Protein–RNA interactions for Protein: P38925

SMF1, Manganese transporter SMF1, yeastyeast

Predictions only

Length 575 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
SMF1P38925 NSR1YGR159C 1245 nt21.46■■□□□ 1.03
SMF1P38925 YML009W-BYML009W-B 477 nt21.24■□□□□ 0.99
SMF1P38925 NOP1YDL014W 984 nt20.41■□□□□ 0.86
SMF1P38925 MDJ1YFL016C 1536 nt19.54■□□□□ 0.72
SMF1P38925 YKL036CYKL036C 393 nt18.45■□□□□ 0.54
SMF1P38925 YJL027CYJL027C 417 nt17.92■□□□□ 0.46
SMF1P38925 SRX1YKL086W 384 nt17.87■□□□□ 0.45
SMF1P38925 Q0297Q0297 156 nt17.77■□□□□ 0.44
SMF1P38925 DBP2YNL112W 1641 nt17.14■□□□□ 0.33
SMF1P38925 YCR051WYCR051W 669 nt16.92■□□□□ 0.3
SMF1P38925 YBR190WYBR190W 312 nt16.72■□□□□ 0.27
SMF1P38925 SCS3YGL126W 1143 nt16.61■□□□□ 0.25
SMF1P38925 TRN1tP(UGG)A 72 nt16.44■□□□□ 0.22
SMF1P38925 SUF9tP(UGG)F 72 nt16.44■□□□□ 0.22
SMF1P38925 SUF8tP(UGG)H 72 nt16.44■□□□□ 0.22
SMF1P38925 tP(UGG)LtP(UGG)L 72 nt16.44■□□□□ 0.22
SMF1P38925 SUF7tP(UGG)M 72 nt16.44■□□□□ 0.22
SMF1P38925 tP(UGG)N1tP(UGG)N1 72 nt16.44■□□□□ 0.22
SMF1P38925 tP(UGG)N2tP(UGG)N2 72 nt16.44■□□□□ 0.22
SMF1P38925 tP(UGG)O1tP(UGG)O1 72 nt16.44■□□□□ 0.22
SMF1P38925 SUF11tP(UGG)O2 72 nt16.44■□□□□ 0.22
SMF1P38925 RTC3YHR087W 336 nt16.32■□□□□ 0.2
SMF1P38925 CCC1YLR220W 969 nt16.28■□□□□ 0.2
SMF1P38925 YOL085CYOL085C 342 nt16.04■□□□□ 0.16
SMF1P38925 RPP1BYDL130W 321 nt15.94■□□□□ 0.14
SMF1P38925 RVS167YDR388W 1449 nt15.88■□□□□ 0.13
SMF1P38925 PKP1YIL042C 1185 nt15.88■□□□□ 0.13
SMF1P38925 SCJ1YMR214W 1134 nt15.84■□□□□ 0.13
SMF1P38925 SSA3YBL075C 1950 nt15.62■□□□□ 0.09
SMF1P38925 PUT4YOR348C 1884 nt15.58■□□□□ 0.08
SMF1P38925 tP(UGG)O3tP(UGG)O3 72 nt15.41■□□□□ 0.06
SMF1P38925 PET122YER153C 765 nt15.32■□□□□ 0.04
SMF1P38925 SHR5YOL110W 714 nt15.27■□□□□ 0.04
SMF1P38925 ARE1YCR048W 1833 nt15.17■□□□□ 0.02
SMF1P38925 URN1YPR152C 1398 nt15.13■□□□□ 0.01
SMF1P38925 SAH1YER043C 1350 nt15.06■□□□□ 0
SMF1P38925 DEP1YAL013W 1218 nt15.04■□□□□ -0
SMF1P38925 POA1YBR022W 534 nt15.04■□□□□ -0
SMF1P38925 OPI9YLR338W 858 nt15□□□□□ -0.01
SMF1P38925 SCR1SCR1 522 nt14.95□□□□□ -0.02
SMF1P38925 YHR049C-AYHR049C-A 297 nt14.94□□□□□ -0.02
SMF1P38925 ATS1YAL020C 1002 nt14.9□□□□□ -0.02
SMF1P38925 YDJ1YNL064C 1230 nt14.88□□□□□ -0.03
SMF1P38925 RRN5YLR141W 1092 nt14.83□□□□□ -0.04
SMF1P38925 BSC6YOL137W 1494 nt14.8□□□□□ -0.04
SMF1P38925 RPN10YHR200W 807 nt14.73□□□□□ -0.05
SMF1P38925 YNL208WYNL208W 600 nt14.69□□□□□ -0.06
SMF1P38925 GAR1YHR089C 618 nt14.65□□□□□ -0.06
SMF1P38925 BUD23YCR047C 828 nt14.55□□□□□ -0.08
