Protein–RNA interactions for Protein: P10963

PCK1, Phosphoenolpyruvate carboxykinase (ATP), yeastyeast

Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (RIP-Chip)
Gene UniProt Accession Gene Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score Detected Interaction
PCK1P10963 YML009W-BYML009W-B 477 nt22.51■■□□□ 1.19
PCK1P10963 NSR1YGR159C 1245 nt22.31■■□□□ 1.16
PCK1P10963 NOP1YDL014W 984 nt21.88■■□□□ 1.09
PCK1P10963 YKL036CYKL036C 393 nt20.2■□□□□ 0.82
PCK1P10963 MDJ1YFL016C 1536 nt19.82■□□□□ 0.76
PCK1P10963 Q0297Q0297 156 nt19.12■□□□□ 0.65
PCK1P10963 SRX1YKL086W 384 nt19.09■□□□□ 0.65
PCK1P10963 YJL027CYJL027C 417 nt18.88■□□□□ 0.61
PCK1P10963 SCS3YGL126W 1143 nt18.38■□□□□ 0.53
PCK1P10963 YCR051WYCR051W 669 nt18.17■□□□□ 0.5
PCK1P10963 DBP2YNL112W 1641 nt17.49■□□□□ 0.39
PCK1P10963 YOL085CYOL085C 342 nt17.48■□□□□ 0.39
PCK1P10963 PKP1YIL042C 1185 nt17.25■□□□□ 0.35
PCK1P10963 TRN1tP(UGG)A 72 nt17.24■□□□□ 0.35
PCK1P10963 SUF9tP(UGG)F 72 nt17.24■□□□□ 0.35
PCK1P10963 SUF8tP(UGG)H 72 nt17.24■□□□□ 0.35
PCK1P10963 tP(UGG)LtP(UGG)L 72 nt17.24■□□□□ 0.35
PCK1P10963 SUF7tP(UGG)M 72 nt17.24■□□□□ 0.35
PCK1P10963 tP(UGG)N1tP(UGG)N1 72 nt17.24■□□□□ 0.35
PCK1P10963 tP(UGG)N2tP(UGG)N2 72 nt17.24■□□□□ 0.35
PCK1P10963 tP(UGG)O1tP(UGG)O1 72 nt17.24■□□□□ 0.35
PCK1P10963 SUF11tP(UGG)O2 72 nt17.24■□□□□ 0.35
PCK1P10963 RPP1BYDL130W 321 nt17.18■□□□□ 0.34
PCK1P10963 CCC1YLR220W 969 nt17.13■□□□□ 0.33
PCK1P10963 YBR190WYBR190W 312 nt16.87■□□□□ 0.29
PCK1P10963 RTC3YHR087W 336 nt16.56■□□□□ 0.24
PCK1P10963 RVS167YDR388W 1449 nt16.52■□□□□ 0.23
PCK1P10963 ATS1YAL020C 1002 nt16.44■□□□□ 0.22
PCK1P10963 PET122YER153C 765 nt16.41■□□□□ 0.22
PCK1P10963 SCJ1YMR214W 1134 nt16.4■□□□□ 0.22
PCK1P10963 tP(UGG)O3tP(UGG)O3 72 nt16.34■□□□□ 0.21
PCK1P10963 SCR1SCR1 522 nt16.27■□□□□ 0.2
PCK1P10963 RRN5YLR141W 1092 nt15.95■□□□□ 0.14
PCK1P10963 SHR5YOL110W 714 nt15.92■□□□□ 0.14
PCK1P10963 YDJ1YNL064C 1230 nt15.78■□□□□ 0.12
PCK1P10963 RSB1YOR049C 1065 nt15.65■□□□□ 0.1
PCK1P10963 YER088W-BYER088W-B 147 nt15.63■□□□□ 0.09
PCK1P10963 DEP1YAL013W 1218 nt15.5■□□□□ 0.07
PCK1P10963 GAR1YHR089C 618 nt15.48■□□□□ 0.07
PCK1P10963 URN1YPR152C 1398 nt15.48■□□□□ 0.07
PCK1P10963 PUT4YOR348C 1884 nt15.27■□□□□ 0.04
PCK1P10963 RPN10YHR200W 807 nt15.27■□□□□ 0.04
PCK1P10963 YNL208WYNL208W 600 nt15.24■□□□□ 0.03
PCK1P10963 OPI9YLR338W 858 nt15.22■□□□□ 0.03
PCK1P10963 PST2YDR032C 597 nt15.2■□□□□ 0.02
PCK1P10963 SAH1YER043C 1350 nt15.13■□□□□ 0.01
PCK1P10963 ARE1YCR048W 1833 nt15.02■□□□□ -0
PCK1P10963 TIR1YER011W 765 nt14.94□□□□□ -0.02
