Protein–RNA interactions for Protein: Q01476

UBP2, Ubiquitin carboxyl-terminal hydrolase 2, yeastyeast

Predictions only

Length 1,272 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
UBP2Q01476 NSR1YGR159C 1245 nt19.99■□□□□ 0.79
UBP2Q01476 YML009W-BYML009W-B 477 nt19.63■□□□□ 0.73
UBP2Q01476 NOP1YDL014W 984 nt18.84■□□□□ 0.61
UBP2Q01476 MDJ1YFL016C 1536 nt18.25■□□□□ 0.51
UBP2Q01476 YKL036CYKL036C 393 nt16.92■□□□□ 0.3
UBP2Q01476 YJL027CYJL027C 417 nt16.78■□□□□ 0.28
UBP2Q01476 SRX1YKL086W 384 nt16.5■□□□□ 0.23
UBP2Q01476 Q0297Q0297 156 nt16.36■□□□□ 0.21
UBP2Q01476 DBP2YNL112W 1641 nt15.97■□□□□ 0.15
UBP2Q01476 YBR190WYBR190W 312 nt15.69■□□□□ 0.1
UBP2Q01476 YCR051WYCR051W 669 nt15.61■□□□□ 0.09
UBP2Q01476 RTC3YHR087W 336 nt15.3■□□□□ 0.04
UBP2Q01476 TRN1tP(UGG)A 72 nt15.23■□□□□ 0.03
UBP2Q01476 SUF9tP(UGG)F 72 nt15.23■□□□□ 0.03
UBP2Q01476 SUF8tP(UGG)H 72 nt15.23■□□□□ 0.03
UBP2Q01476 tP(UGG)LtP(UGG)L 72 nt15.23■□□□□ 0.03
UBP2Q01476 SUF7tP(UGG)M 72 nt15.23■□□□□ 0.03
UBP2Q01476 tP(UGG)N1tP(UGG)N1 72 nt15.23■□□□□ 0.03
UBP2Q01476 tP(UGG)N2tP(UGG)N2 72 nt15.23■□□□□ 0.03
UBP2Q01476 tP(UGG)O1tP(UGG)O1 72 nt15.23■□□□□ 0.03
UBP2Q01476 SUF11tP(UGG)O2 72 nt15.23■□□□□ 0.03
UBP2Q01476 SCS3YGL126W 1143 nt15.13■□□□□ 0.01
UBP2Q01476 CCC1YLR220W 969 nt15.08■□□□□ 0
UBP2Q01476 SSA3YBL075C 1950 nt15.02□□□□□ -0.01
UBP2Q01476 RVS167YDR388W 1449 nt14.81□□□□□ -0.04
UBP2Q01476 YOL085CYOL085C 342 nt14.69□□□□□ -0.06
UBP2Q01476 PUT4YOR348C 1884 nt14.68□□□□□ -0.06
UBP2Q01476 SCJ1YMR214W 1134 nt14.68□□□□□ -0.06
UBP2Q01476 RPP1BYDL130W 321 nt14.67□□□□□ -0.06
UBP2Q01476 PKP1YIL042C 1185 nt14.54□□□□□ -0.08
UBP2Q01476 ARE1YCR048W 1833 nt14.25□□□□□ -0.13
UBP2Q01476 tP(UGG)O3tP(UGG)O3 72 nt14.24□□□□□ -0.13
UBP2Q01476 SHR5YOL110W 714 nt14.2□□□□□ -0.14
UBP2Q01476 POA1YBR022W 534 nt14.18□□□□□ -0.14
UBP2Q01476 URN1YPR152C 1398 nt14.15□□□□□ -0.14
UBP2Q01476 SAH1YER043C 1350 nt14.11□□□□□ -0.15
UBP2Q01476 PET122YER153C 765 nt14.09□□□□□ -0.15
UBP2Q01476 YHR049C-AYHR049C-A 297 nt14.05□□□□□ -0.16
UBP2Q01476 OPI9YLR338W 858 nt14.05□□□□□ -0.16
UBP2Q01476 DEP1YAL013W 1218 nt14□□□□□ -0.17
UBP2Q01476 BSC6YOL137W 1494 nt13.96□□□□□ -0.17
UBP2Q01476 YDJ1YNL064C 1230 nt13.77□□□□□ -0.21
UBP2Q01476 RPN10YHR200W 807 nt13.76□□□□□ -0.21
UBP2Q01476 SCR1SCR1 522 nt13.76□□□□□ -0.21
UBP2Q01476 SPT5YML010W 3192 nt13.75□□□□□ -0.21
UBP2Q01476 YNL208WYNL208W 600 nt13.69□□□□□ -0.22
UBP2Q01476 BUD23YCR047C 828 nt13.68□□□□□ -0.22
UBP2Q01476 RRN5YLR141W 1092 nt13.65□□□□□ -0.22
UBP2Q01476 PUN1YLR414C 792 nt13.61□□□□□ -0.23