SMF1P38925 YER088W-BYER088W-B 147 nt14.54□□□□□ -0.08
SMF1P38925 SPT5YML010W 3192 nt14.52□□□□□ -0.08
SMF1P38925 PUN1YLR414C 792 nt14.52□□□□□ -0.09
SMF1P38925 PTC2YER089C 1395 nt14.47□□□□□ -0.09
SMF1P38925 YJR018WYJR018W 363 nt14.4□□□□□ -0.1
SMF1P38925 RSB1YOR049C 1065 nt14.36□□□□□ -0.11
SMF1P38925 NAB2YGL122C 1578 nt14.32□□□□□ -0.12
SMF1P38925 YJR120WYJR120W 351 nt14.18□□□□□ -0.14
SMF1P38925 TIR1YER011W 765 nt14.17□□□□□ -0.14
SMF1P38925 SSA4YER103W 1929 nt14.15□□□□□ -0.14
SMF1P38925 SSA1YAL005C 1929 nt14.14□□□□□ -0.15
SMF1P38925 FIS1YIL065C 468 nt14.12□□□□□ -0.15
SMF1P38925 DAL1YIR027C 1383 nt14.05□□□□□ -0.16
SMF1P38925 FPR4YLR449W 1179 nt14.01□□□□□ -0.17
SMF1P38925 PHO4YFR034C 939 nt13.94□□□□□ -0.18
SMF1P38925 RPP2BYDR382W 333 nt13.93□□□□□ -0.18
SMF1P38925 MEP2YNL142W 1500 nt13.93□□□□□ -0.18
SMF1P38925 INM2YDR287W 879 nt13.91□□□□□ -0.18
SMF1P38925 SRB2YHR041C 633 nt13.9□□□□□ -0.18
SMF1P38925 YPS1YLR120C 1710 nt13.84□□□□□ -0.19
SMF1P38925 DCW1YKL046C 1350 nt13.75□□□□□ -0.21
SMF1P38925 PST2YDR032C 597 nt13.75□□□□□ -0.21
SMF1P38925 YBL100CYBL100C 315 nt13.74□□□□□ -0.21
SMF1P38925 YHR165W-AYHR165W-A 312 nt13.68□□□□□ -0.22
SMF1P38925 BDF1YLR399C 2061 nt13.68□□□□□ -0.22
SMF1P38925 YDR095CYDR095C 411 nt13.66□□□□□ -0.22
SMF1P38925 BDH2YAL061W 1254 nt13.63□□□□□ -0.23
SMF1P38925 FUN26YAL022C 1554 nt13.58□□□□□ -0.24
SMF1P38925 EMI2YDR516C 1503 nt13.52□□□□□ -0.25
SMF1P38925 WWM1YFL010C 636 nt13.51□□□□□ -0.25
SMF1P38925 TAT1YBR069C 1860 nt13.46□□□□□ -0.25
SMF1P38925 PTP1YDL230W 1008 nt13.46□□□□□ -0.25
SMF1P38925 CAC2YML102W 1407 nt13.44□□□□□ -0.26
SMF1P38925 YBR220CYBR220C 1683 nt13.44□□□□□ -0.26
SMF1P38925 TRM9YML014W 840 nt13.43□□□□□ -0.26
SMF1P38925 ALF1YNL148C 765 nt13.42□□□□□ -0.26
SMF1P38925 RPP2AYOL039W 321 nt13.4□□□□□ -0.26
SMF1P38925 YDL221WYDL221W 552 nt13.38□□□□□ -0.27
SMF1P38925 YKL097CYKL097C 411 nt13.37□□□□□ -0.27
SMF1P38925 YMR090WYMR090W 684 nt13.37□□□□□ -0.27
SMF1P38925 LSM3YLR438C-A 270 nt13.35□□□□□ -0.27
SMF1P38925 CCT6YDR188W 1641 nt13.35□□□□□ -0.27
SMF1P38925 SDH1YKL148C 1923 nt13.31□□□□□ -0.28
SMF1P38925 SHU1YHL006C 453 nt13.3□□□□□ -0.28
SMF1P38925 SIS1YNL007C 1059 nt13.28□□□□□ -0.28
SMF1P38925 YAL037C-BYAL037C-B 975 nt13.25□□□□□ -0.29
SMF1P38925 YFL021C-AYFL021C-A 855 nt13.24□□□□□ -0.29
SMF1P38925 IRC15YPL017C 1500 nt13.23□□□□□ -0.29
SMF1P38925 YGR021WYGR021W 873 nt13.21□□□□□ -0.29
SMF1P38925 HOM6YJR139C 1080 nt13.21□□□□□ -0.29
SMF1P38925 SUF2tP(AGG)C 72 nt13.2□□□□□ -0.3
Retrieved 100 of 7,029 protein–RNA pairs in 17.9 ms