PCK1P10963 YHR049C-AYHR049C-A 297 nt14.86□□□□□ -0.03
PCK1P10963 POA1YBR022W 534 nt14.85□□□□□ -0.03
PCK1P10963 PUN1YLR414C 792 nt14.8□□□□□ -0.04
PCK1P10963 YJR018WYJR018W 363 nt14.76□□□□□ -0.05
PCK1P10963 SSA1YAL005C 1929 nt14.73□□□□□ -0.05
PCK1P10963 YKL097CYKL097C 411 nt14.65□□□□□ -0.06
PCK1P10963 PTC2YER089C 1395 nt14.61□□□□□ -0.07
PCK1P10963 SHU1YHL006C 453 nt14.6□□□□□ -0.07
PCK1P10963 BUD23YCR047C 828 nt14.56□□□□□ -0.08
PCK1P10963 BSC6YOL137W 1494 nt14.51□□□□□ -0.09
PCK1P10963 RPP2BYDR382W 333 nt14.5□□□□□ -0.09
PCK1P10963 YJR120WYJR120W 351 nt14.49□□□□□ -0.09
PCK1P10963 SRB2YHR041C 633 nt14.47□□□□□ -0.09
PCK1P10963 NAB2YGL122C 1578 nt14.41□□□□□ -0.1
PCK1P10963 YAL037C-BYAL037C-B 975 nt14.4□□□□□ -0.1
PCK1P10963 WWM1YFL010C 636 nt14.29□□□□□ -0.12
PCK1P10963 FPR4YLR449W 1179 nt14.26□□□□□ -0.13
PCK1P10963 DAL1YIR027C 1383 nt14.23□□□□□ -0.13
PCK1P10963 INM2YDR287W 879 nt14.23□□□□□ -0.13
PCK1P10963 YGR021WYGR021W 873 nt14.21□□□□□ -0.13
PCK1P10963 FIS1YIL065C 468 nt14.2□□□□□ -0.14
PCK1P10963 BDH2YAL061W 1254 nt14.18□□□□□ -0.14
PCK1P10963 HOM6YJR139C 1080 nt14.14□□□□□ -0.15
PCK1P10963 YBL100CYBL100C 315 nt14.11□□□□□ -0.15
PCK1P10963 PHO4YFR034C 939 nt14.1□□□□□ -0.15
PCK1P10963 MNP1YGL068W 585 nt14.1□□□□□ -0.15
PCK1P10963 SSA3YBL075C 1950 nt14.1□□□□□ -0.15
PCK1P10963 YFL021C-AYFL021C-A 855 nt14.05□□□□□ -0.16
PCK1P10963 YOR139CYOR139C 393 nt14.03□□□□□ -0.16
PCK1P10963 LSM3YLR438C-A 270 nt13.99□□□□□ -0.17
PCK1P10963 NPL3YDR432W 1245 nt13.96□□□□□ -0.17
PCK1P10963 RKM5YLR137W 1104 nt13.94□□□□□ -0.18
PCK1P10963 FUN26YAL022C 1554 nt13.93□□□□□ -0.18
PCK1P10963 TRM9YML014W 840 nt13.93□□□□□ -0.18
PCK1P10963 YOL037CYOL037C 354 nt13.86□□□□□ -0.19
PCK1P10963 YPS1YLR120C 1710 nt13.79□□□□□ -0.2
PCK1P10963 ALF1YNL148C 765 nt13.76□□□□□ -0.21
PCK1P10963 CCT6YDR188W 1641 nt13.75□□□□□ -0.21
PCK1P10963 YDR095CYDR095C 411 nt13.71□□□□□ -0.21
PCK1P10963 YHR165W-AYHR165W-A 312 nt13.69□□□□□ -0.22
PCK1P10963 SPT5YML010W 3192 nt13.67□□□□□ -0.22
PCK1P10963 SUF2tP(AGG)C 72 nt13.66□□□□□ -0.22
PCK1P10963 SUF10tP(AGG)N 72 nt13.66□□□□□ -0.22
PCK1P10963 MEP2YNL142W 1500 nt13.59□□□□□ -0.23
PCK1P10963 YLR281CYLR281C 468 nt13.53□□□□□ -0.24
PCK1P10963 WHI5YOR083W 888 nt13.5□□□□□ -0.25
PCK1P10963 SIS1YNL007C 1059 nt13.49□□□□□ -0.25
PCK1P10963 tM(CAU)CtM(CAU)C 72 nt13.48□□□□□ -0.25
PCK1P10963 IMT4tM(CAU)E 72 nt13.48□□□□□ -0.25
PCK1P10963 IMT3tM(CAU)J3 72 nt13.48□□□□□ -0.25
PCK1P10963 IMT1tM(CAU)O1 72 nt13.48□□□□□ -0.25
PCK1P10963 IMT2tM(CAU)P 72 nt13.48□□□□□ -0.25
Retrieved 100 of 7,029 protein–RNA pairs in 12.4 ms