UBP2Q01476 PTC2YER089C 1395 nt13.57□□□□□ -0.24
UBP2Q01476 GAR1YHR089C 618 nt13.56□□□□□ -0.24
UBP2Q01476 SSA4YER103W 1929 nt13.49□□□□□ -0.25
UBP2Q01476 YJR018WYJR018W 363 nt13.46□□□□□ -0.25
UBP2Q01476 NAB2YGL122C 1578 nt13.45□□□□□ -0.26
UBP2Q01476 ATS1YAL020C 1002 nt13.39□□□□□ -0.27
UBP2Q01476 YER088W-BYER088W-B 147 nt13.36□□□□□ -0.27
UBP2Q01476 FIS1YIL065C 468 nt13.21□□□□□ -0.29
UBP2Q01476 YGR139WYGR139W 339 nt13.19□□□□□ -0.3
UBP2Q01476 YJR120WYJR120W 351 nt13.18□□□□□ -0.3
UBP2Q01476 RSB1YOR049C 1065 nt13.17□□□□□ -0.3
UBP2Q01476 MEP2YNL142W 1500 nt13.17□□□□□ -0.3
UBP2Q01476 DAL1YIR027C 1383 nt13.17□□□□□ -0.3
UBP2Q01476 TIR1YER011W 765 nt13.12□□□□□ -0.31
UBP2Q01476 FPR4YLR449W 1179 nt13.12□□□□□ -0.31
UBP2Q01476 SSA1YAL005C 1929 nt13.09□□□□□ -0.31
UBP2Q01476 PHO4YFR034C 939 nt13.05□□□□□ -0.32
UBP2Q01476 INM2YDR287W 879 nt13.04□□□□□ -0.32
UBP2Q01476 BDF1YLR399C 2061 nt13.04□□□□□ -0.32
UBP2Q01476 RPP2BYDR382W 333 nt13.01□□□□□ -0.33
UBP2Q01476 YPS1YLR120C 1710 nt13□□□□□ -0.33
UBP2Q01476 DCW1YKL046C 1350 nt12.97□□□□□ -0.33
UBP2Q01476 YHR165W-AYHR165W-A 312 nt12.87□□□□□ -0.35
UBP2Q01476 TAT1YBR069C 1860 nt12.84□□□□□ -0.35
UBP2Q01476 YDR095CYDR095C 411 nt12.83□□□□□ -0.36
UBP2Q01476 YBL100CYBL100C 315 nt12.82□□□□□ -0.36
UBP2Q01476 Q0182Q0182 405 nt12.81□□□□□ -0.36
UBP2Q01476 SRB2YHR041C 633 nt12.81□□□□□ -0.36
UBP2Q01476 EMI2YDR516C 1503 nt12.77□□□□□ -0.37
UBP2Q01476 YBR220CYBR220C 1683 nt12.72□□□□□ -0.37
UBP2Q01476 MOT3YMR070W 1473 nt12.72□□□□□ -0.37
UBP2Q01476 BDH2YAL061W 1254 nt12.69□□□□□ -0.38
UBP2Q01476 YMR090WYMR090W 684 nt12.68□□□□□ -0.38
UBP2Q01476 FUN26YAL022C 1554 nt12.67□□□□□ -0.38
UBP2Q01476 CAC2YML102W 1407 nt12.63□□□□□ -0.39
UBP2Q01476 PTP1YDL230W 1008 nt12.63□□□□□ -0.39
UBP2Q01476 YDL221WYDL221W 552 nt12.61□□□□□ -0.39
UBP2Q01476 RPP2AYOL039W 321 nt12.59□□□□□ -0.39
UBP2Q01476 SDH1YKL148C 1923 nt12.58□□□□□ -0.4
UBP2Q01476 ALF1YNL148C 765 nt12.57□□□□□ -0.4
UBP2Q01476 TRM9YML014W 840 nt12.54□□□□□ -0.4
UBP2Q01476 PST2YDR032C 597 nt12.51□□□□□ -0.41
UBP2Q01476 WWM1YFL010C 636 nt12.48□□□□□ -0.41
UBP2Q01476 CCT6YDR188W 1641 nt12.44□□□□□ -0.42
UBP2Q01476 SIS1YNL007C 1059 nt12.44□□□□□ -0.42
UBP2Q01476 IRC15YPL017C 1500 nt12.43□□□□□ -0.42
UBP2Q01476 LSM3YLR438C-A 270 nt12.42□□□□□ -0.42
UBP2Q01476 SCC4YER147C 1875 nt12.42□□□□□ -0.42
UBP2Q01476 SUF2tP(AGG)C 72 nt12.35□□□□□ -0.43
UBP2Q01476 SUF10tP(AGG)N 72 nt12.35□□□□□ -0.43
UBP2Q01476 GIS3YLR094C 1509 nt12.35□□□□□ -0.43
Retrieved 100 of 7,029 protein–RNA pairs in 14.1 ms