AFI1Q99222 SUF10tP(AGG)N 72 nt12.69□□□□□ -0.38
AFI1Q99222 YHR165W-AYHR165W-A 312 nt12.69□□□□□ -0.38
AFI1Q99222 MEP2YNL142W 1500 nt12.65□□□□□ -0.38
AFI1Q99222 YLR281CYLR281C 468 nt12.63□□□□□ -0.39
AFI1Q99222 tM(CAU)CtM(CAU)C 72 nt12.61□□□□□ -0.39
AFI1Q99222 IMT4tM(CAU)E 72 nt12.61□□□□□ -0.39
AFI1Q99222 IMT3tM(CAU)J3 72 nt12.61□□□□□ -0.39
AFI1Q99222 IMT1tM(CAU)O1 72 nt12.61□□□□□ -0.39
AFI1Q99222 IMT2tM(CAU)P 72 nt12.61□□□□□ -0.39
AFI1Q99222 WHI5YOR083W 888 nt12.59□□□□□ -0.39
AFI1Q99222 SIS1YNL007C 1059 nt12.58□□□□□ -0.4
Retrieved 100 of 7,029 protein–RNA pairs in 24.8 ms