RNA–Protein interactions for RNA: ENSMUST00000188587.6

Col6a3-208, Transcript of Collagen, type VI, alpha 3, mousemouse

TSL 5 BASIC

Gene Col6a3, Length 8,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col6a3-208ENSMUST00000188587 P04940 107 aa9.72□□□□□ -0.85
Col6a3-208ENSMUST00000188587 P04941 107 aa9.72□□□□□ -0.85
Col6a3-208ENSMUST00000188587 Gm17324Q8C6J8 137 aa9.72□□□□□ -0.85
Col6a3-208ENSMUST00000188587 Trav13d-4A0A0G2JFX3 110 aa9.72□□□□□ -0.85
Col6a3-208ENSMUST00000188587 9530003J23RikQ8BM26 151 aa9.72□□□□□ -0.85
Col6a3-208ENSMUST00000188587 Klk12B2RVZ0 247 aa9.72□□□□□ -0.85
Col6a3-208ENSMUST00000188587 Glrp1E9Q9S8 174 aa9.72□□□□□ -0.85
Col6a3-208ENSMUST00000188587 Psmb11Q8BG41 302 aa9.71□□□□□ -0.85
Col6a3-208ENSMUST00000188587 CrygdP04342 174 aa9.71□□□□□ -0.85
Col6a3-208ENSMUST00000188587 Gtsf1Q9DAN6 167 aa9.71□□□□□ -0.85
Col6a3-208ENSMUST00000188587 Ighv1-62-2A0A0A6YXZ4 119 aa9.71□□□□□ -0.85
Col6a3-208ENSMUST00000188587 Vopp1Q8R1C3 172 aa9.71□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Rnase1P00683 149 aa9.71□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Spink10Q8CAC8 162 aa9.71□□□□□ -0.86
Col6a3-208ENSMUST00000188587 9430069I07RikQ9CX21 111 aa9.71□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Rbmy1bQ60990 380 aa9.71□□□□□ -0.86
Col6a3-208ENSMUST00000188587 1500011B03RikQ3TTH7 73 aa9.7□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Brk1Q91VR8 75 aa9.7□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Vpreb3D3Z6J4 130 aa9.7□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Q8C708 225 aa9.7□□□□□ -0.86
Col6a3-208ENSMUST00000188587 P01630 113 aa9.7□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Spry2Q9QXV8 315 aa9.7□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Gm9936Q8C864 160 aa9.69□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Znf672Q99LH4 468 aa9.69□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Oxld1Q9CR10 201 aa9.69□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Naa38Q9D2U5 125 aa9.69□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Rspo1Q9Z132 265 aa9.69□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Trav4d-3A0A075B625 110 aa9.69□□□□□ -0.86
Col6a3-208ENSMUST00000188587 FshbQ60687 130 aa9.68□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Gm10638F6QEG2 257 aa9.68□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Vsig4F6TUL9 280 aa9.68□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Klhdc3Q8VEM9 382 aa9.68□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Wfdc2Q9DAU7 174 aa9.68□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Wfdc15bQ9JHY4 80 aa9.68□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Nxph4G3X9N5 304 aa9.68□□□□□ -0.86
Col6a3-208ENSMUST00000188587 PscaP57096 123 aa9.68□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Tmem223Q9CQE2 199 aaKnown RBP9.68□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Trbv13-1A0A0B4J1P8 112 aa9.67□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Fam19a1Q7TPG8 133 aa9.67□□□□□ -0.86
Col6a3-208ENSMUST00000188587 ColqO35348 457 aa9.67□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Zfyve26Q5DU37 2529 aa9.67□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Igkv2-109A0A075B5K6 120 aa9.67□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Trav9n-4A0A075B631 113 aa9.67□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Gm10647E9Q8X0 124 aa9.67□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Sh2d1aO88890 126 aa9.66□□□□□ -0.86
Col6a3-208ENSMUST00000188587 4930470P17RikQ9D542 155 aa9.66□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Ighv1-53A0A075B5W3 117 aa9.66□□□□□ -0.86
Col6a3-208ENSMUST00000188587 P01748 117 aa9.66□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Tnfrsf13bQ9ET35 249 aa9.66□□□□□ -0.86
Col6a3-208ENSMUST00000188587 SvipQ3UZP4 77 aa9.66□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Lrrk2Q5S006 2527 aa9.66□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Ighv2-7A0A075B5Q8 116 aa9.66□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Rspo3Q2TJ95 277 aa9.66□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Gm4707V9GXN5 68 aa9.66□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Ighv1-62-1A0A075B5U3 116 aa9.65□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Trav12-3A0A075B648 115 aa9.65□□□□□ -0.86
Col6a3-208ENSMUST00000188587 1810032O08RikE9PZV8 113 aa9.65□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Rpl39P62892 51 aa9.65□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Mrpl35Q9CQL6 188 aa9.65□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Trav13-2A0A075B649 110 aa9.65□□□□□ -0.86
Col6a3-208ENSMUST00000188587 Smim20D3Z7Q2 69 aa9.65□□□□□ -0.86
Col6a3-208ENSMUST00000188587 P04942 107 aa9.65□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Foxi2Q3I5G5 311 aa9.65□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Lhfpl1Q80SV1 220 aa9.65□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Nsun4C4P6S0 806 aaKnown RBP9.65□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Igkv4-92A0A0B4J1I2 117 aa9.64□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Gm15557A6PWY0 234 aa9.64□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Clec4b2Q67DU8 208 aa9.64□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Trav13-4-dv7A0A075B6C2 110 aa9.64□□□□□ -0.87
Col6a3-208ENSMUST00000188587 9230109A22RikQ8BHE6 111 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 5730596B20RikQ8BQ08 205 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Hivep2Q3UHF7 2430 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Tfpi2O35536 230 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 AngP21570 145 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Gp9O88186 177 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Igkv1-35A0A0G2JDE5 120 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 E130114P18RikF6S0S7 154 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Cdpf1Q8R3A2 119 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Col4a4Q9QZR9 1682 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Ighv1-11A0A0A6YWI9 117 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Trav13n-1A0A0G2JEU8 110 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Fxyd5P97808 178 aa9.63□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Trav11A0A0B4J1J9 114 aa9.62□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Defb13Q8R2I4 64 aa9.62□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Trbv16A0A0B4J1H3 115 aa9.61□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Trav13d-1A0A075B606 110 aa9.61□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Tcl1b3P56842 122 aa9.61□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Gm10295Q8CCF3 114 aa9.61□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Trav7-6A0A075B640 112 aa9.61□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Gm15217A2CG07 155 aa9.61□□□□□ -0.87
Col6a3-208ENSMUST00000188587 NrgnP60761 78 aa9.61□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Trav13n-2A0A0G2JF93 110 aa9.61□□□□□ -0.87
Col6a3-208ENSMUST00000188587 P04945 108 aa9.6□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Gm14137Q8CE97 175 aa9.6□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Gm10542F6XDR3 90 aa9.6□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Hrct1Q9D6B9 109 aa9.6□□□□□ -0.87
Col6a3-208ENSMUST00000188587 B230359F08RikA0A0B4J1K3 109 aa9.6□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Gm17521F6QAC8 156 aa9.6□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Gphb5Q812B2 130 aa9.59□□□□□ -0.87
Col6a3-208ENSMUST00000188587 Igkv8-30A0A140T8M3 121 aa9.59□□□□□ -0.87
Retrieved 100 of 22,080 RNA–protein pairs in 23.7 ms